SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02226  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA003044
Annotation
PREDICTED:_myosin-VIIa_[Bombyx_mori]
Full name
Myosin-VIIa      
Alternative Name
Protein crinkled
Location in the cell
Nuclear   Reliability : 2.178
 

Sequence

CDS
ATGGTGATCGTGACCAGGGGCGATTACATATGGATCGAGCCGGTGTCGGGGCGGGAGTTCGACGTGGCGATCGGAGCACGTGTTCTCGCGGCCGAGGGACGTCGGATCCGGGTCCGGGACGACGACGGCAACGAGCAATGGCTTCCACCGGAGCGCCGCATCAAGGCGATGCACGCGACCTCCGTGCACGGAGTCGAGGATATGATCTCACTCGGCGATCTGCACGAGGCCGGTATACTAAGGAATCTCCTCATCCGGTACAATGAAAATCTTATTTATACATACACCGGATCGATATTAGTTGCGGTGAATCCGTATCAGATACTACCGATCTACACGGCGGACCAGATCAAACTGTACAAGGAGAGAAAAATCGGCGAGCTACCACCCCATATATTCGCGATTGGTGACAACGCGTACGCACACATGCGGAGATATAATCAGGATCAATGCATCGTTATCAGCGGGGAATCGGGTGCTGGAAAGACGGAGTCAACAAAGCTTATACTTCAATACCTTGCTGCGATTAGCGGTAAACATTCATGGATAGAACAACAGATTTTAGAAGCTAATCCAATTCTAGAAGCTTTTGGGAATGCGAAGACAGTTCGAAATGATAATTCTTCGCGATTCGGAAAATATATAGATATACATTTCAATAGCTCTGGAGTTATAGAGGGAGCTAAAATTGAACAATATCTGTTGGAGAAATCTAGGATTGTATCCCAAGGCACCGAGGAGAGGAACTATCACGTGTTTTATTGTTTACTGGCTGGATTATCCAAAGACGATAAAAAGAAATTGGAATTAGGCGACCCTTCGGAATACAGATATCTGTCTGCGGGCGGGAGTTTTTCGTGCGAGGGCAGAGATGACGCTGCAGAATTCGCAGACATTAGATCAGCAATGAAAGTGTTATTATTCACAGAATCAGAAATATGGGAAATTTTAAAATTACTGGCAGCAGTCTTACATTGTGGAAACATAAAGTACGAAGCGACTGTTGTTGATAACCTTGACGCCACTGAAATTACAGAAGAAGCGAATGTAAGAAAGGTAGCCAACTTACTTGGTGTGCCCTTACAATCTCTTATACGTGCTTTGACTAGAAAAACACTATTTGCCCACGGAGAAACTGTTATATCAACACTAAGCAGAGATCAGTCTGTTGACATTAGAGATGCATTTGTGAAAGGAATTTACGGTAGGCTATTCGTAACTATTGTCAGGAAAATCAACGCGGCCATTTACAAACCCAAGTCAACTACAAGAACTGCAATTGGTGTCCTTGACATATTTGGTTTTGAAAACTTTGATCACAACAGTTTTGAACAGTTCTGCATTAACTTCGCAAACGAGAATCTACAACAGTTTTTCGTCAGGCACATTTTCAAATTGGAACAGGAAGAATATAACCATGAAGGCATAAATTGGCAACACATCGAGTTTGTTGACAATCAGGATGCTTTGGACTTGATTGCTTTGAAACAGCTAAACATTATGGCTTTGATAGACGAAGAATCTAAGTTTCCAAAAGGGACTGACCAAACTATGCTAGCTAAACTTCATAAGACGCACGGTCTCCACAGAAATTACCTTAAGCCAAAGTCTGACATTAATACTAGTTTCGGATTAAACCATTTCGCTGGAATAGTTTTTTACGACACACGGGGATTCTTAGAGAAAAACCGAGACACATTTAGTGCTGACTTACTGCAATTAATTCACATATCGACGAATAAATTCTTACAGCAGATATTCCAAGAGGATATCGTCATGGGCTCTGAAACAAGGAAACGGACACCGACGTTGTCAACGCAGTTCAAAAAATCATTAGACTTGTTGATGAGAACGTTAGGGACTTGTCAGCCGTTCTTCATTCGCTGTATCAAACCGAATGAATTTAAAAAACCAATGCTCTTCGATCGCGGCCTTTGTTGCAGACAGCTTAGATACTCCGGAATGATGGAAACTATTCGAATCCGGAGAGCCGGCTATCCGATAAGACATAGTTTTAAGGAATTTGTCGAAAGATATAGATTTTTAATATCGGGGGTACCCCCTGCTCACAAGACGGACTGTCGATCAGCCACTGCAAAAATTTGTGCTCAAGTATTAGGGAAATCCGATTATCAGTTGGGTCATACCAAAGTGTTCCTTAAAGACGCTCACGATTTGTTCTTGGAGCAAGAAAGAGACCGAGTTTTAACGAGAAAGATATTAATACTCCAAAGATCGATACGAGGATGGGTTTATCGTAGAAGATTCTTGAAGATGAGAGCGGCAGCTGTTCTCATTCAGCGTCATTGGCGGGGTAAACTACAGAGGATAAGGTACCAGAAGATGAAGGTCGGGTACGCTAGACTCCAGGCATTGATACGAGCAAGAGTCCTCGCACACAGATTCAGACATTTGCGCGGCCATATTGTCTCTCTACAGGCTGCGGCTCGCGGGTACCTGGTGCGGAGGTCGTACGGCCACAAGATGTGGGCGATCGTGAAGATCCAGAGCCACGTGCGGCGGCTGATCGCGGTGCGGCGCTACCGGCGGCTCGCGGCCGAGGAGCGCGCGCACCGCGAGGCGCTGCGGCTGCGGCGCCAGGAGGAGCAGCGCCTGCACCACCAGGGGAACACGCGCGCCAAGGAGATCGCCGAACAAAACTACAGGGAGCGTATGTACGAATTAGAAAGGCGTGAAGCTGAATTAGCTCTGGAAGAGAAGCGACAATTGGAAGCCAAGAGGACGTTGCTGCAGGAAGCGGCCCGGAAGCAAGACGAACCTGTCGACGACAGTAAACTCGTGGAGGCCATGTTTGATTTCCTGCCCGACTCTAGCAGTGAAGCCCCAGCGCCTAAGGACACATCCATTTTCAGTGACTTGCCGCAAATGAGAGCTGATCAACAAGAAATGGTGACACCAATGCAGACCACTTCCGAAGATGAAGAGGACCTTTCAGAGTTCAAGTTCCAGAAGTTTGCCGCAACTTACTTCCAAGGAAATGTCACACATCAGTACTCTAGGAAAACACTGAAACATCCATTACTGCCTTTATTAACGCAGGGAGATCAATTGGCAGCGCAAGCGTTATGGGTCACGATTCTGCGTTTCACTGGAGACCTGGCGGAGCCTAGATATCACACAATGGATCGCGACAATACGTCGGTCATGTCCAAAGTCACGGCTACGTTGGGCAGGAACTTCATCAGGTCCAAGGAGTTTCAAGAGGCGCAGATGATGGGCGTCGACCCGGATGCTTACCTAAATAAGCAAAAACCAAGGTCGATCAGACACAAACTGGTGTCTCTAACGTTGAAGAGGAAGAATAAGCTGGGTGAAGACGTCAGAAGGAAGCTACAGGATGAGGAATATACTGCAGACAGCTATCAGTCGTGGCTGGAATCGCGTCCAACTTCGAACTTAGAAAAACTTCATTTCATAATCGGTCACGGCATTCTTCGCGCAGAGCTAAGAGACGAAATATATTGTCAAATCTGCAAACAGCTGACTAACAATCCATCGAAATCCTCTCACGCCCGAGGATGGATCCTCCTATCGTTGTGTGTTGGGTGTTTTGCACCAAGTGAGAAGTTTGTCAATTATCTCAGAGCCTTTATCAGGGAAGGCCCTCCCGGCTACGCGCCGTACTGTGAGGATCGATTGAAAAGAACATTTAATAACGGCACGAGAAACCAGCCCCCCTCGTGGTTAGAACTTCAGGCCACTAAATCTAAAAAACCCATAATGTTGCCAATAACCTTTATGGATGGCAATACAAAAACTTTATTAGCCGATTCTGCGACAACAGCCAGAGAGCTTTGTAACCAACTCTCGGACAAAATCGGCCTGAGAGATCAGTTCGGTTTTTCGCTGTACATAGCCTTGTTCGACAAGGTGAGCTCGCTCGGCAGCGGGGGCGACCACGTAATGGATGCGATATCACAGTGCGAGCAATACGCAAAAGAACAAGGCGCACAAGAAAGAAATGCGCCGTGGAGATTATTCTTTAGAAAGGAAATTTTCGCTCCCTGGCACGACCCTACCGAGGATCAAGTAGCGACGAATTTGATTTATCAGCAAGTCGTGCGAGGGGTTAAATTCGGCGAATACAGATGCGATAAAGAAGAAGACCTGGCCATGATAGCTGCCCAACAGTATTACATTGAATACGGGCAAGACATGAACGCGGAACGACTCTACACGCTGTTACCCAACTACATACCGGATTATTGTTTGACAGGAGTAGAGAAAGCCGTTGATAGATGGGGCGCACTCGTCGTGCAGGCATACAAAAAGAGTTATTACGTCAAAGAGAAAGTTCCCGCTTACAAAGTCAAAGAAGATGTTGTGAGTTACGCAAAATTCAAATGGCCCCTGTTGTTCTCTAGGTTCTACGAAGCCTACAGAAATTCCGGGCCGAATTTACCTAAAAACGATGTCATAATAGCTGTTAATTGGACCGGTGTTTATGTTGTGGACGATCAAGAACAAGTCTTGTTAGAATTGTCGTTCCCGGAGATCACAACTGTCGCAAGTCAGAAGACAAATAAAGTGTTCACTCAAACGTTCAGTTTAAATACCGTAAGAGGTGAAGAATTCACATTCCAAAGTCCGAATGCAGAGGACATACGAGATTTAGTAGTTTACTTCTTAGAGGGACTAAAGAAAAGATCAAAGTTCGTGATTGCTTTACAAGATTACAAAGCTCCAGGCGAGGGGTCCAGTTTCTTGACATTCCAAAAAGGGGATCTAATAGTGTTGGAAGAAGAAAGTACAGGTGAATCGGTCTTAAATAATGGATGGTGTATTGGTCGTTGCGAAAGGACTATGGAAAGAGGAGACTTCCCTGCGGAAACAGTATACGTGCTACCCGCTTTAACGAAGCCACCGCCAGATATACTAGCTTTGTTCTGTCAAGAAGGCGCACAACACGGTCGAAGACCCCCTACGAGTACCTTCAATGGAACTGAATCGAAAGACAAACCTCATACGCTGTTAGAATACGCTCTTGACCATTTTAGATTACCACCAAAACGCACAGCTTCCAAGGGCCTAACATTATCAACAGCCAAACGAGGGGGCTCTGAAGAACTGTGGAGGCACTCCAGAGAACCAATAAAACAACCTTTGCTCAAAAAGTTGCAAGCAAAGGAAGAGCTGGCAGAAGAGGCCTGTTTCGCGTTTACGGCCATACTAAAGTACATGAGTGACCTACCTTCCAAGCGCCCCCGTATCGGCAACGAATACACCGATCATATTTTCGATGGACCTCTGAAACATGAAATATTACGCGACGAAATTTACTGCCAAATAATGAAACAGCTCACTGATAATAGAAATAGAATGTCTGAAGAACGGGGCTGGGAATTAATGTGGTTGGCTACGGGGCTATTCGCTTGTAGTCAGGGGCTGCTTAGAGAATTAACTTTATTTCTGAGAACCAGAAGGTACCCTATTGCTCAAGACTCACTTCAAAGACTGCAAAAGACGCTCCGAAACGGACAGAGGAAGTATCCGCCGCACCAAGTGGAGGTGGAAGCTATACAACACAAGACAACTCAGATATTTCACAAGGTGTACTTCCCCGACGACACCGATGAAGCTTTCGAAGTGGACTCGTCAACTCGAGCGAAAGATTTCTGCCAAAACATCGCTCAAAGACTGAATCTCAGATCTAGTGAAGGCTTTAGTTTGTTCGTTAAGATAGCTGATAAGGTGATATCGGTGCCGGAGGGAGATTTCTTTTTCGACTTCGTGCGGCATCTGACTGATTGGATTAAGAAGGCGCGTCCTACACGCGACGGAATCATACCACAGTTTACGTATCAAGTAAGTTTGTAA
Protein
MVIVTRGDYIWIEPVSGREFDVAIGARVLAAEGRRIRVRDDDGNEQWLPPERRIKAMHATSVHGVEDMISLGDLHEAGILRNLLIRYNENLIYTYTGSILVAVNPYQILPIYTADQIKLYKERKIGELPPHIFAIGDNAYAHMRRYNQDQCIVISGESGAGKTESTKLILQYLAAISGKHSWIEQQILEANPILEAFGNAKTVRNDNSSRFGKYIDIHFNSSGVIEGAKIEQYLLEKSRIVSQGTEERNYHVFYCLLAGLSKDDKKKLELGDPSEYRYLSAGGSFSCEGRDDAAEFADIRSAMKVLLFTESEIWEILKLLAAVLHCGNIKYEATVVDNLDATEITEEANVRKVANLLGVPLQSLIRALTRKTLFAHGETVISTLSRDQSVDIRDAFVKGIYGRLFVTIVRKINAAIYKPKSTTRTAIGVLDIFGFENFDHNSFEQFCINFANENLQQFFVRHIFKLEQEEYNHEGINWQHIEFVDNQDALDLIALKQLNIMALIDEESKFPKGTDQTMLAKLHKTHGLHRNYLKPKSDINTSFGLNHFAGIVFYDTRGFLEKNRDTFSADLLQLIHISTNKFLQQIFQEDIVMGSETRKRTPTLSTQFKKSLDLLMRTLGTCQPFFIRCIKPNEFKKPMLFDRGLCCRQLRYSGMMETIRIRRAGYPIRHSFKEFVERYRFLISGVPPAHKTDCRSATAKICAQVLGKSDYQLGHTKVFLKDAHDLFLEQERDRVLTRKILILQRSIRGWVYRRRFLKMRAAAVLIQRHWRGKLQRIRYQKMKVGYARLQALIRARVLAHRFRHLRGHIVSLQAAARGYLVRRSYGHKMWAIVKIQSHVRRLIAVRRYRRLAAEERAHREALRLRRQEEQRLHHQGNTRAKEIAEQNYRERMYELERREAELALEEKRQLEAKRTLLQEAARKQDEPVDDSKLVEAMFDFLPDSSSEAPAPKDTSIFSDLPQMRADQQEMVTPMQTTSEDEEDLSEFKFQKFAATYFQGNVTHQYSRKTLKHPLLPLLTQGDQLAAQALWVTILRFTGDLAEPRYHTMDRDNTSVMSKVTATLGRNFIRSKEFQEAQMMGVDPDAYLNKQKPRSIRHKLVSLTLKRKNKLGEDVRRKLQDEEYTADSYQSWLESRPTSNLEKLHFIIGHGILRAELRDEIYCQICKQLTNNPSKSSHARGWILLSLCVGCFAPSEKFVNYLRAFIREGPPGYAPYCEDRLKRTFNNGTRNQPPSWLELQATKSKKPIMLPITFMDGNTKTLLADSATTARELCNQLSDKIGLRDQFGFSLYIALFDKVSSLGSGGDHVMDAISQCEQYAKEQGAQERNAPWRLFFRKEIFAPWHDPTEDQVATNLIYQQVVRGVKFGEYRCDKEEDLAMIAAQQYYIEYGQDMNAERLYTLLPNYIPDYCLTGVEKAVDRWGALVVQAYKKSYYVKEKVPAYKVKEDVVSYAKFKWPLLFSRFYEAYRNSGPNLPKNDVIIAVNWTGVYVVDDQEQVLLELSFPEITTVASQKTNKVFTQTFSLNTVRGEEFTFQSPNAEDIRDLVVYFLEGLKKRSKFVIALQDYKAPGEGSSFLTFQKGDLIVLEEESTGESVLNNGWCIGRCERTMERGDFPAETVYVLPALTKPPPDILALFCQEGAQHGRRPPTSTFNGTESKDKPHTLLEYALDHFRLPPKRTASKGLTLSTAKRGGSEELWRHSREPIKQPLLKKLQAKEELAEEACFAFTAILKYMSDLPSKRPRIGNEYTDHIFDGPLKHEILRDEIYCQIMKQLTDNRNRMSEERGWELMWLATGLFACSQGLLRELTLFLRTRRYPIAQDSLQRLQKTLRNGQRKYPPHQVEVEAIQHKTTQIFHKVYFPDDTDEAFEVDSSTRAKDFCQNIAQRLNLRSSEGFSLFVKIADKVISVPEGDFFFDFVRHLTDWIKKARPTRDGIIPQFTYQVSL

Summary

Description
Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements: can function in cells as a single-molecule cargo transporter. A very slow and high-duty-ratio motor, may be suitable for tension maintenance of actin filaments. Their highly divergent tails are presumed to bind to membranous compartments, which would be moved relative to actin filaments. Plays a key role in the formation of cellular projections and other actin-based functions required for embryonic and larval viability. Necessary for auditory transduction: plays a role in Johnston organ (JO) organization by functioning in scolopidial apical attachment and therefore to acoustic stimulus propagation from the antenna a2/a3 joint to transducing elements (By similarity).
Myosins are actin-based motor molecules with ATPase activity (PubMed:16585515). Unconventional myosins serve in intracellular movements: can function in cells as a single-molecule cargo transporter (PubMed:16585515). A very slow and high-duty-ratio motor, may be suitable for tension maintenance of actin filaments (PubMed:16585515). Their highly divergent tails are presumed to bind to membranous compartments, which would be moved relative to actin filaments (PubMed:15579689). Plays a key role in the formation of cellular projections and other actin-based functions required for embryonic and larval viability (PubMed:15579689, PubMed:16585515). Necessary for auditory transduction: plays a role in Johnston's organ organization by functioning in scolopidial apical attachment and therefore to acoustic stimulus propagation from the antenna a2/a3 joint to transducing elements (PubMed:15886106, PubMed:27331610). Interaction with the myosin zip may be important for its function in scolopidial apical attachment (PubMed:27331610). During oogenesis it has Cad99c-dependent and Cad99c-independent roles in regulating the shape and spacing of the follicle cell microvilli which secrete eggshell material such as the vitelline membrane (PubMed:25236597). May be required for the normal expression of Cad99c in the follicle cell microvilli (PubMed:25236597).
Subunit
Homodimerizes in a two headed molecule through the formation of a coiled-coil rod.
Homodimerizes in a two headed molecule through the formation of a coiled-coil rod (PubMed:16585515). Homodimers motility is approximately 8-10 times slower than that of myosin V, and its step size is 30 nm, which is consistent with the presence of five IQ motifs in its neck region (PubMed:16585515). Interacts with Cad99C (via the cytoplasmic domain) (PubMed:25236597, PubMed:27331610). Interacts with zip and Sans (PubMed:27331610).
Similarity
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
Keywords
Actin-binding   ATP-binding   Coiled coil   Complete proteome   Cytoplasm   Motor protein   Myosin   Nucleotide-binding   Reference proteome   Repeat   SH3 domain   Cell projection   Phosphoprotein  
Feature
chain  Myosin-VIIa
EMBL
NWSH01000324    PCG77465.1    KQ459598    KPI94607.1    KQ461183    KPJ07555.1    + More
BABH01010284    BABH01010285    BABH01010286    AGBW02010107    OWR49160.1    KQ971343    EFA03361.1    KQ761039    OAD58359.1    KK107111    QOIP01000011    EZA58907.1    RLU16549.1    NEVH01016296    PNF26019.1    FX985580    BBF97914.1    KK853129    KDR10964.1    PNF26021.1    ADTU01025086    ADTU01025087    ADTU01025088    ADTU01025089    KQ981948    KYN32622.1    KQ976723    KYM76657.1    GL887898    EGI69596.1    KQ978023    KYM97974.1    KQ980322    KYN16600.1    GBYB01009046    JAG78813.1    GEZM01051100    JAV75175.1    CH477210    EAT47711.1    GGFM01000990    MBW21741.1    GGFJ01000094    MBW49235.1    DS231876    EDS41979.1    GEDC01025701    GEDC01023358    JAS11597.1    JAS13940.1    AXCM01005165    GL440425    EFN65899.1    GGFK01001239    MBW34560.1    AXCN02000794    APCN01003381    GGFL01002232    MBW66410.1    GECZ01028367    JAS41402.1    ADMH02000481    ETN66322.1    DS235811    EEB17358.1    GL764272    EFZ18040.1    KQ982275    KYQ58443.1    GGFL01002304    MBW66482.1    NNAY01003312    OXU19644.1    KQ434809    KZC06404.1    KB632357    ERL93472.1    ATLV01014402    KE524970    KFB38675.1    KZ288322    PBC28193.1    GBXI01001246    GBXI01000160    JAD13046.1    JAD14132.1    GDHF01032785    GDHF01002196    JAI19529.1    JAI50118.1    APGK01024675    KB740558    ENN80359.1    GAKP01022340    JAC36612.1    AJVK01002388    JXJN01023741    JXJN01023742    CM000361    CM002910    EDX05096.1    KMY90323.1    GBHO01029892    GBHO01003875    GBHO01003862    JAG13712.1    JAG39729.1    JAG39742.1    CH916368    EDW02843.1    CH963913    EDW77477.1    GBHO01035344    GBHO01029891    GBHO01029887    JAG08260.1    JAG13713.1    JAG13717.1    CH902620    EDV30712.1    CH479184    EDW37047.1    CH379058    EAL34422.1    BT132752    AE014134    AET07635.1    AHN54463.1    AHN54464.1    AY069438    BT011332    AAF53435.1    AAR96124.1    CH933807    EDW11778.1    KRG02912.1    KRG02913.1    CM000157    EDW89782.1    CH480818    EDW51799.1    CH954177    EDV57994.1    CVRI01000038    CRK93947.1    OUUW01000046    SPP90008.1    JXUM01110817    KQ565447    KXJ70961.1    GGFK01001253    MBW34574.1    GFXV01001199    MBW13004.1    GGMR01019527    MBY32146.1    GGMR01003153    MBY15772.1    GGFJ01000103    MBW49244.1    ABLF02026551    ABLF02026555    CCAG010021883    GGFL01002524    MBW66702.1    PNF26022.1    GDIP01108971    JAL94743.1    GDIP01199210    JAJ24192.1    GDIP01108970    JAL94744.1    GDIP01140317    LRGB01002190    JAL63397.1    KZS08627.1    GDIQ01111114    JAL40612.1    GDIP01185561    JAJ37841.1   
Pfam
PF00373   FERM_M        + More
PF00612   IQ
PF00784   MyTH4
PF00063   Myosin_head
PF00018   SH3_1
PF16087   DUF4817
PF15866   DUF4729
PF07653   SH3_2
PF09379   FERM_N
Interpro
IPR035963   FERM_2        + More
IPR036106   MYSc_Myo7       
IPR041793   MyoVII_FERM_C1       
IPR008989   Myosin_S1_N       
IPR038185   MyTH4_dom_sf       
IPR019749   Band_41_domain       
IPR001452   SH3_domain       
IPR000857   MyTH4_dom       
IPR000048   IQ_motif_EF-hand-BS       
IPR014352   FERM/acyl-CoA-bd_prot_sf       
IPR000299   FERM_domain       
IPR041794   MyoVII_FERM_C2       
IPR027417   P-loop_NTPase       
IPR029071   Ubiquitin-like_domsf       
IPR036028   SH3-like_dom_sf       
IPR036961   Kinesin_motor_dom_sf       
IPR019748   FERM_central       
IPR011993   PH-like_dom_sf       
IPR001609   Myosin_head_motor_dom       
IPR032135   DUF4817       
IPR031732   DUF4729       
IPR018979   FERM_N       
SUPFAM
SSF54236   SSF54236        + More
SSF50044   SSF50044       
SSF47031   SSF47031       
SSF52540   SSF52540       
PDB
3PVL     E-value=0,     Score=2267

Ontologies

Topology

Subcellular location
Cytoplasm  
Cell cortex   In scolopale cells (radially organized units in the Johnston's organ), protein is concentrated along actin-rich scolopale rods and more apically near scolopale cell-cap cell junctions (PubMed:15886106). In neurons, protein is concentrated near the basal body where neurons are tethered to the scolopale cell (PubMed:15886106). In germline and associated somatic cells of the ovary, it has a punctate distribution and associates with specific F-actin cell structures (PubMed:25236597). In germline cells, expressed in the F-actin-rich cytocortex of the oocyte (from stage 3, peaking at stages 9 to 10a) and in the cortex of nurse cells (from stage 6) (PubMed:25236597). Expressed in the microvilli and terminal web of follicle cells (PubMed:25236597). High expression at the base of the follicle cell microvilli in the brush border (PubMed:25236597).   With evidence from 10 publications.
Cell projection   In scolopale cells (radially organized units in the Johnston's organ), protein is concentrated along actin-rich scolopale rods and more apically near scolopale cell-cap cell junctions (PubMed:15886106). In neurons, protein is concentrated near the basal body where neurons are tethered to the scolopale cell (PubMed:15886106). In germline and associated somatic cells of the ovary, it has a punctate distribution and associates with specific F-actin cell structures (PubMed:25236597). In germline cells, expressed in the F-actin-rich cytocortex of the oocyte (from stage 3, peaking at stages 9 to 10a) and in the cortex of nurse cells (from stage 6) (PubMed:25236597). Expressed in the microvilli and terminal web of follicle cells (PubMed:25236597). High expression at the base of the follicle cell microvilli in the brush border (PubMed:25236597).   With evidence from 10 publications.
Microvillus   In scolopale cells (radially organized units in the Johnston's organ), protein is concentrated along actin-rich scolopale rods and more apically near scolopale cell-cap cell junctions (PubMed:15886106). In neurons, protein is concentrated near the basal body where neurons are tethered to the scolopale cell (PubMed:15886106). In germline and associated somatic cells of the ovary, it has a punctate distribution and associates with specific F-actin cell structures (PubMed:25236597). In germline cells, expressed in the F-actin-rich cytocortex of the oocyte (from stage 3, peaking at stages 9 to 10a) and in the cortex of nurse cells (from stage 6) (PubMed:25236597). Expressed in the microvilli and terminal web of follicle cells (PubMed:25236597). High expression at the base of the follicle cell microvilli in the brush border (PubMed:25236597).   With evidence from 10 publications.
Length:
1945
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
8.43576999999994
Exp number, first 60 AAs:
0.00451
Total prob of N-in:
0.37085
outside
1  -  1945
 
 

Population Genetic Test Statistics

Pi
219.2602
Theta
160.964018
Tajima's D
1.267199
CLR
0.340378
CSRT
0.732913354332283
Interpretation
Uncertain
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