Gene

KWMTBOMO02209

Pre Gene Modal

BGIBMGA003037

Annotation

PREDICTED:_cytosolic_carboxypeptidase_6_[Bombyx_mori]

Location

Bomo_Chr4(+):13938292-13940340      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.457

CDS

ATGCTGAACCCCGACGGTGTATTTCTGGGCAACCAACGCGCCGATCTGTTTGGAGCCGACCTAAATCGTTCGTGGAACAGAGCTACGACCTTTGCTCATCCCGCTCTTGTTGCTGTTAACGATCTTATTAAGAAGCTTACTGCGGAGAAGGGCGTCCAACTGGACTTCATTATTGATTTACATGCTGATATAAGTCATGAAGGAGTTTTTGTTCGCGGGAATTCATATGATGACGTCTATAGGTTTGAGCGTCACGCAGTGCTACCTAAATTCTTAGGTGGTCGTATAGAAGCATGGAAAGCAGAGATTTGCCTTTACAACGCTGATCCTATCGTCGCTGGCAGCGCACGAAGAGCTCTTCCAGTTGCTGGCAACATTGACGCTTATTCAATTTTAGTATCGCTTGGTGGGAGACGGCTTAATCCCAGAGGACCTTATTTACATTACACTGAAGATGCTTGTATCCTTTTAAGAATAAGTGATTTTAGATTATGTTAG

Protein

MLNPDGVFLGNQRADLFGADLNRSWNRATTFAHPALVAVNDLIKKLTAEKGVQLDFIIDLHADISHEGVFVRGNSYDDVYRFERHAVLPKFLGGRIEAWKAEICLYNADPIVAGSARRALPVAGNIDAYSILVSLGGRRLNPRGPYLHYTEDACILLRISDFRLC

Uniprot

H9J0K0   A0A2H1VDJ8   A0A212FEH3   A0A194R3Y8   A0A194PNR1   A0A0L7LF39   + More
A0A0L7KSF3   A0A2A4JRH4   A0A2A3EBV4   A0A087ZTQ6   A0A0L7RBK6   K7IPW7   A0A1B0DQG4   A0A0M8ZTI9   E0VBM5   A0A182UNK7   A0A182HGR8   A0A182JX26   A0A182KMA2   A7UVJ6   W5JDL5   A0A182TGL6   A0A182VQS9   A0A182XVA0   A0A182F6V7   A0A1B0CAC9   W8BAZ6   A0A182RP05   A0A182MTY9   A0A182X2P8   D6W7B0   A0A182N503   A0A182GQN1   A0A0J7NKS2   A0A336MLQ2   A0A336LD69   A0A0C9RHE3   B0W961   A0A1I8N3B3   A0A0K8W735   A0A1I8P0G1   A0A1I8P0A2   A0A1B0FRI8   A0A182IPU2   A0A154PNL8   A0A3L8DGL5   A0A2S2QGV8   A0A1D2MQR4   A0A182P5M9   B4JY03   A0A2S2R6K5   A0A0L0BL37   A0A084VRN6   A0A026WCR2   A0A1A9V4Y0   B4LVX9   E9IGR1   A0A1S4FYN1   A0A2S2P3P2   E2AXJ6   E2C5I1   A0A1A9X419   T1JBE5   A0A1J1J836   Q16JW0   A0A0Q9XEW3   B4K9I3   A0A1A9XT99   A0A1B0BEZ8   A0A3B0JET9   A0A226E6K3   A0A0R1E666   A0A0B4KI64   B4PMJ5   A0A0R3NK67   Q29CA4   B4GNE2   A0A1S5QNT4   A0A067RDH5   B3MT97   A0A2S2NWQ7   A0A1A9ZZN3   B4NGX9   A0A1W4W3S6   A0A1W4VQS7   A0A195C706   A0A151X4Q3   U4UVK4   N6T8W7   A0A0M4EGR7   A0A195D7Y1   A0A158NDV9   F4W7W0   A0A195BQQ4   A0A195ES98   T1I9E8   A0A0P5GI85   A0A0N8DCT7   E9FSA0  

Pubmed

19121390    22118469    26354079    26227816    20075255    20566863    + More
20966253    12364791    14747013    17210077    20920257    23761445    25244985    24495485    18362917    19820115    26483478    25315136    30249741    27289101    17994087    26108605    24438588    24508170    21282665    17510324    20798317    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    15632085    23185243    24845553    23537049    21347285    21719571    21292972   

EMBL

BABH01010312    ODYU01001971    SOQ38905.1    AGBW02008931    OWR52149.1    KQ460779    + More
KPJ12239.1    KQ459598    KPI94623.1    JTDY01001388    KOB73999.1    JTDY01006240    KOB66177.1    NWSH01000819    PCG74063.1    KZ288291    PBC29217.1    KQ414617    KOC68195.1    AJVK01019108    KQ435851    KOX70840.1    DS235033    EEB10781.1    APCN01005942    APCN01005943    AAAB01008987    EDO63226.2    ADMH02001524    ETN62191.1    AJWK01003658    GAMC01012377    JAB94178.1    AXCM01001504    KQ971307    EFA11053.2    JXUM01080903    KQ563215    KXJ74270.1    LBMM01003849    KMQ93055.1    UFQT01001311    SSX29959.1    UFQS01002871    UFQT01002871    SSX14811.1    SSX34201.1    GBYB01007705    JAG77472.1    DS231862    EDS39758.1    GDHF01005306    JAI47008.1    CCAG010010739    CCAG010010740    KQ434977    KZC12820.1    QOIP01000008    RLU19590.1    GGMS01007774    MBY76977.1    LJIJ01000711    ODM95105.1    CH916377    EDV90565.1    GGMS01016463    MBY85666.1    JRES01001702    KNC20781.1    ATLV01015761    KE525036    KFB40630.1    KK107274    EZA53723.1    CH940650    EDW67584.1    GL763054    EFZ20191.1    GGMR01011474    MBY24093.1    GL443590    EFN61834.1    GL452770    EFN76794.1    JH432010    CVRI01000075    CRL08551.1    CH477989    EAT34582.1    CH933806    KRG02248.1    EDW16643.1    JXJN01013194    OUUW01000005    SPP80894.1    LNIX01000006    OXA52511.1    CM000160    KRK04685.1    AE014297    AGB96497.1    EDW99129.1    CM000070    KRS99522.1    KRS99523.1    EAL26742.2    CH479186    EDW39268.1    KR068532    AMO02549.1    KK852708    KDR17999.1    CH902623    EDV30487.2    GGMR01009052    MBY21671.1    CH964272    EDW84476.1    KQ978251    KYM95948.1    KQ982548    KYQ55269.1    KB632384    ERL94281.1    APGK01047133    KB741077    ENN74148.1    CP012526    ALC47616.1    KQ981153    KYN08962.1    ADTU01013038    ADTU01013039    GL887888    EGI69630.1    KQ976424    KYM88468.1    KQ981993    KYN30777.1    ACPB03002805    GDIQ01240229    JAK11496.1    GDIP01046351    JAM57364.1    GL732523    EFX90357.1   

Proteomes

UP000005204    UP000007151    UP000053240    UP000053268    UP000037510    UP000218220    + More
UP000242457    UP000005203    UP000053825    UP000002358    UP000092462    UP000053105    UP000009046    UP000075903    UP000075840    UP000075881    UP000075882    UP000007062    UP000000673    UP000075902    UP000075920    UP000076408    UP000069272    UP000092461    UP000075900    UP000075883    UP000076407    UP000007266    UP000075884    UP000069940    UP000249989    UP000036403    UP000002320    UP000095301    UP000095300    UP000092444    UP000075880    UP000076502    UP000279307    UP000094527    UP000075885    UP000001070    UP000037069    UP000030765    UP000053097    UP000078200    UP000008792    UP000000311    UP000008237    UP000091820    UP000183832    UP000008820    UP000009192    UP000092443    UP000092460    UP000268350    UP000198287    UP000002282    UP000000803    UP000001819    UP000008744    UP000027135    UP000007801    UP000092445    UP000007798    UP000192221    UP000078542    UP000075809    UP000030742    UP000019118    UP000092553    UP000078492    UP000005205    UP000007755    UP000078540    UP000078541    UP000015103    UP000000305   

PRIDE

H9J0K0   

Pfam

PF00246   Peptidase_M14        + More
PF18027   Pepdidase_M14_N
PF00067   p450
PF15926   RNF220

Interpro

IPR040626   Pepdidase_M14_N        + More
IPR000834   Peptidase_M14       
IPR036396   Cyt_P450_sf       
IPR002401   Cyt_P450_E_grp-I       
IPR001128   Cyt_P450       
IPR017972   Cyt_P450_CS       
IPR013083   Znf_RING/FYVE/PHD       
IPR001841   Znf_RING       
IPR031824   RNF220_mid       
IPR040178   RNF220_RING       

SUPFAM

SSF48264   SSF48264       

Gene 3D

1.10.630.10     3.30.40.10    

CDD

cd16563  RING-HC_RNF220

ProteinModelPortal

H9J0K0   A0A2H1VDJ8   A0A212FEH3   A0A194R3Y8   A0A194PNR1   A0A0L7LF39   + More
A0A0L7KSF3   A0A2A4JRH4   A0A2A3EBV4   A0A087ZTQ6   A0A0L7RBK6   K7IPW7   A0A1B0DQG4   A0A0M8ZTI9   E0VBM5   A0A182UNK7   A0A182HGR8   A0A182JX26   A0A182KMA2   A7UVJ6   W5JDL5   A0A182TGL6   A0A182VQS9   A0A182XVA0   A0A182F6V7   A0A1B0CAC9   W8BAZ6   A0A182RP05   A0A182MTY9   A0A182X2P8   D6W7B0   A0A182N503   A0A182GQN1   A0A0J7NKS2   A0A336MLQ2   A0A336LD69   A0A0C9RHE3   B0W961   A0A1I8N3B3   A0A0K8W735   A0A1I8P0G1   A0A1I8P0A2   A0A1B0FRI8   A0A182IPU2   A0A154PNL8   A0A3L8DGL5   A0A2S2QGV8   A0A1D2MQR4   A0A182P5M9   B4JY03   A0A2S2R6K5   A0A0L0BL37   A0A084VRN6   A0A026WCR2   A0A1A9V4Y0   B4LVX9   E9IGR1   A0A1S4FYN1   A0A2S2P3P2   E2AXJ6   E2C5I1   A0A1A9X419   T1JBE5   A0A1J1J836   Q16JW0   A0A0Q9XEW3   B4K9I3   A0A1A9XT99   A0A1B0BEZ8   A0A3B0JET9   A0A226E6K3   A0A0R1E666   A0A0B4KI64   B4PMJ5   A0A0R3NK67   Q29CA4   B4GNE2   A0A1S5QNT4   A0A067RDH5   B3MT97   A0A2S2NWQ7   A0A1A9ZZN3   B4NGX9   A0A1W4W3S6   A0A1W4VQS7   A0A195C706   A0A151X4Q3   U4UVK4   N6T8W7   A0A0M4EGR7   A0A195D7Y1   A0A158NDV9   F4W7W0   A0A195BQQ4   A0A195ES98   T1I9E8   A0A0P5GI85   A0A0N8DCT7   E9FSA0  

PDB

4B6Z     E-value=3.9319e-05,     Score=107

KEGG

101739795    K23439 cytosolic carboxypeptidase protein 6 [EC:3.4.17.-] | (RefSeq) cytosolic carboxypeptidase 6

GO

GO:0008270   GO:0004181   GO:0004180   GO:0005506   GO:0016705   GO:0020037   GO:0004842  

Length:

165

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01508

Exp number, first 60 AAs:

0.00263

Total prob of N-in:

0.01342

outside

1  -  165

 

 

Pi

126.8287

Theta

158.671012

Tajima's D

-0.631031

CLR

1.433112

CSRT

0.209439528023599

Interpretation

Uncertain