Gene

KWMTBOMO02220

Pre Gene Modal

BGIBMGA003040

Annotation

PREDICTED:_uncharacterized_protein_LOC101740515_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr4(+):14154132-14154923      View in EpiBrowser

Transcription factor

HTH

Location in the cell

Mitochondrial   Reliability : 1.942 Nuclear   Reliability : 1.825

CDS

ATGGTCAGAAAATACGAAAGAATGAGCGGCCGTCAGTCCTGGAATGAAGAAGATATGGCAAAGGCTGTCGCCGCTGTCGTCTCAGGTAAGATGGGCTACAAGTTGGCATCCAGGACCTACCATATACCGCGGTCTACTCTCCAGCGACGCGCCAGCAAGATACGGTATCAGCAACCAGACGAACCCAAGCCACTAATGGGGCACTACAGAAGGGTGTTCACTGATAGTCAAGAGAAAGACTTAGTTGGCTATATCAAAAGTATGGAAAAGTACTTTATGGGAGTCTCCCGAAGGGACATCAGAGAACTGGCATTTCAATACGCCGAAGACAACCATCTAAACCATCCCTTCGATGTAAACAGCCGAATGGCCGGAGAAGATTGGGTGCGAAACTTCCTGAAGCGCAATCCAGAACTCTTGGATAGATCCGACCACGAGAACATCCTAGAACCGGTTAATTTTGACCAATTCTATCATTTCATGTGTCAACTATCATGA

Protein

MVRKYERMSGRQSWNEEDMAKAVAAVVSGKMGYKLASRTYHIPRSTLQRRASKIRYQQPDEPKPLMGHYRRVFTDSQEKDLVGYIKSMEKYFMGVSRRDIRELAFQYAEDNHLNHPFDVNSRMAGEDWVRNFLKRNPELLDRSDHENILEPVNFDQFYHFMCQLS

Uniprot

H9J0K3   A0A2A4JB92   A0A212FHR3   A0A0L7KVG7   A0A194R3F7   A0A194PNQ2   + More
S4PHB2   A0A1E1WAG7   A0A1B6L3T1   A0A1Y1MUL7   A0A1Y1K9Z4   A0A2H1VTA0   A0A1B6LLE7   A0A1Y1NJC0   A0A1Y1NGN4   A0A3Q0JIB2   A0A3L8DD48   J9LG75   J9JKJ5   A0A146KT86   A0A2H8TEI8   A0A1Y1JVK5   A0A1Y1NBL1   W4ZKV9   K7IN68   T1FFC3   T1FBR9   A0A232EV49   T1EWT4   T1FAC4   T1FGF6   T1EZV8   A0A212EU96   A0A1S3D1W0   T1F601   A0A1Y1LS13   T1END8   V4APS8   A0A1Y1LS50   A0A1B6JFQ6   A0A1Y1NBD5   K7JTE3   A0A1Y1LFM2   T1ICM1   J9KB99   T1FJV7   T1HKC3   T1F0Q2   A0A1Y1LR24   A0A2A4J0W1   A0A2P8XN66   A0A3L8DLV9   J9LBS3   A0A1Y1L660   A0A1W4XQ86   A0A0L7KY78   A0A1W4VE81   E9IWD6   A0A232F0H4   A0A0J7JY26   A0A0J7K472   A0A1S3DAF7   A0A232EDE8   V5GKW5   J9LWV0   A0A2A4J740   T1F5J1   T1EQM1   J9KKA5   A0A232FEU2   A0A1B6ME32   A0A0L7KY15   A0A2A4J792   K7J917   A0A2A4J6W1   A0A2G8LK40   B0X132   A0A1Y1M0X3   T1EJ72   A0A2A4J258   A0A2C9KFG9   A0A232EWE3   A0A0A9XB25   A0A2A4JD21   T1EJ73   A0A2A4J1M3   A0A2P8Y7N1   A0A1B6KS53   A0A2P8XAU1   A0A2A4JLU0   A0A2A4K2E5   A0A1B6D767   A0A026VT80   X1XGE9   A0A1B6CNF6   A0A1B6LHI0  

Pubmed

19121390    22118469    26227816    26354079    23622113    28004739    + More
30249741    26823975    20075255    23254933    28648823    29403074    21282665    29023486    15562597    25401762    24508170   

EMBL

BABH01010298    NWSH01002118    PCG69119.1    AGBW02008477    OWR53256.1    JTDY01005368    + More
KOB67076.1    KQ460779    KPJ12227.1    KQ459598    KPI94613.1    GAIX01005855    JAA86705.1    GDQN01007081    JAT83973.1    GEBQ01021595    JAT18382.1    GEZM01026324    JAV87047.1    GEZM01088155    JAV58299.1    ODYU01004314    SOQ44057.1    GEBQ01015395    JAT24582.1    GEZM01002998    JAV97000.1    GEZM01002997    JAV97001.1    QOIP01000010    RLU18063.1    ABLF02009840    ABLF02016204    ABLF02004627    ABLF02004628    ABLF02034930    GDHC01018928    JAP99700.1    GFXV01000711    MBW12516.1    GEZM01099403    GEZM01099402    JAV53344.1    GEZM01007307    JAV95253.1    AAGJ04133215    AAGJ04133216    AMQM01007068    KB097558    ESN94903.1    AMQM01006077    KB097269    ESN97849.1    NNAY01002052    OXU22234.1    AMQM01002059    KB097700    ESN91415.1    AMQM01005598    AMQM01005599    KB097026    ESN99962.1    AMQM01007412    KB097612    ESN93398.1    AMQM01002854    KB095905    ESO10016.1    AGBW02012433    OWR45073.1    AMQM01004377    KB096502    ESO04455.1    GEZM01048710    JAV76484.1    AMQM01000154    KB095811    ESO12383.1    KB201362    ESO96795.1    GEZM01048707    JAV76492.1    GECU01025373    GECU01009580    JAS82333.1    JAS98126.1    GEZM01007306    JAV95254.1    GEZM01058773    JAV71681.1    ACPB03009022    ABLF02022753    AMQM01008870    KB095865    ESO10484.1    ACPB03017843    AMQM01002986    KB095959    ESO09553.1    GEZM01050942    GEZM01050941    GEZM01050940    GEZM01050939    JAV75288.1    NWSH01004485    PCG65052.1    PYGN01001677    PSN33426.1    QOIP01000006    RLU21203.1    ABLF02026665    GEZM01067612    JAV67475.1    JTDY01004407    KOB68203.1    GL766495    EFZ15117.1    NNAY01001374    OXU24195.1    LBMM01021832    KMQ83002.1    LBMM01014670    KMQ85084.1    NNAY01006779    OXU16358.1    GALX01007438    JAB61028.1    ABLF02010765    ABLF02010766    NWSH01002782    PCG67546.1    AMQM01004277    ESO04218.1    AMQM01000642    KB096324    ESO06516.1    ABLF02006839    NNAY01000314    OXU29281.1    GEBQ01005828    JAT34149.1    JTDY01004613    KOB67946.1    NWSH01002570    PCG67955.1    AAZX01006942    NWSH01002933    PCG67263.1    PCG67264.1    MRZV01000053    PIK60582.1    DS232251    EDS38424.1    GEZM01047343    JAV76877.1    AMQM01007182    KB097579    ESN93974.1    NWSH01003844    PCG65768.1    NNAY01001872    OXU22675.1    GBHO01026440    JAG17164.1    NWSH01002054    PCG69293.1    AMQM01000552    ESO06091.1    PCG65769.1    PYGN01000838    PSN40164.1    GEBQ01025710    JAT14267.1    PYGN01006903    PSN29111.1    NWSH01001026    PCG73045.1    NWSH01000241    PCG78074.1    GEDC01015776    JAS21522.1    KK108004    EZA46988.1    ABLF02020045    GEDC01022355    JAS14943.1    GEBQ01016933    JAT23044.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000037510    UP000053240    UP000053268    + More
UP000079169    UP000279307    UP000007819    UP000007110    UP000002358    UP000015101    UP000215335    UP000030746    UP000015103    UP000245037    UP000192223    UP000192221    UP000036403    UP000230750    UP000002320    UP000076420    UP000053097   

PRIDE

H9J0K3   

Pfam

PF03221   HTH_Tnp_Tc5        + More
PF05225   HTH_psq
PF03184   DDE_1
PF12012   DUF3504
PF04218   CENP-B_N

Interpro

IPR007889   HTH_Psq        + More
IPR009057   Homeobox-like_sf       
IPR006600   HTH_CenpB_DNA-bd_dom       
IPR004875   DDE_SF_endonuclease_dom       
IPR011011   Znf_FYVE_PHD       
IPR001965   Znf_PHD       
IPR013083   Znf_RING/FYVE/PHD       
IPR011010   DNA_brk_join_enz       
IPR021893   DUF3504       
IPR013762   Integrase-like_cat_sf       
IPR019786   Zinc_finger_PHD-type_CS       
IPR036880   Kunitz_BPTI_sf       
IPR036388   WH-like_DNA-bd_sf       
IPR007110   Ig-like_dom       
IPR036236   Znf_C2H2_sf       
IPR013087   Znf_C2H2_type       

SUPFAM

SSF46689   SSF46689        + More
SSF57903   SSF57903       
SSF56349   SSF56349       
SSF57362   SSF57362       
SSF57667   SSF57667       

Gene 3D

3.30.40.10     1.10.443.10     1.10.10.10    

ProteinModelPortal

H9J0K3   A0A2A4JB92   A0A212FHR3   A0A0L7KVG7   A0A194R3F7   A0A194PNQ2   + More
S4PHB2   A0A1E1WAG7   A0A1B6L3T1   A0A1Y1MUL7   A0A1Y1K9Z4   A0A2H1VTA0   A0A1B6LLE7   A0A1Y1NJC0   A0A1Y1NGN4   A0A3Q0JIB2   A0A3L8DD48   J9LG75   J9JKJ5   A0A146KT86   A0A2H8TEI8   A0A1Y1JVK5   A0A1Y1NBL1   W4ZKV9   K7IN68   T1FFC3   T1FBR9   A0A232EV49   T1EWT4   T1FAC4   T1FGF6   T1EZV8   A0A212EU96   A0A1S3D1W0   T1F601   A0A1Y1LS13   T1END8   V4APS8   A0A1Y1LS50   A0A1B6JFQ6   A0A1Y1NBD5   K7JTE3   A0A1Y1LFM2   T1ICM1   J9KB99   T1FJV7   T1HKC3   T1F0Q2   A0A1Y1LR24   A0A2A4J0W1   A0A2P8XN66   A0A3L8DLV9   J9LBS3   A0A1Y1L660   A0A1W4XQ86   A0A0L7KY78   A0A1W4VE81   E9IWD6   A0A232F0H4   A0A0J7JY26   A0A0J7K472   A0A1S3DAF7   A0A232EDE8   V5GKW5   J9LWV0   A0A2A4J740   T1F5J1   T1EQM1   J9KKA5   A0A232FEU2   A0A1B6ME32   A0A0L7KY15   A0A2A4J792   K7J917   A0A2A4J6W1   A0A2G8LK40   B0X132   A0A1Y1M0X3   T1EJ72   A0A2A4J258   A0A2C9KFG9   A0A232EWE3   A0A0A9XB25   A0A2A4JD21   T1EJ73   A0A2A4J1M3   A0A2P8Y7N1   A0A1B6KS53   A0A2P8XAU1   A0A2A4JLU0   A0A2A4K2E5   A0A1B6D767   A0A026VT80   X1XGE9   A0A1B6CNF6   A0A1B6LHI0  

KEGG

101740515    no KO assigned | (RefSeq) uncharacterized LOC101740515

GO

GO:0003677   GO:0005634   GO:0046872   GO:0016021   GO:0006310   GO:0051607   GO:0015074   GO:0005739   GO:0004867   GO:0003676   GO:0005622   GO:0006414   GO:0005515   GO:0017048   GO:0051603   GO:0008483   GO:0006418   GO:0016507   GO:0048384  

Subcellular location

Nucleus  

Length:

165

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01438

Exp number, first 60 AAs:

0.01438

Total prob of N-in:

0.35689

outside

1  -  165

 

 

Pi

12.47138

Theta

11.897999

Tajima's D

-0.248502

CLR

1.437228

CSRT

0.307734613269337

Interpretation

Uncertain