Gene

KWMTBOMO02259

Pre Gene Modal

BGIBMGA003060

Annotation

cuticular_protein_RR-2_motif_65_precursor_[Bombyx_mori]

Location

Bomo_Chr4(+):15364542-15365784      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 3.132

CDS

ATGATGCAAAAGATCACCTTTTTTTCTGGACTGATCCTGTCAGCAACTTGCATGGTGTTGCACCAGCAACAGCCACTGATACCGCAGGTTCAATATGACAATCCGAATTACAACTTCGCGTATGACGTCAACGACGACTATACCGGGGATATCAAGAGTCAGCAGGAAAGCAGACGAGGTGACACTGTATTGGGCCAGTATTCTTTGCTTCAACCGGACGGAATCAGGAGAACTGTGGATTACAGAGCCGACGACCACGCTGGTTTCCAAGCTAATGTCAACAGCCAAGGCCTACCTGTATCCCAACATGCCAATGTTGGCTATCCTGCTTCGGATCCTCAACTGAATCAAGTCTACCAACATGCAACCCCAACCTCTTCTCCAATCCCAGTAGCAGTATCTAGGACATCGTATGTTCAGACCATTTCAAGTCATGGACACAATCTGTGGGCTTAA

Protein

MMQKITFFSGLILSATCMVLHQQQPLIPQVQYDNPNYNFAYDVNDDYTGDIKSQQESRRGDTVLGQYSLLQPDGIRRTVDYRADDHAGFQANVNSQGLPVSQHANVGYPASDPQLNQVYQHATPTSSPIPVAVSRTSYVQTISSHGHNLWA

Uniprot

C0H6Q7   A0A2H1VS47   A0A2A4JNL5   A0A0L7LBA7   A0A194PTP4   A0A0N1INP2   + More
A0A0N1I5X6   A0A194PTD9   A0A212EYH2   A0A1W5XG69   B4L0J9   A0A2H1WHI9   A0A182ITR7   C0H6R9   C0H6Y0   C0H6R7   A0A0K8T2A2   A0A0A9XTK3   C0H6R8   B3M795   A0A1W4WEB4   H9IW55   B2DBK4   A0A212FK22   A0A212F3M1   C0H6R3   A0A194RGQ3   A0A212EX99  

Pubmed

19121390    19280704    26227816    26354079    22118469    17994087    + More
25401762    26823975    18712529   

EMBL

BABH01010193    BR000566    FAA00568.1    ODYU01004109    SOQ43637.1    NWSH01001032    + More
PCG73012.1    JTDY01001869    KOB72680.1    KQ459593    KPI96687.1    KQ460940    KPJ10598.1    KPJ10597.1    KPI96686.1    AGBW02011525    OWR46530.1    KY554477    ARH56586.1    CH933809    EDW19168.1    ODYU01008712    SOQ52540.1    BABH01005857    BABH01005858    BR000578    FAA00580.1    BR000639    FAA00641.1    BABH01037875    BR000576    FAA00578.1    GBRD01006330    JAG59491.1    GBHO01020400    GDHC01021919    JAG23204.1    JAP96709.1    BR000577    FAA00579.1    CH902618    EDV38756.1    AB264688    BAG30763.1    AGBW02008159    OWR54088.1    AGBW02010555    OWR48324.1    BABH01011540    BR000572    FAA00574.1    KQ460211    KPJ16505.1    AGBW02011788    OWR46128.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000053268    UP000053240    UP000007151    + More
UP000009192    UP000075880    UP000007801    UP000192223   

PRIDE

C0H6Q7    C0H6R9    C0H6Y0    C0H6R7    C0H6R8    H9IW55    + More
C0H6R3   

Pfam

PF00379   Chitin_bind_4        + More
PF01607   CBM_14

Interpro

IPR000618   Insect_cuticle        + More
IPR031311   CHIT_BIND_RR_consensus       
IPR002557   Chitin-bd_dom       
IPR036508   Chitin-bd_dom_sf       

SUPFAM

SSF57625   SSF57625       

ProteinModelPortal

C0H6Q7   A0A2H1VS47   A0A2A4JNL5   A0A0L7LBA7   A0A194PTP4   A0A0N1INP2   + More
A0A0N1I5X6   A0A194PTD9   A0A212EYH2   A0A1W5XG69   B4L0J9   A0A2H1WHI9   A0A182ITR7   C0H6R9   C0H6Y0   C0H6R7   A0A0K8T2A2   A0A0A9XTK3   C0H6R8   B3M795   A0A1W4WEB4   H9IW55   B2DBK4   A0A212FK22   A0A212F3M1   C0H6R3   A0A194RGQ3   A0A212EX99  

KEGG

100379406    no KO assigned | (RefSeq) CPR65, BmorCPR65; cuticular protein RR-2 motif 65

GO

GO:0042302   GO:0016021   GO:0006030   GO:0005576   GO:0008061   GO:0008270   GO:0007165   GO:0006072   GO:0009331   GO:0005634   GO:0006289   GO:0004518   GO:0006281   GO:0048384  

SignalP

Position:   1 - 22,         Likelihood:  0.799828

 

 

Length:

151

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.30689

Exp number, first 60 AAs:

1.30665

Total prob of N-in:

0.15035

outside

1  -  151

 

 

Pi

35.427648

Theta

36.151252

Tajima's D

-0.438658

CLR

185.221989

CSRT

0.259037048147593

Interpretation

Uncertain