SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02231  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA003112
Annotation
PREDICTED:_transmembrane_9_superfamily_member_2_[Bombyx_mori]
Full name
Transmembrane 9 superfamily member      
Location in the cell
PlasmaMembrane   Reliability : 4.979
 

Sequence

CDS
ATGTCACTCCAGGCGTTTGTGATTTTTTCATTTCTGTTTTTAACACCTATTAAGGGTTTTTATTTACCTGGTTTAGCCCCCGTGAACTATTGCAAAACAACCGAAGATCCTGGAAAATCATGCAAGACAGAGATTCCTTTATATGTGAATAGGCTGAATACAGAAGAATCTATTATTCCATTTGAATACCACCACTTTGATTTCTGTACTACAAATGAGGACCAATCGCCTGTTGAAAATCTCGGTCAAGTAGTTTTTGGTGAGAGAATCCGTCCTAGTCCTTATAAACTAAAGTTTCTTGAGGATACAAAATGTAAAGCAGTATGCAAGAAGACATACAGAGGCTCCGATACAGATTCTACAAAAAAACTTAACTTGCTGAAGATGGGTATGACATTGTGCTACCAACATCACTGGATTTTGGATAATATGCCAGTGACCTGGTGTTACCTAGTCAATGAAGGTGGTAAAATGTACTGCAGTACTGGTTTTCCAATGGGTTGCCAAGTTCGTAAAGATAATATGGACACGTGTGCTTCGATAGTTACTATACCTGCAAAGGTTGGTGCCTATTACCTTGTTAACCATGTGGATCTGGAGATTACATACCACAGTGGTGGTGATGAAGATTGGGCTGTAAGCTTTGGTGAAAATGGAGGCCGCATTATATCTGCTAAGGTAAAGCCAGCCAGCATAAGACATGAAAACGAAAACAACTTAGACTGTACTGTTCGGAACAATCCTCAAGAAATACCAGCAACACTTGACAGTGATAAGACTTTGGACGTAATTTATACGTACAGTGTTACATTTATAAAGAACAACAACATTAAATGGTCATCGAGATGGGACTACATATTAGAATCAATGCCGCAGACCAATATCCAATGGTTCTCGATTTTAAACTCCTTGGTGATAGTCCTGTTCCTCAGCGGAATGGTTGCTATGATATTGCTAAGGACCCTCTATAAAGACATCGCTAGATACAACCAAATGGAATGTGGTGAAGATGCTCAGGAGGAATTCGGTTGGAAATTAGTTCACGGTGACGTCTTTCGACCTCCTCGTCGGGGCATGCTGCTGGCTGTCTTCTTAGGATCTGGATCTCAAGTGTTCGGCATGACACTTGTGACGCTGGCGTTCGCGTGCCTCGGGTTCCTGTCGCCGGCCAACCGCGGCGCGCTGATGACGTGCGCGCTCGTGGTGTGGGTGCTGCTGGGCGCCGCCGCCGGCTACGTCAGCGCGCGCGTCTACAAGAGCTTCGGCGGACGAAGATGGAAGAGCAATATCCTACTCACTTCCACTGTCTGTCCCGGCGTTGTTTTCTCTCTGTTCTTCGTGATGAACTTGGTGCTGTGGGGTAAGGACTCGTCGGCCGCGGTGCCGTTCTCGACGCTGGTGGCGCTGCTCGCCCTGTGGTTTGGAGTGTCTGTGCCGCTGACGTTCATCGGGGCCTACTTCGGCTTCAGAAAGAGGATCCTGGACCATCCAGTGCGCACCAACCAGATCCCGCGGCAGATCCCCGAGCAGTCCCTGTACACGCAGCCGATACCCGGCATCATCATGGGAGGAGTTTTGCCCTTCGGTTGCATCTTTATACAGCTGTTCTTCATACTCAACTCCCTGTGGTCTAGCCAGATGTACTATATGTTCGGCTTCCTGTTCCTGGTCTTCGTGATCCTGGTGATCACGTGTTCGGAGACGACGATCCTGCTGTGCTACTTCCACCTGTGCGCCGAGGACTACCACTGGTGGTGGCGCGCCTTCTTCAGCTCTGGCTCCACGGCCGGTTACCTGTTCATCTACTGCTGTCACTACTTCGTCACCAAGTTGAACATCGAGGACGCTGCCTCCACCTTCCTCTACTTCGGTTACACTCTGATCATGGTGTTCTTATTCTTCCTTCTGACCGGCACGATCGGCTTCATGGCCTGTTTCTGGTTCGTCAGGAAGATCTACAGCGTAGTGAAAGTAGATTAA
Protein
MSLQAFVIFSFLFLTPIKGFYLPGLAPVNYCKTTEDPGKSCKTEIPLYVNRLNTEESIIPFEYHHFDFCTTNEDQSPVENLGQVVFGERIRPSPYKLKFLEDTKCKAVCKKTYRGSDTDSTKKLNLLKMGMTLCYQHHWILDNMPVTWCYLVNEGGKMYCSTGFPMGCQVRKDNMDTCASIVTIPAKVGAYYLVNHVDLEITYHSGGDEDWAVSFGENGGRIISAKVKPASIRHENENNLDCTVRNNPQEIPATLDSDKTLDVIYTYSVTFIKNNNIKWSSRWDYILESMPQTNIQWFSILNSLVIVLFLSGMVAMILLRTLYKDIARYNQMECGEDAQEEFGWKLVHGDVFRPPRRGMLLAVFLGSGSQVFGMTLVTLAFACLGFLSPANRGALMTCALVVWVLLGAAAGYVSARVYKSFGGRRWKSNILLTSTVCPGVVFSLFFVMNLVLWGKDSSAAVPFSTLVALLALWFGVSVPLTFIGAYFGFRKRILDHPVRTNQIPRQIPEQSLYTQPIPGIIMGGVLPFGCIFIQLFFILNSLWSSQMYYMFGFLFLVFVILVITCSETTILLCYFHLCAEDYHWWWRAFFSSGSTAGYLFIYCCHYFVTKLNIEDAASTFLYFGYTLIMVFLFFLLTGTIGFMACFWFVRKIYSVVKVD

Summary

Similarity
Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
Feature
chain  Transmembrane 9 superfamily member
EMBL
NWSH01000324    PCG77479.1    KQ459598    KPI94604.1    ATLV01021497    KE525319    + More
KFB46588.1    AXCN02000659    GGFJ01002900    MBW52041.1    AXCM01000135    APCN01001702    AAAB01008980    EAA13839.4    GGFM01000375    MBW21126.1    GGFK01001125    MBW34446.1    ADMH02001134    ETN63980.1    JTDY01004651    KOB67907.1    GANO01002016    JAB57855.1    CP012523    ALC40318.1    JRES01000714    KNC29010.1    GFDL01009928    JAV25117.1    GFDL01009254    JAV25791.1    CH480833    EDW46373.1    CM000361    CM002910    EDX05652.1    KMY91197.1    JXJN01012599    GFDL01009227    JAV25818.1    GFDG01002358    JAV16441.1    DS231881    EDS42687.1    GFDL01009238    JAV25807.1    GFDL01009041    JAV26004.1    GFDL01009869    JAV25176.1    GFDG01002348    JAV16451.1    AE014134    AY069665    AAF53917.1    AAL39810.1    GFDL01009040    JAV26005.1    GFDG01002357    JAV16442.1    GFDG01002332    JAV16467.1    CH478001    EJY58030.1    JXUM01023592    JXUM01023593    GAPW01000432    KQ560665    JAC13166.1    KXJ81377.1    CH902620    EDV31436.1    CM000158    EDW90960.1    GFDF01003925    JAV10159.1    GFDF01003922    JAV10162.1    GFDF01003924    JAV10160.1    GFDF01003923    JAV10161.1    GALA01001759    JAA93093.1    CH933807    EDW13515.2    KRG03796.1    CH954179    EDV54521.1    GECZ01022422    GECZ01011896    GECZ01002596    JAS47347.1    JAS57873.1    JAS67173.1    NEVH01016296    PNF25991.1    CH940649    EDW64350.2    PNF25990.1    CH963857    EDW75989.1    CH916368    EDW02782.1    OUUW01000004    SPP79621.1    JR049291    AEY60921.1    CH379060    EAL33928.2    KQ434775    KZC04064.1    KQ414645    KOC66627.1    KZ288311    PBC28488.1    AJVK01010496    AJVK01010497    KA646975    AFP61604.1    KK853129    KDR10991.1    GFDG01003159    JAV15640.1    KQ982254    KYQ58583.1    GL888644    EGI58672.1    GFTR01007665    JAW08761.1    KQ976465    KYM84359.1    ADTU01018377    KQ981820    KYN35355.1    GDHC01003430    JAQ15199.1    GBRD01005922    JAG59899.1    GBHO01010060    JAG33544.1    KQ980304    KYN16736.1    DS235812    EEB17433.1    KK107681    EZA48093.1    KQ977634    KYN01163.1    QOIP01000006    RLU22097.1    GAMC01001470    JAC05086.1    GL447151    EFN86848.1    GEZM01055102    JAV73144.1    PNF25989.1    AK417408    BAN20623.1    GALX01004804    JAB63662.1    KQ971343    EFA03539.1   
Pfam
PF02990   EMP70        + More
PF00450   Peptidase_S10
Interpro
IPR004240   EMP70        + More
IPR001563   Peptidase_S10       
IPR018202   Ser_caboxypep_ser_AS       
IPR033124   Ser_caboxypep_his_AS       
IPR029058   AB_hydrolase       
IPR036259   MFS_trans_sf       
SUPFAM
SSF53474   SSF53474        + More
SSF103473   SSF103473       
Gene 3D

Ontologies

Topology

SignalP
Position:   1 - 19,         Likelihood:  0.977502
 
 
Length:
659
Number of predicted TMHs:
9
Exp number of AAs in TMHs:
216.40607
Exp number, first 60 AAs:
10.10853
Total prob of N-in:
0.42585
POSSIBLE N-term signal
sequence
outside
1  -  296
TMhelix
297  -  319
inside
320  -  359
TMhelix
360  -  382
outside
383  -  391
TMhelix
392  -  414
inside
415  -  429
TMhelix
430  -  452
outside
453  -  466
TMhelix
467  -  489
inside
490  -  515
TMhelix
516  -  538
outside
539  -  552
TMhelix
553  -  575
inside
576  -  586
TMhelix
587  -  609
outside
610  -  626
TMhelix
627  -  649
inside
650  -  659
 
 

Population Genetic Test Statistics

Pi
176.199301
Theta
159.383911
Tajima's D
0.051777
CLR
1.486992
CSRT
0.381730913454327
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 HENENNIDCTVR 100.00 1e-07
26822097 MDAISTGTISGAQK 100.00 4e-05
26822097 YNQMECGEDAQEEFGWK 100.00 6e-04
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