Gene

KWMTBOMO02216  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002348

Annotation

elongation_factor_Ts_[Bombyx_mori]

Location

Bomo_Chr4(-):14010464-14013901      View in EpiBrowser

Full name

Elongation factor Ts, mitochondrial       + More
Elongation factor Ts      

Location in the cell

Cytoplasmic   Reliability : 2.089

CDS

ATGATTTTCCAGCTGATTCGAAGAATTCATACAAGTCCAGCGTATAAAGCAGCTGAATCTTCGCTGCTTGCTAAACTCCGGAAAAAAACGGGCTACACAATCGCTAATTGCAAGAAAGCATTAGAAATGCATAATAATGATGCAGATAAGGCTGAGACATGGCTCCATGAACAAGCCCAAGCAATGGGATGGGCAAAGGCAACTAAATTAGCTGGCAGGACGGCCCTCCAGGGGTTGGTAGCTGTTAAGTTTGACAAGAACCATGGTGCTCTGGTGGAACTCAACTGTGAAACTGATTTTGTGGCCAAGAACGACAAGTTTCAGAAAATGATTGAAGATGCAGCTATAGCCTCATTCAAATTCGCTCATACTAAACTGCAAGCTAAAGGACCTATAACAAAAATGGAGCTAGACAGTGAACAGCTCGGGACATTACATGCAGAAGGTGGAAAAAAATTGTCTGAAATATTGGCACTCTTTATTGGCTCTGTCGGTGAAAATGCAGTGCTGAGGCGTGCCGAGTGCTGGAAAGCGAACAGCGAGGATGTCAAGATCGCAGGTTATACCCATCCAGCGCCTAGCAGTTCTAGTGATTATTCCTCTGGAAAATATGGGGCCCTGCTCGCTTACAAACAGCCAAACGACGTAGAAGACATCGGCCGGCAACTATGCCAGCACATCGTCGGCTGTGCACCCACAAAAATCGGTGACAAAGAAAAAGACAAACCAGCTAAGAACTCAGATGATGAAACATGTCTTATTTTCCAGGAATACTTGCTCGATCCATCCTATACGATTGAGGAAATCTTACAGAAACACAATGTTGAAATCATTGATTATGTTAGATTCTCTTGCGGAGAAGTACCTGAATCTTGTATGCCAGGAGTCGAAAAGCAACCTTTAGAAACAGTACAAACTCTGCAGTAA

Protein

MIFQLIRRIHTSPAYKAAESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQAMGWAKATKLAGRTALQGLVAVKFDKNHGALVELNCETDFVAKNDKFQKMIEDAAIASFKFAHTKLQAKGPITKMELDSEQLGTLHAEGGKKLSEILALFIGSVGENAVLRRAECWKANSEDVKIAGYTHPAPSSSSDYSSGKYGALLAYKQPNDVEDIGRQLCQHIVGCAPTKIGDKEKDKPAKNSDDETCLIFQEYLLDPSYTIEEILQKHNVEIIDYVRFSCGEVPESCMPGVEKQPLETVQTLQ

Description

Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome.

Similarity

Belongs to the EF-Ts family.

Keywords

Complete proteome   Elongation factor   Mitochondrion   Protein biosynthesis   Reference proteome   Transit peptide  

Feature

chain  Elongation factor Ts, mitochondrial

Uniprot

Q1HQ90   A0A194PMF3   A0A194R3G3   A0A2A4JRG4   A0A2A4JRL6   A0A2H1W141   + More
A0A212FHP8   A0A0L7LF35   S4PM30   Q17PI0   U5ES43   A0A182G5Y2   A0A067RJI5   K7IQU0   A0A232FBL8   A0A1Y1JYS9   B0WC25   B4Q7Z2   A0A1Q3FBV9   B4I5B7   A0A182MH27   A0A1W4UL41   A0A0L0C402   B4P8Q7   B3NMG3   Q9VJC7   A0A0C9R847   B4JC90   A0A182PAM8   A0A2M4BTT3   A0A2Y9D1U3   A0A2M4BTS4   A0A2M3Z7N6   D6WNZ5   A0A1W4X9X0   A0A182KH07   A0A2M4BSV0   A0A2M3Z7J7   A0A182QW97   A0A2M4CUH6   W5JT92   A0A1A9WZZ2   N6TZU7   A0A034WGZ4   A0A2M4ANH1   A0A2M4ANL1   A0A084VY74   T1DKY1   A0A2M4AP30   A0A182UAT7   A0A182JJN7   A0A1B0AJN3   A0A1S4H0G1   A0A182I5B4   A0A0K8VTW2   Q7PVN3   A0A0M3QTD0   A0A182VCT3   B4LSU6   A0A182Y9W9   T1PAS3   A0A1J1HPB4   A0A0A1WPW7   B4KEE0   A0A1A9UMG3   W8CBU2   A0A1I8M3T7   A0A1B0BRI3   A0A1A9Y773   A0A182WHB0   A0A1B0G3M0   B3MMH1   A0A182XKT1   A0A182NF87   A0A182FWG5   A0A151J8R1   E9J398   A0A182KU98   A0A1I8NR52   A0A026X5J8   A0A151I6P8   F4WU57   Q29LB7   B4GQA6   A0A0L7QVX8   A0A151X073   A0A151I028   E2C835   A0A2A3EIN6   A0A348G621   A0A158NLU2   A0A195FWQ9   A0A154P4V7   A0A3B0K922   E2AHM1   B4MYV9   A3EXL6   A0A088A1L8  

Pubmed

26354079    22118469    26227816    23622113    17510324    26483478    + More
24845553    20075255    28648823    28004739    17994087    22936249    26108605    17550304    10731132    12537572    12537569    18362917    19820115    20920257    23761445    23537049    25348373    24438588    12364791    25244985    25830018    18057021    24495485    25315136    21282665    20966253    24508170    30249741    21719571    15632085    20798317    21347285   

EMBL

DQ443162    ABF51251.1    KQ459598    KPI94616.1    KQ460779    KPJ12232.1    + More
NWSH01000819    PCG74053.1    PCG74052.1    ODYU01005579    SOQ46562.1    AGBW02008477    OWR53259.1    JTDY01001388    KOB73994.1    GAIX01003760    JAA88800.1    CH477191    GANO01002531    JAB57340.1    JXUM01146978    KQ570274    KXJ68401.1    KK852432    KDR23982.1    NNAY01000461    OXU28221.1    GEZM01100259    JAV52940.1    DS231884    CM000361    CM002910    EDX05325.1    KMY90726.1    GFDL01010046    JAV24999.1    CH480822    EDW55573.1    AXCM01000590    JRES01000934    KNC27088.1    CM000158    EDW90165.1    CH954179    EDV54834.1    AE014134    AY051938    GBYB01007720    GBYB01012574    JAG77487.1    JAG82341.1    CH916368    EDW04123.1    GGFJ01007349    MBW56490.1    GGFJ01007262    MBW56403.1    GGFM01003773    MBW24524.1    KQ971343    EFA03187.2    GGFJ01006933    MBW56074.1    GGFM01003741    MBW24492.1    AXCN02000824    GGFL01004795    MBW68973.1    ADMH02000504    ETN66170.1    APGK01044884    APGK01044885    KB741028    KB631789    ENN74820.1    ERL86096.1    GAKP01005542    GAKP01005541    JAC53410.1    GGFK01009002    MBW42323.1    GGFK01009001    MBW42322.1    ATLV01018324    KE525231    KFB42918.1    GAMD01000711    JAB00880.1    GGFK01009208    MBW42529.1    AAAB01008984    APCN01003844    GDHF01010000    GDHF01001784    JAI42314.1    JAI50530.1    EAA14750.5    CP012523    ALC38669.1    CH940649    EDW64857.1    KA645842    AFP60471.1    CVRI01000015    CRK89896.1    GBXI01013829    GBXI01003789    JAD00463.1    JAD10503.1    CH933807    EDW12908.1    KRG03481.1    GAMC01004516    JAC02040.1    JXJN01019122    CCAG010019639    CH902620    EDV30917.1    KQ979548    KYN21071.1    GL768059    EFZ12704.1    KK107019    QOIP01000007    EZA62719.1    RLU20016.1    KQ978524    KYM93366.1    GL888349    EGI62284.1    CH379060    EAL34128.1    CH479187    EDW39778.1    KQ414722    KOC62699.1    KQ982635    KYQ53325.1    KQ976699    KYM77419.1    GL453538    EFN75888.1    KZ288250    PBC31069.1    FX985560    BBF97894.1    ADTU01019865    KQ981241    KYN44279.1    KQ434819    KZC06882.1    OUUW01000004    SPP80028.1    GL439566    EFN67055.1    CH963913    EDW77298.1    EF091934    ABN11926.1   

Proteomes

UP000053268    UP000053240    UP000218220    UP000007151    UP000037510    UP000008820    + More
UP000069940    UP000249989    UP000027135    UP000002358    UP000215335    UP000002320    UP000000304    UP000001292    UP000075883    UP000192221    UP000037069    UP000002282    UP000008711    UP000000803    UP000001070    UP000075885    UP000075900    UP000007266    UP000192223    UP000075881    UP000075886    UP000000673    UP000091820    UP000019118    UP000030742    UP000030765    UP000075902    UP000075880    UP000092445    UP000075840    UP000007062    UP000092553    UP000075903    UP000008792    UP000076408    UP000183832    UP000009192    UP000078200    UP000095301    UP000092460    UP000092443    UP000075920    UP000092444    UP000007801    UP000076407    UP000075884    UP000069272    UP000078492    UP000075882    UP000095300    UP000053097    UP000279307    UP000078542    UP000007755    UP000001819    UP000008744    UP000053825    UP000075809    UP000078540    UP000008237    UP000242457    UP000005205    UP000078541    UP000076502    UP000268350    UP000000311    UP000007798    UP000005203   

PRIDE

Q1HQ90    Q17PI0    B0WC25    Q9VJC7   

Pfam

PF00889   EF_TS        + More
PF04923   Ninjurin

Interpro

IPR014039   Transl_elong_EFTs/EF1B_dimer        + More
IPR009060   UBA-like_sf       
IPR036402   EF-Ts_dimer_sf       
IPR001816   Transl_elong_EFTs/EF1B       
IPR018101   Transl_elong_Ts_CS       
IPR007007   Ninjurin       

SUPFAM

SSF46934   SSF46934        + More
SSF54713   SSF54713       

Gene 3D

3.30.479.20    

ProteinModelPortal

Q1HQ90   A0A194PMF3   A0A194R3G3   A0A2A4JRG4   A0A2A4JRL6   A0A2H1W141   + More
A0A212FHP8   A0A0L7LF35   S4PM30   Q17PI0   U5ES43   A0A182G5Y2   A0A067RJI5   K7IQU0   A0A232FBL8   A0A1Y1JYS9   B0WC25   B4Q7Z2   A0A1Q3FBV9   B4I5B7   A0A182MH27   A0A1W4UL41   A0A0L0C402   B4P8Q7   B3NMG3   Q9VJC7   A0A0C9R847   B4JC90   A0A182PAM8   A0A2M4BTT3   A0A2Y9D1U3   A0A2M4BTS4   A0A2M3Z7N6   D6WNZ5   A0A1W4X9X0   A0A182KH07   A0A2M4BSV0   A0A2M3Z7J7   A0A182QW97   A0A2M4CUH6   W5JT92   A0A1A9WZZ2   N6TZU7   A0A034WGZ4   A0A2M4ANH1   A0A2M4ANL1   A0A084VY74   T1DKY1   A0A2M4AP30   A0A182UAT7   A0A182JJN7   A0A1B0AJN3   A0A1S4H0G1   A0A182I5B4   A0A0K8VTW2   Q7PVN3   A0A0M3QTD0   A0A182VCT3   B4LSU6   A0A182Y9W9   T1PAS3   A0A1J1HPB4   A0A0A1WPW7   B4KEE0   A0A1A9UMG3   W8CBU2   A0A1I8M3T7   A0A1B0BRI3   A0A1A9Y773   A0A182WHB0   A0A1B0G3M0   B3MMH1   A0A182XKT1   A0A182NF87   A0A182FWG5   A0A151J8R1   E9J398   A0A182KU98   A0A1I8NR52   A0A026X5J8   A0A151I6P8   F4WU57   Q29LB7   B4GQA6   A0A0L7QVX8   A0A151X073   A0A151I028   E2C835   A0A2A3EIN6   A0A348G621   A0A158NLU2   A0A195FWQ9   A0A154P4V7   A0A3B0K922   E2AHM1   B4MYV9   A3EXL6   A0A088A1L8  

PDB

1XB2     E-value=7.90232e-49,     Score=488

KEGG

732893    K02357 elongation factor Ts | (RefSeq) elongation factor Ts

GO

GO:0003746   GO:0005739   GO:0006414   GO:0005759   GO:0070125   GO:0016021   GO:0007155   GO:0042246   GO:0005622   GO:0005515   GO:0017048   GO:0051603   GO:0008483   GO:0006418   GO:0016507   GO:0048384  

PANTHER

PTHR11741   PTHR12316  

Subcellular location

Mitochondrion  

Length:

308

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00233

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02503

outside

1  -  308

 

 

Pi

315.421231

Theta

241.269133

Tajima's D

0.995917

CLR

0

CSRT

0.654417279136043

Interpretation

Uncertain