Silkworm Genome Informatics Database

Gene

KWMTBOMO02221

Pre Gene Modal

BGIBMGA003118

Annotation

PREDICTED:_centromere_protein_I-like_[Bombyx_mori]

Location

Bomo_Chr4(-):14195480-14205671 View in EpiBrowser

Location in the cell

Nuclear Reliability : 1.079 PlasmaMembrane Reliability : 1.329

CDS

ATGTGTGACATAGGGGAAATAATTGACTATATTAAGTCATTGAAGAGAGGTTTTGACAAAGATTTATTTCAAAGTAAAATTGACGAATTAGGTTACATTGTTGACTCTGTGGGTTTGGATTATGATGATTTTCACACACTATTTAAAATTTGGCTTAACTTATCTATACCTTTAACAAAATGGACAAGTCTCGGGGCGTGCTTGATACCTCCAGATGCAGTGGAGGAAAAGACAGTGGATTATGCTATTCAGTGGATACTCATAAATTATGGAAATCAAAATTCATTTACCAAGACTGGATTTCTCCTCGACTGGCTCACAGCTGCCATGGAATGTGACTGCATCGATATGAAGGCCTTAGATTTTGGATATGAGCTTTTCTACTCCATGATGACCTATGAAACTCTGACTCCTCAAGCTGTTAAATTAGTGTATACATTGACAAAGCCATCAGATGTGACGAGAAGAAGAGTTATAGAAATTCTTGATTGTGCTAAGAAGAGGGAAAGTAAAAAGAATTTGTTCCGTCAACTGCAAATTCTGCTTGGTTTGTTCAAATCTTACAAGCCTGAGTGTGTCCCGGAAAATGTACCGGCCATCTGTGTACATACAGCATTTAAGAAAATAAACAAAGATTTACTTGGCAGGTTTAAAAGAACTCAGGAGCGGAGAAACCGACAAAGTAAAGAAAAACAACACTTGATATGGCTAAATCCAATTAACATGGCTAGAGGTCGCAATAAAAAAATAGTACCACTGGTACCAAACATGGAGTTCTTCAACATTGGATCTAAACAGTATGATCAAAAAGAACCGCAGAAGAATTACCTGGATTTTTCAGACCCGGCGTCGGTGGTGCAGCTGGCGGCTTGCGGGCGGGCGGCGCGGCCGGCGCGGCTGCGTGCGCTGCTGTGCGGGCCGGCGCTGCTGCTGGCCGCCGCCGCCGCCGACCAGCACGCCTTCCTCTCGCACGACCTGCGGCATCTGCTCGACAACTGTTTCTTAGACATATCACCCTACAGCTATGCCGAGAAACAAGATTTGCTACAAAGACTGGCCCTCTTACAAAGTACTTTATTGCAAGGCATCCCTGTCATCACCAGATTTTTGGCGCAGTTCTTGCCTCTATGGAATGAGAGAGATTACTTTACAGAGATCTTGCAGCTAGTGGAGTGGGTGAGTGTGGACAGTCCGGATCACCTGGGCTACATAGTGGGTCCCCTCATTAAGATATATCATCGGGCTCAACCATTGGAACAATGCGCCATACTCAAGAGCCTTACACAGATGTACATTAATCTTGTATACGCCAGTACGCGGCGTCGGCAATTCTTCATGGCGATTGACACGCCTAAAGAGAATTACGATGTCGTGTTGCCGAGGTTGGCGGCGGAGCTGGGGGAAATGGGCGAAAAAGCCCTGCAGTACAACCCGGATGATATGAGAGTATTATTCAGCAACATATGGTCAGTTGAGTGTCGTTCGCGCGCTCACCTACTGTACAACATAGGGCTGGGACCAATACCAGGATTGTTGTCATTGTCATTGCCATTGTTAGGAGTTTCGGCGGCTTTAATCGAGAAGATGGCTGCTCTGTTGGTTATATACAAAAAGATCTTCACTCGCCTCAAATCGACGAATGCGATCAGCGCGACTCACACGGAGCAGATACAGATACTGCACAGGTACTCGGTGGACCTCAGCTCGCTGTACACGGAGGAGTCGCTCAGGGGCCGCGGCAACGGCTTCGTGTTCGACAAACTACATCCCCAGCTCGTCTCGAAACTGTACCATCTGATCCCCGAGCCGGATACCAAGTTGAGCGTACGGAGTCACGTAGCCTTCGCTGCGTACACGTACGTCGCGCTGGGTGACGTCGACGAGCGCGACGCCGACAACAAGGCGTGGTACCGCGCGTTTCTGGAACACGAATTCTCGTATTTGGCCAAGTTTTTCAAGAAAACCGTACCCGAGCTGAGAATGTGA

Protein

MCDIGEIIDYIKSLKRGFDKDLFQSKIDELGYIVDSVGLDYDDFHTLFKIWLNLSIPLTKWTSLGACLIPPDAVEEKTVDYAIQWILINYGNQNSFTKTGFLLDWLTAAMECDCIDMKALDFGYELFYSMMTYETLTPQAVKLVYTLTKPSDVTRRRVIEILDCAKKRESKKNLFRQLQILLGLFKSYKPECVPENVPAICVHTAFKKINKDLLGRFKRTQERRNRQSKEKQHLIWLNPINMARGRNKKIVPLVPNMEFFNIGSKQYDQKEPQKNYLDFSDPASVVQLAACGRAARPARLRALLCGPALLLAAAAADQHAFLSHDLRHLLDNCFLDISPYSYAEKQDLLQRLALLQSTLLQGIPVITRFLAQFLPLWNERDYFTEILQLVEWVSVDSPDHLGYIVGPLIKIYHRAQPLEQCAILKSLTQMYINLVYASTRRRQFFMAIDTPKENYDVVLPRLAAELGEMGEKALQYNPDDMRVLFSNIWSVECRSRAHLLYNIGLGPIPGLLSLSLPLLGVSAALIEKMAALLVIYKKIFTRLKSTNAISATHTEQIQILHRYSVDLSSLYTEESLRGRGNGFVFDKLHPQLVSKLYHLIPEPDTKLSVRSHVAFAAYTYVALGDVDERDADNKAWYRAFLEHEFSYLAKFFKKTVPELRM

Uniprot

A0A2H1VC31 S4P9K1 A0A212FDC8 A0A2A4JBP3 A0A194PMS0 A0A0C9R4Q2 + More
A0A3L8DAX7 A0A158P3M4 A0A151XG38 A0A026WKR1 F4W4S7 A0A195F031

Pubmed

23622113 22118469 26354079 30249741 21347285 24508170 + More
21719571

EMBL

ODYU01001760 SOQ38403.1 GAIX01003724 JAA88836.1 AGBW02009066 OWR51765.1 + More
NWSH01002118 PCG69118.1 KQ459598 KPI94612.1 GBYB01001791 JAG71558.1 QOIP01000010 RLU17461.1 ADTU01008262 KQ982174 KYQ59336.1 KK107167 EZA56256.1 GL887553 EGI70796.1 KQ981880 KYN33930.1

Proteomes

UP000007151 UP000218220 UP000053268 UP000279307 UP000005205 UP000075809 + More
UP000053097 UP000007755 UP000078541

Pfam

PF07778 CENP-I

Interpro

IPR012485 CENP-I

ProteinModelPortal

A0A2H1VC31 S4P9K1 A0A212FDC8 A0A2A4JBP3 A0A194PMS0 A0A0C9R4Q2 + More
A0A3L8DAX7 A0A158P3M4 A0A151XG38 A0A026WKR1 F4W4S7 A0A195F031

KEGG

101739229 K11501 centromere protein I | (RefSeq) centromere protein I-like

GO

GO:0000776 GO:0034508 GO:0005622 GO:0006414 GO:0005515 GO:0017048 GO:0051603 GO:0008483 GO:0006418 GO:0016507 GO:0048384

Length:

661

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

11.24458

Exp number, first 60 AAs:

0.00294

Total prob of N-in:

0.01101

outside

1 - 661

Pi

297.613569

Theta

191.493457

Tajima's D

-2.331926

CLR

0.283247

CSRT

0.00229988500574971

Interpretation

Possibly Positive selection

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics