Gene
KWMTBOMO02254
Annotation
reverse_transcriptase_[Danaus_plexippus]
Location in the cell
Mitochondrial Reliability : 1.115 Nuclear Reliability : 1.345
Sequence
CDS
ATGGTCAGACGTGTGGGTCTGTCAGTAATGGCAGACCCCAAGAGGATGAGAAGTGAACCGGAGGGCACTCCCTTCCGGTCGCTGGTTGCCATGTCCCCGGTTGCCTCTTGGCAGCTACAGGGGAAGGCCCTCCAGAGGGGGAGGATCCCTCCGTGCTTCCACCTCGGTGAGAGCACGCTGCCCCGCGTATTCTGGGGGGGCAAAGCTTGCCATGACGAAGGGGGCTGTGTGACGGGCAGCGGAAAACCCGTCGAACAGAGACACGCCAGCGCTGAGTTGACGCACTCTGGGCTCGTCAGTGACAGCGAGGCGGCTGGCTCGAAAGAGACAACCGCCAAAAAGATAAGGCGGAAAAGGAAGACCCAGCGAGTTTCTTCACGCGAGGGGGGAGGGGAGCCAACGTCATCCTCTGGCGCAGATGCCCCGCCGGAGAAGGTTCTGGTAGTCTCCGATGCGGCCTCTGCTGCGGAGGAGATGCCGCCCCCAAAAGGAAGACCCGCCCGGAGGAGGGGCGCGCCGTCACCGGCGCAGTCATCGGCGTCGATGTCTGTCGCCTCACTGGACGGGCGAACGACAGAGGAGGAAGAAGGCGGCCTTCAAGACCCTGCCTTGGTCATAGACAGGGCCATGAGGACCGTCAAGTCATATGCGGCCAACGGCACTAAGACCAAAGCCGCTGGCCGTGGTACAGCTGATGGCGGAGAATTCGAGGCTTCGAGCACTACTTCAAGCCCAACAGCAGCCTCAGCAGCAGATGAGGCTTCTGCTTCGAGGAAGGCAGCGGCGTCGACGCCGTCGCCCGCGTTGCCCCGGGCCACTGGGTTGCGAACTCCACCGGCCCATGTACCGGCAGCGACGTCATGTATCACCGGGGCGCCTCAGAACCGCCGTTCCCCGGCGCTGACTGGTGACGGGTGGCCTGTGCTGCCGCCACCGCGCGCGGCTGAGCAGCGGCCACGTCTCCCGTCGCCGCGCACTAGGGAGATAACCGCTACCAAGCGGCAGCAAGCACTCGTAGGGCCACGGGAGCTGGCTGGAAAATTCAGCCTGGACGAGGTCATCAGTCGCACCGTCCAGGTTGTATTAGAAAGGCTGGACGGCAGGCTGGCGGCCCTCGAGGCGCAGCTCATTGCTCCGGCTGACGCTCGGCGACCGGCATATGCCGCGGTGTCGGGTACTCCAGCCGCTTGCCCCGCCCCCGTACGGGCTCCAGCCACTAGGTTGGGCCCGGGACGGGATAGAACCAAGCGGGGGGGGGGGGGGGGGGCACCAACGCGAAGTGCCCATCGCAAGCACCCCAGCCTCGTCCGCTGCCTCCGCCCCCGTCTAACATGGACGAAGGGTGGAACGTGGTGGCCCGGCGGGGTGCCAAGAAGGCTCCACCAGCAGCTGCACAAGTTGCAACCGCGCACGCCGCGGTCGGCGGCAGTGGTCCCAACGCTGCTGCCGGCTGCCAAAGCCAAGGGCATGACATACGGAGATCTCATTGCTCGGGCGCGCGCGGCAGTTGACCTGGATGAGATCGGGGCGGGGGAGGGCCTCCGCTGTAGGCAGACAGCCAATGGAGCCAAACTGCTAGAATGTCTCGTTGCCGATAGTCCCGGCATCGCGGAGCGTCTGGCGGCAAGGCTCCGTATGGTCCTGCCTGAAGAGGAGGTGCGGGTGCATAGGCCGGTCAAGATGGCCGAATTGAAAGTGACCGGCCTGGACGACTGCACCACCAGGGATGAGGTGGCGGCGGCCGTCGCTGCCCAGGGCAACTGTGCCCTGCAGAACATAACAGTAGGCGAGCTGCGCTCCGGTTATACCGGGGCTGGTTCTGTGTGGGTACGTTGCCCGGTGGAGGCGGCCGTTGCCCTGGCTGCTCCTCCGCCCGGGAGACCGTCGGGGGATCCGGGCAGGTTGCGCGTGGGCTGGATAGCAGCCCACGTGCGCCTGCTAGAACCGCGTGCCTGGCGGTGCCTAAGGTGCTTCAGCACTGGGCACTGCCTCGCCAGGTGCGTGAGTGCGGTTGACCGCAGCGGACTGTGCTTCCGCTGTGGTCAGCCTGGACACAAGGCGGCCGTGTGCTTGGCTGCGCCGCATTGTTCGTTATGTGCGGCGGCCGGACGCAAGGCTGACCACCGGACCGGGGGCAAGGCATGCCCCCCGGCCGGCAAAAATGCAGTTAGAAATTGGCGCCGCCAAGCTAAGCGTCGCCAAAAGAAGCGGGCGGCCGGGGGAGCACCGGCTGGCACTTTGGCCCCCGCTGAGGCGTTCGAGCCCGATAGCGGGGACAATAGAGTAGGGGAGGGGGCGATGGATGTGGTCCAGGACATGCTGCTCCAGACTATGGCGGAGTGGTCAATTGACGTGGCTGTGGTCGCCGAGCCGTACTTCGTTCCCCCAGCGGACGACTGCTGGTTTGGGGAAGTTGATGGCTTGGCGGCCATACATATAAGAAGATCCGCGATGATTCCTCCCCTGGCGATGGTGACCAGGGGCCCCGGGATCGTCGCGGTACAATTAGAAAATACCGTCGTGATCGGGGTGTACTTCTCTCCAAATCGGCCTACCGTTGAGTTCGAGCGGTTTCTGGACGGGCTAGAGGTGATCGCTCGTCACCTCTCTCCCCGTTCGGTAATACTGGCGGGGGACTTCAATGCGAAGTCTGTCGCTTGGGGTTCCCCATCCACGGACGCTCGTGGTAGGCTGTTGGAGGAGTGGGCGGTCGCGGCCGATCTCTGTATCGTTAACAGGGGCTCGGTCGCGACATGCGTGCGGTGGACGGGAGAGTCTATCGTGGACTTGACGTTCGCGAGCTCGTCCATCGCACAGCGCATCCTCGGCTGGGGCGTGGTGGTGGGGGCGGAATCGTTGTCGGATCACCGATATATCCGGTTCGATCTTTCCGCTCCCGCGCCGACGCCGGCCGCAGGCGCTCGCGAGGTTAACCCCCCGCGGAGTGCGTTCCGATCATTCCCTAGGTGGGCATTGAAGCTCCTGAAGAAGGAGCTCCTGGTGGAGGCCTCTATGGTGGCGGCGTGGACGCCCATGCGCCCACACCTTTTCGAATGCGATGCCTCGATGCCCCGGGTCGGCCCTCGGCATTGCGGACGGCGGCAGTCGCCCTGGTGGTCGCCTGAAATTGCGAGATTGCGTGCAGTCTCCATTCGGGCGAGCCGCCAGTGTGCTAGACACCGCCGTCGCCGTCACCTGCGACGCGACGACCCCGTCGCGTTCGCAGAGGAGGAGACCCGGCTGCACGGCGAATATCGCGCTGCGAAGGACGCCCTGCGGCTGGCCATCAGGCGGGTCAAGGAGCAGAACATGGAGAGACTCTTGGAGGCGCTCGAAGCGGATCCATGGGGGAGCCCGTACAGGCTGGTGCGCGGCAAACTGCGCCCGTGGGCCCCCCCTTTGACTGAGCGACTTCAGCCTCAACAGCTGCGGGACATCGTTTCGGCGTTGTTCCCGCAGGAGCGGGAGGGTTTTGTTCCCCCCGCTATGGGTGAGCCGTCGGACGCCATCGACGGCGAAGCCCCTGCTGAGGTGCCCCATATTACTGGGGCAGAGCTCCGTGTGGCCGTTGTCAGGATGACTGCAAAGAACACGGCCCCCGGCCCGGACGGAGTCCATGGTCGGGTGCTGGCCTTGGCCCTCGATGCCCTAGGGGACCGGCTCCTGGAGGTATTTGATGGTTGCCTGGAGTCGGGACGGTTTCCGTTGCTCTGGCGGACGGGCAGACTTGTGCTGTTGAAAAAGGAGGGGCGCCCGGTGGATACAGCCGCCGGGTATCGTCCTATCGTACTGCTGGACGAGGCGGGAAAATTGCTGGAGCGTATTCTAGCTGCCCGCATCGTTCAGCACCTGGTCGGGGTTGGACCTGACCTGTCGGCGGAGCAGTTCGGCTTCCGGGAGGGCCGTTCGACCGTGGATGCAATTCTTCGCGTGCGGGCCCTCTCGGACGAGGCTGTCTCACGGGGTGGGGTGGCGCTGGCGGTGTCTCTTGACATCGCCAACGCATTTAACACCCTGCCCTGGTCTGTGATAGGGGGGGCACTGGAGAGGCATGGGGTGCCCCTCTACCTCCGCCGGCTGGTTGGCTCCTATTTGGAGGCCAGGTCGGTCGAATGTACCGGGTACGGTGGGACCCTTCACCGTTTTCCGGTCGTGCGTGGTGTTCCGCAGGGGTCGGTTCTCGGACCCCTCTTGTGGAACATCGGGTACGACTGGGTGCTGAGGGGTGCCCTCCTCCCGGGTCTCCGCGTTATTTGTTACGCGGACGACACGTTGGTCGTGGCTCGGGGGGATGATTATAGAGAGTCTGCCCGTCTCGCCACAGCGGGAGTGGCCCTCGTCGTCGGGAGGATCAAGAGACTGGGCCTCGACGTGGCGCTCAGTAAATCCGAGGCCTTGTGGTTTCACGGGCCGCGGAGAGCGCCACCTGTCGACGCCCACATCGTGGTTGGGGGCGTCCGGATAGGGGTCGGGGTGCAGTTAAGGTACCTCGGCCTCGTGTTGGACGGCCGGTGGGCTTTTCGTGCTCACTTTGCGGAGCTGGTCCCTCGATTAATGAGGACAGCCGGTTCTTTGAACCGACTGCTCCCGAATATCGGGGGGCCGGATCAGGTTGTACGCCGCCTCTACGCTGGGGTGTTGCGATCGATGGCCCTGTACGGTGCGCCTGTATGGGCTGAGCCGCGCAATCGGGCTACTATGGCTCGGTTCCTGCGCCGGCCGCAGCGCACCGTTGCTATCAGGGTCATCCGTGGATATCGCACCGTCTCATTCGAGGCGGCGTGTGTGTTGGCGGGGACGCCGCCATGGGAGCTGGAGGCGGAGTCGCTCGCTGCCGACTATCGGTGGCGCAGTGAGCTTCGTGCTCTGGGCGTGGCGCGTCCCTCCAAAAGTGAGCTGCGGGCGCGGAAGGCCCATTCTCGGCGGTCCGTGCTCGAATCGTGGTCGAGGCGGTTGGCCAACCCCACGTGGGGTCTACGGACCGTCGAGGCGGTTTACCCGGTCTTTTATGACTGGGTGAATCGTGGCCGAGGACGCCTCACCTTCCGTCTGGTGCAGGTGCTGACTGGGCACGGATGCTTCGGAAAGTACATGCACCGGATAGGAGCTGAGCCGACGACGAGGTGCCACCATTGTGGACACGACCTGGACACGGCGGAGCATACGCTCGCTGTCTGCCCCGCTTGGGAGGTGCAGCGCCGTGTCCTTGTCGCAAAGATAGGACCAGACTTGTCGCTGCCTGGCGTCGTGGCGTCGATGCTTGGCGGCGACGAGTCTTGGAAGGCTATGCTCGACTTCTGCGAGTGCACCATCTCGCAGAAGGAGGCGGCGGGGCGAGTGAGGCAAAGCTCTCCTCACTACGCAGAAACCCGCCGCCGCCGAGCAGGGGGTCGGGACCGGGGTCCCGTCCGTAACCCGGCCCCCTAA
Protein
MVRRVGLSVMADPKRMRSEPEGTPFRSLVAMSPVASWQLQGKALQRGRIPPCFHLGESTLPRVFWGGKACHDEGGCVTGSGKPVEQRHASAELTHSGLVSDSEAAGSKETTAKKIRRKRKTQRVSSREGGGEPTSSSGADAPPEKVLVVSDAASAAEEMPPPKGRPARRRGAPSPAQSSASMSVASLDGRTTEEEEGGLQDPALVIDRAMRTVKSYAANGTKTKAAGRGTADGGEFEASSTTSSPTAASAADEASASRKAAASTPSPALPRATGLRTPPAHVPAATSCITGAPQNRRSPALTGDGWPVLPPPRAAEQRPRLPSPRTREITATKRQQALVGPRELAGKFSLDEVISRTVQVVLERLDGRLAALEAQLIAPADARRPAYAAVSGTPAACPAPVRAPATRLGPGRDRTKRGGGGGAPTRSAHRKHPSLVRCLRPRLTWTKGGTWWPGGVPRRLHQQLHKLQPRTPRSAAVVPTLLPAAKAKGMTYGDLIARARAAVDLDEIGAGEGLRCRQTANGAKLLECLVADSPGIAERLAARLRMVLPEEEVRVHRPVKMAELKVTGLDDCTTRDEVAAAVAAQGNCALQNITVGELRSGYTGAGSVWVRCPVEAAVALAAPPPGRPSGDPGRLRVGWIAAHVRLLEPRAWRCLRCFSTGHCLARCVSAVDRSGLCFRCGQPGHKAAVCLAAPHCSLCAAAGRKADHRTGGKACPPAGKNAVRNWRRQAKRRQKKRAAGGAPAGTLAPAEAFEPDSGDNRVGEGAMDVVQDMLLQTMAEWSIDVAVVAEPYFVPPADDCWFGEVDGLAAIHIRRSAMIPPLAMVTRGPGIVAVQLENTVVIGVYFSPNRPTVEFERFLDGLEVIARHLSPRSVILAGDFNAKSVAWGSPSTDARGRLLEEWAVAADLCIVNRGSVATCVRWTGESIVDLTFASSSIAQRILGWGVVVGAESLSDHRYIRFDLSAPAPTPAAGAREVNPPRSAFRSFPRWALKLLKKELLVEASMVAAWTPMRPHLFECDASMPRVGPRHCGRRQSPWWSPEIARLRAVSIRASRQCARHRRRRHLRRDDPVAFAEEETRLHGEYRAAKDALRLAIRRVKEQNMERLLEALEADPWGSPYRLVRGKLRPWAPPLTERLQPQQLRDIVSALFPQEREGFVPPAMGEPSDAIDGEAPAEVPHITGAELRVAVVRMTAKNTAPGPDGVHGRVLALALDALGDRLLEVFDGCLESGRFPLLWRTGRLVLLKKEGRPVDTAAGYRPIVLLDEAGKLLERILAARIVQHLVGVGPDLSAEQFGFREGRSTVDAILRVRALSDEAVSRGGVALAVSLDIANAFNTLPWSVIGGALERHGVPLYLRRLVGSYLEARSVECTGYGGTLHRFPVVRGVPQGSVLGPLLWNIGYDWVLRGALLPGLRVICYADDTLVVARGDDYRESARLATAGVALVVGRIKRLGLDVALSKSEALWFHGPRRAPPVDAHIVVGGVRIGVGVQLRYLGLVLDGRWAFRAHFAELVPRLMRTAGSLNRLLPNIGGPDQVVRRLYAGVLRSMALYGAPVWAEPRNRATMARFLRRPQRTVAIRVIRGYRTVSFEAACVLAGTPPWELEAESLAADYRWRSELRALGVARPSKSELRARKAHSRRSVLESWSRRLANPTWGLRTVEAVYPVFYDWVNRGRGRLTFRLVQVLTGHGCFGKYMHRIGAEPTTRCHHCGHDLDTAEHTLAVCPAWEVQRRVLVAKIGPDLSLPGVVASMLGGDESWKAMLDFCECTISQKEAAGRVRQSSPHYAETRRRRAGGRDRGPVRNPAP
Summary
Uniprot
EMBL
Proteomes
Interpro
Gene 3D
ProteinModelPortal
PDB
1WDU
E-value=1.59967e-09,
Score=156
Ontologies
GO
Topology
Length:
1808
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01709
Exp number, first 60 AAs:
0.00554
Total prob of N-in:
0.00031
outside
1 - 1808
Population Genetic Test Statistics
Pi
188.548336
Theta
129.950615
Tajima's D
1.106516
CLR
0.441204
CSRT
0.693015349232538
Interpretation
Uncertain
