Gene

KWMTBOMO02208

Pre Gene Modal

BGIBMGA003037

Annotation

PREDICTED:_cytosolic_carboxypeptidase_6_[Bombyx_mori]

Location

Bomo_Chr4(+):13931562-13937954      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.679

CDS

ATGTCCGATAGTGAAGAAAGCGACGGAGAGGGTGGTCTCGGTAATTTGAATCGCTTGATCGTGAGGCCTCCGGGGCACAGTGGGAAGGCCAAGCGAGGACAATTGTGCTTCGACGCAGCTTTTGAATGCGGGAACCTGGGACGCGCTGACCACATTACAGAACTGGAATATGACTTATTCATTAGGCCTGACACTTGTAGGCCTAGATCCCGGTTTTGGTTTAATTTTACCGTCGAGAATGTTAAGCAGGACCAAAGGGTGATTTTCAATTTAGTGAATATGGGAAAAGAATTAACCTTGTTTAACGGAGACATGACTCCCCTTGTGCGATCTACGTCACGTCCTAAATGGCAGAGAATACCGAGACGATTAATCTTCTATCATAGATCAATGGCTCACAGGGGACGTAAGATATTAAGCATAGCGTTTGCATTTGATAAAGAAGAAGACATATACCAATTCACTGCCGCCGCGCCGTACTCATACTCGCGGCTCCAAAAACACTTGACTACATGGGAAAAAAAAGCTCAGGATTTCGCTACGAGAGAAGCTATTGCTCAAACTACGCAAAAGCGACGAATCGATCTGATAACTATCGGCGATTTTAATTTCAAGCACGAAAATCAAATGAGTGAAGAACAACAAAAGGGTAAAATCGACCAGAAAAAGAAAGTTGTTCTGATCATTGCTCGAGCTCATGGCGGAGAGCCTCCAGCATCTTTCATATGCCAAGGCATAACAATTTTTGTTTAA

Protein

MSDSEESDGEGGLGNLNRLIVRPPGHSGKAKRGQLCFDAAFECGNLGRADHITELEYDLFIRPDTCRPRSRFWFNFTVENVKQDQRVIFNLVNMGKELTLFNGDMTPLVRSTSRPKWQRIPRRLIFYHRSMAHRGRKILSIAFAFDKEEDIYQFTAAAPYSYSRLQKHLTTWEKKAQDFATREAIAQTTQKRRIDLITIGDFNFKHENQMSEEQQKGKIDQKKKVVLIIARAHGGEPPASFICQGITIFV

Uniprot

H9J0K0   A0A2A4JRH4   A0A2H1VDJ8   A0A194R3Y8   A0A212FEH3   A0A194PNR1   + More
U4UVK4   N6T8W7   D6W7B0   A0A1Y1KS82   E0VBM5   A0A067RDH5   A0A2A3EBV4   A0A1A9ZZN3   A0A1B0FRI8   A0A1A9XT99   A0A1B0BEZ8   A0A151X4Q3   A0A0L0BL37   T1I9E8   A0A1A9X419   A0A1A9V4Y0   A0A195D7Y1   Q16JW0   A0A182QSU4   A0A084VRN6   A7UVJ6   A0A182TGL6   A0A182KMA2   A0A182GQN1   B0W961   A0A087ZTQ6   A0A336MLQ2   A0A336LD69   A0A182MTY9   A0A1S3JGN5   A0A158NDV9   A0A3M7P427   A0A2C9K9Z2   K1QF10   A0A210PVY6   A0A1S3JFE1   B4HZT5   K7IPW7   F4W7W0   A0A182XVA0   B3P563   B4R281   A0A0K8W735   B4NGX9   A0A1I8N3B3   A0A0Q9XEW3   A0A154PNL8   A0A1S5QNT4   B4K9I3   A0A1I8P0A2   A0A026WCR2   A0A0L7RBK6   A0A1I8P0G1   A0A0M4EGR7   E2AXJ6   B3MT97   B4LVX9   A0A0M8ZTI9   B4JY03   A0A3L8DGL5   X1WIJ0   A0A1D2MQR4   A0A3P9J6X0   V4AB37   A0A3P8WXD9   A0A1W4W3S6   A0A0P4YE97   A0A0N7ZNN2   A0A1W4VQS7   A0A0J7NKS2   A0A3P8X378   A0A0B6ZUD3   I3J259   A0A2S2QGV8   A0A3B4E411   A0A0R1E666   A0A3B0JET9   A0A2T7NPW1   B4PMJ5   A0A195ES98   A0A0B4KI64   Q8IMH9   A0A1I8G343   A0A0R3NK67   B4GNE2   Q29CA4   A0A3P9KY38   A0A3P8X159   A0A2S2R6K5   A0A182SU20   A0A2D0R052   A0A3P9KYB3   A0A3P9J6J9   B4DJT2  

Pubmed

19121390    26354079    22118469    23537049    18362917    19820115    + More
28004739    20566863    24845553    26108605    17510324    24438588    12364791    14747013    17210077    20966253    26483478    21347285    30375419    15562597    22992520    28812685    17994087    20075255    21719571    25244985    25315136    24508170    20798317    30249741    27289101    17554307    23254933    24487278    25186727    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26392545    15632085    23185243   

EMBL

BABH01010312    NWSH01000819    PCG74063.1    ODYU01001971    SOQ38905.1    KQ460779    + More
KPJ12239.1    AGBW02008931    OWR52149.1    KQ459598    KPI94623.1    KB632384    ERL94281.1    APGK01047133    KB741077    ENN74148.1    KQ971307    EFA11053.2    GEZM01078971    GEZM01078970    JAV62555.1    DS235033    EEB10781.1    KK852708    KDR17999.1    KZ288291    PBC29217.1    CCAG010010739    CCAG010010740    JXJN01013194    KQ982548    KYQ55269.1    JRES01001702    KNC20781.1    ACPB03002805    KQ981153    KYN08962.1    CH477989    EAT34582.1    AXCN02000181    ATLV01015761    KE525036    KFB40630.1    AAAB01008987    EDO63226.2    JXUM01080903    KQ563215    KXJ74270.1    DS231862    EDS39758.1    UFQT01001311    SSX29959.1    UFQS01002871    UFQT01002871    SSX14811.1    SSX34201.1    AXCM01001504    ADTU01013038    ADTU01013039    REGN01013560    RMZ93773.1    JH817025    EKC27440.1    NEDP02005458    OWF40625.1    CH480819    EDW53542.1    GL887888    EGI69630.1    CH954182    EDV53046.1    CM000364    EDX15037.1    GDHF01005306    JAI47008.1    CH964272    EDW84476.1    CH933806    KRG02248.1    KQ434977    KZC12820.1    KR068532    AMO02549.1    EDW16643.1    KK107274    EZA53723.1    KQ414617    KOC68195.1    CP012526    ALC47616.1    GL443590    EFN61834.1    CH902623    EDV30487.2    CH940650    EDW67584.1    KQ435851    KOX70840.1    CH916377    EDV90565.1    QOIP01000008    RLU19590.1    ABLF02038218    ABLF02038226    ABLF02038232    LJIJ01000711    ODM95105.1    KB200521    ESP01214.1    GDIP01228680    JAI94721.1    GDIP01227681    JAI95720.1    LBMM01003849    KMQ93055.1    HACG01024505    CEK71370.1    AERX01004205    AERX01004206    AERX01004207    AERX01004208    AERX01004209    AERX01004210    AERX01004211    AERX01004212    AERX01004213    AERX01004214    GGMS01007774    MBY76977.1    CM000160    KRK04685.1    OUUW01000005    SPP80894.1    PZQS01000010    PVD23210.1    EDW99129.1    KQ981993    KYN30777.1    AE014297    AGB96497.1    AAN14249.1    CM000070    KRS99522.1    KRS99523.1    CH479186    EDW39268.1    EAL26742.2    GGMS01016463    MBY85666.1    AK296221    BAG58944.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000007151    UP000053268    UP000030742    + More
UP000019118    UP000007266    UP000009046    UP000027135    UP000242457    UP000092445    UP000092444    UP000092443    UP000092460    UP000075809    UP000037069    UP000015103    UP000091820    UP000078200    UP000078492    UP000008820    UP000075886    UP000030765    UP000007062    UP000075902    UP000075882    UP000069940    UP000249989    UP000002320    UP000005203    UP000075883    UP000085678    UP000005205    UP000276133    UP000076420    UP000005408    UP000242188    UP000001292    UP000002358    UP000007755    UP000076408    UP000008711    UP000000304    UP000007798    UP000095301    UP000009192    UP000076502    UP000095300    UP000053097    UP000053825    UP000092553    UP000000311    UP000007801    UP000008792    UP000053105    UP000001070    UP000279307    UP000007819    UP000094527    UP000265200    UP000030746    UP000265120    UP000192221    UP000036403    UP000005207    UP000261440    UP000002282    UP000268350    UP000245119    UP000078541    UP000000803    UP000095280    UP000001819    UP000008744    UP000265180    UP000075901    UP000221080   

PRIDE

H9J0K0    Q8IMH9    B4DJT2   

Pfam

PF00246   Peptidase_M14        + More
PF18027   Pepdidase_M14_N
PF15926   RNF220

Interpro

IPR040626   Pepdidase_M14_N        + More
IPR000834   Peptidase_M14       
IPR013083   Znf_RING/FYVE/PHD       
IPR001841   Znf_RING       
IPR031824   RNF220_mid       
IPR040178   RNF220_RING       

Gene 3D

3.30.40.10    

CDD

cd16563  RING-HC_RNF220

ProteinModelPortal

H9J0K0   A0A2A4JRH4   A0A2H1VDJ8   A0A194R3Y8   A0A212FEH3   A0A194PNR1   + More
U4UVK4   N6T8W7   D6W7B0   A0A1Y1KS82   E0VBM5   A0A067RDH5   A0A2A3EBV4   A0A1A9ZZN3   A0A1B0FRI8   A0A1A9XT99   A0A1B0BEZ8   A0A151X4Q3   A0A0L0BL37   T1I9E8   A0A1A9X419   A0A1A9V4Y0   A0A195D7Y1   Q16JW0   A0A182QSU4   A0A084VRN6   A7UVJ6   A0A182TGL6   A0A182KMA2   A0A182GQN1   B0W961   A0A087ZTQ6   A0A336MLQ2   A0A336LD69   A0A182MTY9   A0A1S3JGN5   A0A158NDV9   A0A3M7P427   A0A2C9K9Z2   K1QF10   A0A210PVY6   A0A1S3JFE1   B4HZT5   K7IPW7   F4W7W0   A0A182XVA0   B3P563   B4R281   A0A0K8W735   B4NGX9   A0A1I8N3B3   A0A0Q9XEW3   A0A154PNL8   A0A1S5QNT4   B4K9I3   A0A1I8P0A2   A0A026WCR2   A0A0L7RBK6   A0A1I8P0G1   A0A0M4EGR7   E2AXJ6   B3MT97   B4LVX9   A0A0M8ZTI9   B4JY03   A0A3L8DGL5   X1WIJ0   A0A1D2MQR4   A0A3P9J6X0   V4AB37   A0A3P8WXD9   A0A1W4W3S6   A0A0P4YE97   A0A0N7ZNN2   A0A1W4VQS7   A0A0J7NKS2   A0A3P8X378   A0A0B6ZUD3   I3J259   A0A2S2QGV8   A0A3B4E411   A0A0R1E666   A0A3B0JET9   A0A2T7NPW1   B4PMJ5   A0A195ES98   A0A0B4KI64   Q8IMH9   A0A1I8G343   A0A0R3NK67   B4GNE2   Q29CA4   A0A3P9KY38   A0A3P8X159   A0A2S2R6K5   A0A182SU20   A0A2D0R052   A0A3P9KYB3   A0A3P9J6J9   B4DJT2  

PDB

4A39     E-value=0.000579632,     Score=100

KEGG

101739795    K23439 cytosolic carboxypeptidase protein 6 [EC:3.4.17.-] | (RefSeq) cytosolic carboxypeptidase 6

GO

GO:0008270   GO:0004181   GO:0004842   GO:0004180   GO:0016021  

Length:

250

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01344

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02491

outside

1  -  250

 

 

Pi

193.699981

Theta

180.653584

Tajima's D

0.543392

CLR

0.592599

CSRT

0.532873356332183

Interpretation

Uncertain