Gene

KWMTBOMO02244

Pre Gene Modal

BGIBMGA003051

Annotation

PREDICTED:_transcription_factor_Sp3-like_isoform_X3_[Bombyx_mori]

Location

Bomo_Chr4(+):14575126-14578268      View in EpiBrowser

Full name

Glycerol-3-phosphate dehydrogenase      

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 4.856

CDS

ATGCCGAGTCGACCATCAACAACCGGGCAACAAATCCAGCAAGATCCAAATGAGCCGGGCAAGTGGCAGGTGGTGACTGTCAGTACGGCAAGCAGTACTGCAGCATCACCTCAAGAGTGTGAAGCAGCCAAACAAAGAGCAGAAAGCCCCAACTCTTCAAAAAAACACATGAAGCGAGTAGCTTGCACCTGTCCTAACTGTGATCAGGGAGAGAATCGTGTTGTCGACCGCAAGAAACAGCATGTGTGTCACATTGCTGGCTGCAACAAGGTATATGGAAAGACATCTCATTTACGAGCTCATCTCCGTTGGCATTCTGGAGAGAGACCCTTCTTGTGCAATTGGCTGTTTTGTGGAAAAAGGTTCACCAGATCGGATGAATTGCAAAGGCATCGTAGAACACACACAGGGGAGAAACGGTTTGAATGCCCCGAGTGCAGTAAACGTTTCATGAGGTCTGACCACCTTGCCAAACATGTTCGGATCCATACGAAAAATAGAATTACGGAAGTAGCAACATCGACACAATCAATGTACTCTGATTCAGGTGATGATAGTTCAGATGAGAAAATGATGTTGACTATAGAGACCATCCATCCTGAGGGAGAGAGTGAAGATAAGCTTGTCATGATCCGTCCTGGACCAAAGGTTGAACCGGAACAACTGGACAGCTAG

Protein

MPSRPSTTGQQIQQDPNEPGKWQVVTVSTASSTAASPQECEAAKQRAESPNSSKKHMKRVACTCPNCDQGENRVVDRKKQHVCHIAGCNKVYGKTSHLRAHLRWHSGERPFLCNWLFCGKRFTRSDELQRHRRTHTGEKRFECPECSKRFMRSDHLAKHVRIHTKNRITEVATSTQSMYSDSGDDSSDEKMMLTIETIHPEGESEDKLVMIRPGPKVEPEQLDS

Catalytic Activity

a quinone + sn-glycerol 3-phosphate = a quinol + dihydroxyacetone phosphate

Cofactor

FAD

Similarity

Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.

Uniprot

A0A212F3R4   A0A2H1V9P5   A0A2A4J879   A0A1E1W9P0   A0A0N1PFI7   A0A194PMD4   + More
A0A2J7Q7L9   A0A087ZSL2   A0A1W4XN71   A0A1W4XMC4   A0A0L7QSJ1   A0A195CGJ3   A0A1Y1NC89   A0A1Y1NAG0   A0A1Y1N9U2   A0A195DYD5   A0A195AYR5   A0A195F991   T1KBE0   A0A158NPC6   E1ZX10   A0A139WKM3   A0A0M9A7R1   A0A2J7Q7M0   A0A139WKI6   A0A2A3EFE4   A0A154PTC4   T1IUW8   A0A067RE79   A0A0L8HDD4   A0A210PI52   A0A3B4XMZ3   A0A0B7BC17   A0A3P8T5U1   A0A0B7BCG1   A0A0L8HDU1   A0A3B5B3E5   A0A3P9NG07   M4A5Z8   D5GS23   A0A3B5M3M8   A0A2C9K247   A0A1D2NJY1   A0A2C9K267   A0A3P8PGJ9   A0A2C9K248   A0A3Q0D4W5   A0A2C9K249   A0A132AIC7   A0A3P9HZ21   A0A3B4UJK9   A0A3L7HLC7  

EC Number

1.1.5.3

Pubmed

22118469    26354079    28004739    21347285    20798317    18362917    + More
19820115    24845553    28812685    23542700    15562597    27289101    28071753    26555130    17554307    29704459   

EMBL

AGBW02010507    OWR48371.1    ODYU01001400    SOQ37521.1    NWSH01002494    PCG68171.1    + More
GDQN01009851    GDQN01007368    GDQN01006264    GDQN01005918    GDQN01002597    GDQN01001827    JAT81203.1    JAT83686.1    JAT84790.1    JAT85136.1    JAT88457.1    JAT89227.1    KQ461183    KPJ07568.1    KQ459598    KPI94596.1    NEVH01017441    PNF24575.1    KQ414756    KOC61600.1    KQ977791    KYM99849.1    GEZM01009572    JAV94510.1    GEZM01009574    JAV94508.1    GEZM01009573    JAV94509.1    KQ980066    KYN17893.1    KQ976703    KYM77104.1    KQ981727    KYN36777.1    CAEY01001946    ADTU01022312    GL434948    EFN74280.1    KQ971326    KYB28500.1    KQ435718    KOX78960.1    PNF24577.1    KYB28499.1    KZ288266    PBC30204.1    KQ435090    KZC14578.1    JH431566    KK852561    KDR21343.1    KQ418444    KOF87318.1    NEDP02076667    OWF36162.1    HACG01043703    CEK90568.1    HACG01043707    CEK90572.1    KOF87317.1    FN562985    CBH30974.1    LJIJ01000021    ODN05554.1    JXLN01015550    KPM10663.1    RAZU01000183    RLQ66759.1   

Proteomes

UP000007151    UP000218220    UP000053240    UP000053268    UP000235965    UP000005203    + More
UP000192223    UP000053825    UP000078542    UP000078492    UP000078540    UP000078541    UP000015104    UP000005205    UP000000311    UP000007266    UP000053105    UP000242457    UP000076502    UP000027135    UP000053454    UP000242188    UP000261360    UP000265080    UP000261400    UP000242638    UP000002852    UP000261380    UP000076420    UP000094527    UP000265100    UP000189706    UP000265200    UP000261420    UP000273346   

Pfam

PF00096   zf-C2H2        + More
PF01266   DAO
PF16901   DAO_C
PF08372   PRT_C

Interpro

IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf       
IPR030452   SP3       
IPR036188   FAD/NAD-bd_sf       
IPR031656   DAO_C       
IPR038299   DAO_C_sf       
IPR006311   TAT_signal       
IPR006076   FAD-dep_OxRdtase       
IPR011992   EF-hand-dom_pair       
IPR000447   G3P_DH_FAD-dep       
IPR002048   EF_hand_dom       
IPR013583   PRibTrfase_C       
IPR030453   SP4       

SUPFAM

SSF57667   SSF57667        + More
SSF51905   SSF51905       
SSF47473   SSF47473       

Gene 3D

1.10.8.870     3.50.50.60    

CDD

cd00051  EFh

ProteinModelPortal

A0A212F3R4   A0A2H1V9P5   A0A2A4J879   A0A1E1W9P0   A0A0N1PFI7   A0A194PMD4   + More
A0A2J7Q7L9   A0A087ZSL2   A0A1W4XN71   A0A1W4XMC4   A0A0L7QSJ1   A0A195CGJ3   A0A1Y1NC89   A0A1Y1NAG0   A0A1Y1N9U2   A0A195DYD5   A0A195AYR5   A0A195F991   T1KBE0   A0A158NPC6   E1ZX10   A0A139WKM3   A0A0M9A7R1   A0A2J7Q7M0   A0A139WKI6   A0A2A3EFE4   A0A154PTC4   T1IUW8   A0A067RE79   A0A0L8HDD4   A0A210PI52   A0A3B4XMZ3   A0A0B7BC17   A0A3P8T5U1   A0A0B7BCG1   A0A0L8HDU1   A0A3B5B3E5   A0A3P9NG07   M4A5Z8   D5GS23   A0A3B5M3M8   A0A2C9K247   A0A1D2NJY1   A0A2C9K267   A0A3P8PGJ9   A0A2C9K248   A0A3Q0D4W5   A0A2C9K249   A0A132AIC7   A0A3P9HZ21   A0A3B4UJK9   A0A3L7HLC7  

PDB

5KE7     E-value=2.2615e-21,     Score=249

KEGG

101739329    K09200 transcription factor Sp, invertebrate | (RefSeq) transcription factor Sp3-like

GO

GO:0003676   GO:0005509   GO:0052591   GO:0006072   GO:0009331   GO:0016021   GO:0006357   GO:0000981   GO:0005634   GO:0046872   GO:0004368   GO:0006289   GO:0004518   GO:0006281   GO:0048384  

PANTHER

PTHR23235:SF3   PTHR11985   PTHR23235:SF17  

Length:

224

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.06133

outside

1  -  224

 

 

Pi

60.065985

Theta

167.546016

Tajima's D

-1.490718

CLR

459.552056

CSRT

0.0652967351632418

Interpretation

Uncertain