Gene

KWMTBOMO02241  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003048

Annotation

signal_peptidase_complex_subunit_2_[Bombyx_mori]

Location

Bomo_Chr4(+):14515766-14518635      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 3.231

CDS

ATGTCTGAAACGGCGGAGGCTGCAAAGATCAACAAATGGGATGGTGCTGCAGCAAAAAATGCTGTTGATGATGCTATTAGAGAGGTAATGACTGGAGACTTAAAATGCAAGGAAAGCTTTGCTCTAATTGACGGTAGACTGTTCCTCTGTGCTCTGGCTGTTGGTGTGGCCCTTTACGCACTGCTATGGGATTATCTTTATCCATTCCCTCAATCAAGACTGGTTCTAATCATCTGTGTGTCATCATATTTCATACTGATGGGTATTTTGACCCTCTACACTACATTCAAAGAGAAGGGCATCTTTGTGGTAGCCAAGGAGAAGGTTGGAAATAACACCAGGGTCTGGGAAGCCAGTTCTTATGTAAAGAAACACGACGATAAATACAATCTCGTAATTGTTATGCGAGACACGAATGGCAACACTCGTGAGGCATCCGTGACCAAGTCGTTTGCCAACTTCATCGACGTGAACGGCACTGTAGTTCAAAACATTGTATCTAATGAGATCACCAAGCTGTACCACAGCCTCTCATCTGAGAAGAAGGAAAAGTAA

Protein

MSETAEAAKINKWDGAAAKNAVDDAIREVMTGDLKCKESFALIDGRLFLCALAVGVALYALLWDYLYPFPQSRLVLIICVSSYFILMGILTLYTTFKEKGIFVVAKEKVGNNTRVWEASSYVKKHDDKYNLVIVMRDTNGNTREASVTKSFANFIDVNGTVVQNIVSNEITKLYHSLSSEKKEK

Uniprot

Q2F5W0   H9J0L1   A0A0N1I6L5   A0A2H1V606   A0A2A4J912   A0A1E1WQ68   + More
A0A212F3T8   I4DJH2   S4PBB5   A0A1B0D490   A0A1L8DUH1   A0A1Y1K8E3   A0A1B0GI44   A0A1W4XDY3   A0A2P8XLC6   A0A0K8TSU6   T1HL74   R4G567   A0A224XL66   V5FZ74   G3CJT3   A0A067QQ52   A0A023F602   R4WSF8   A0A336MPF4   A0A1B6HWM9   A0A1B6FFI2   E2BWB2   A0A0N0BIM0   A0A1B6L2K1   A0A088AHR3   E2AIH6   A0A158NGX9   A0A195B6L5   A0A195FN76   A0A2A3EET1   V9IGX5   A0A3L8DQ93   D6WNW8   A0A0A9WHH1   N6U0A5   D1FPM8   A0A1B6BZ02   A0A182T6K8   A0A182W1Z0   A0A182Y9C2   A0A0L7RHU1   A0A182R8T8   A0A2M4C088   A0A182MBK1   A0A1S3D4N2   A0A2M4A7T8   A0A182N3X7   A0A182FUY8   B4L1K1   A0A154P7V4   A0A182Q0S9   W5JVD1   E0VF85   A0A2M3ZG98   T1EAS1   A0A0J7KDR0   U5ESF7   A0A182K6W9   A0A182P4Z8   A0A1J1IP71   B4M358   B3MAM6   A0A232EQP6   A0A0C9S1W8   A0A034WEN3   A0A0L0BTN7   B0WS21   A0A182VJV3   A0A1I8PZ10   A0A3B0JXT3   A0A182XGT7   Q7PZC7   A0A182HHF4   W8AAK6   A0A023EIM2   C6ZQT3   A0A1Q3FHF6   Q29HS9   A0A0P6GY50   A0A182UGQ4   A0A3B0KM13   A0A1W4UNV1   Q1HRP4   A0A226DNK3   A0A0P6G2H9   A0A1L8EFM3   A0A0P6H7J2   A0A1A9XXQ6   A0A1A9WZC0   A0A1L8EFR9   A0A1B0APG9   A0A162BP07   A0A0P5BJZ5   A0A0P5UDU0  

Pubmed

19121390    26354079    22118469    22651552    23622113    28004739    + More
29403074    26369729    21058630    24845553    25474469    23691247    20798317    21347285    30249741    18362917    19820115    25401762    26823975    23537049    20441151    25244985    17994087    20920257    23761445    20566863    28648823    25348373    26108605    12364791    14747013    17210077    24495485    24945155    26483478    20496585    15632085    17204158    17510324   

EMBL

DQ311313    ABD36257.1    BABH01010257    KQ461183    KPJ07565.1    ODYU01000860    + More
SOQ36261.1    NWSH01002494    PCG68168.1    GDQN01001895    JAT89159.1    AGBW02010507    OWR48373.1    AK401440    KQ459598    BAM18062.1    KPI94597.1    GAIX01005992    JAA86568.1    AJVK01011289    GFDF01004001    JAV10083.1    GEZM01092764    JAV56470.1    AJWK01011279    PYGN01001791    PSN32797.1    GDAI01000402    JAI17201.1    ACPB03006655    GAHY01000176    JAA77334.1    GFTR01003211    JAW13215.1    GALX01005476    JAB62990.1    HP639850    AEM97987.1    KK853149    KDR10695.1    GBBI01002085    JAC16627.1    AK417637    BAN20852.1    UFQS01001975    UFQT01001975    SSX12830.1    SSX32272.1    GECU01028671    JAS79035.1    GECZ01025773    GECZ01020812    JAS43996.1    JAS48957.1    GL451103    EFN80016.1    KQ435727    KOX77868.1    GEBQ01022024    JAT17953.1    GL439791    EFN66766.1    ADTU01015319    KQ976574    KYM80158.1    KQ981387    KYN42030.1    KZ288282    PBC29521.1    JR047077    AEY60320.1    QOIP01000005    RLU22541.1    KQ971343    EFA03199.1    GBHO01037646    GBHO01037644    GBHO01037643    GBHO01037640    GBRD01015528    GDHC01010946    GDHC01005394    JAG05958.1    JAG05960.1    JAG05961.1    JAG05964.1    JAG50298.1    JAQ07683.1    JAQ13235.1    APGK01054307    KB741248    KB631667    ENN71972.1    ERL85151.1    EZ419778    ACY69951.1    GEDC01031014    JAS06284.1    KQ414584    KOC70557.1    GGFJ01009598    MBW58739.1    AXCM01007101    GGFK01003535    MBW36856.1    CH933810    EDW07637.1    KQ434826    KZC07414.1    AXCN02001095    ADMH02000001    ETN68146.1    DS235107    EEB12041.1    GGFM01006788    MBW27539.1    GAMD01000793    JAB00798.1    LBMM01009164    KMQ88336.1    GANO01002377    JAB57494.1    CVRI01000054    CRL00289.1    CH940651    EDW65233.1    CH902618    EDV41313.1    NNAY01002733    OXU20668.1    GBYB01014811    JAG84578.1    GAKP01006196    GAKP01006195    JAC52757.1    JRES01001480    KNC22594.1    DS232063    EDS33639.1    OUUW01000011    SPP86875.1    AAAB01008986    EAA00503.4    APCN01002408    GAMC01021665    JAB84890.1    JXUM01051027    GAPW01004662    GAPW01004661    GAPW01004660    GAPW01004659    KQ561672    JAC08937.1    KXJ77845.1    EZ114884    ACU30937.1    GFDL01008071    JAV26974.1    CH379064    EAL31678.2    GDIQ01039441    JAN55296.1    SPP86876.1    DQ440050    CH477271    ABF18083.1    EAT45290.1    LNIX01000015    OXA46424.1    GDIQ01039440    JAN55297.1    GFDG01001384    JAV17415.1    GDIQ01023138    JAN71599.1    GFDG01001386    JAV17413.1    JXJN01001399    LRGB01027721    KZR95670.1    GDIP01183503    JAJ39899.1    GDIP01237002    GDIP01118209    JAL85505.1   

Proteomes

UP000005204    UP000053240    UP000218220    UP000007151    UP000053268    UP000092462    + More
UP000092461    UP000192223    UP000245037    UP000015103    UP000027135    UP000008237    UP000053105    UP000005203    UP000000311    UP000005205    UP000078540    UP000078541    UP000242457    UP000279307    UP000007266    UP000019118    UP000030742    UP000075901    UP000075920    UP000076408    UP000053825    UP000075900    UP000075883    UP000079169    UP000075884    UP000069272    UP000009192    UP000076502    UP000075886    UP000000673    UP000009046    UP000036403    UP000075881    UP000075885    UP000183832    UP000008792    UP000007801    UP000215335    UP000037069    UP000002320    UP000075903    UP000095300    UP000268350    UP000076407    UP000007062    UP000075840    UP000069940    UP000249989    UP000001819    UP000075902    UP000192221    UP000008820    UP000198287    UP000092443    UP000091820    UP000092460    UP000076858   

PRIDE

Q2F5W0    H9J0L1   

Pfam

PF06703   SPC25

Interpro

IPR009582   SigPept_cplx_su2        + More
IPR038751   Int8       

ProteinModelPortal

Q2F5W0   H9J0L1   A0A0N1I6L5   A0A2H1V606   A0A2A4J912   A0A1E1WQ68   + More
A0A212F3T8   I4DJH2   S4PBB5   A0A1B0D490   A0A1L8DUH1   A0A1Y1K8E3   A0A1B0GI44   A0A1W4XDY3   A0A2P8XLC6   A0A0K8TSU6   T1HL74   R4G567   A0A224XL66   V5FZ74   G3CJT3   A0A067QQ52   A0A023F602   R4WSF8   A0A336MPF4   A0A1B6HWM9   A0A1B6FFI2   E2BWB2   A0A0N0BIM0   A0A1B6L2K1   A0A088AHR3   E2AIH6   A0A158NGX9   A0A195B6L5   A0A195FN76   A0A2A3EET1   V9IGX5   A0A3L8DQ93   D6WNW8   A0A0A9WHH1   N6U0A5   D1FPM8   A0A1B6BZ02   A0A182T6K8   A0A182W1Z0   A0A182Y9C2   A0A0L7RHU1   A0A182R8T8   A0A2M4C088   A0A182MBK1   A0A1S3D4N2   A0A2M4A7T8   A0A182N3X7   A0A182FUY8   B4L1K1   A0A154P7V4   A0A182Q0S9   W5JVD1   E0VF85   A0A2M3ZG98   T1EAS1   A0A0J7KDR0   U5ESF7   A0A182K6W9   A0A182P4Z8   A0A1J1IP71   B4M358   B3MAM6   A0A232EQP6   A0A0C9S1W8   A0A034WEN3   A0A0L0BTN7   B0WS21   A0A182VJV3   A0A1I8PZ10   A0A3B0JXT3   A0A182XGT7   Q7PZC7   A0A182HHF4   W8AAK6   A0A023EIM2   C6ZQT3   A0A1Q3FHF6   Q29HS9   A0A0P6GY50   A0A182UGQ4   A0A3B0KM13   A0A1W4UNV1   Q1HRP4   A0A226DNK3   A0A0P6G2H9   A0A1L8EFM3   A0A0P6H7J2   A0A1A9XXQ6   A0A1A9WZC0   A0A1L8EFR9   A0A1B0APG9   A0A162BP07   A0A0P5BJZ5   A0A0P5UDU0  

KEGG

692906    K12947 signal peptidase complex subunit 2 [EC:3.4.-.-] | (RefSeq) signal peptidase complex subunit 2

PATHWAY

03060    Protein export - Bombyx mori (domestic silkworm)

GO

GO:0005787   GO:0016021   GO:0008233   GO:0006465   GO:0045047   GO:0034472   GO:0004519   GO:0005634   GO:0006289   GO:0004518   GO:0006281   GO:0048384  

PANTHER

PTHR13085   PTHR13350  

Length:

184

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

44.40982

Exp number, first 60 AAs:

16.387

Total prob of N-in:

0.80408

POSSIBLE N-term signal

sequence

inside

1  -  46

TMhelix

47  -  69

outside

70  -  73

TMhelix

74  -  96

inside

97  -  184

 

 

Pi

202.717474

Theta

173.026833

Tajima's D

0.702652

CLR

0

CSRT

0.574571271436428

Interpretation

Uncertain