Gene

KWMTBOMO02202

Pre Gene Modal

BGIBMGA003124

Annotation

PREDICTED:_cell_division_cycle_protein_23_homolog_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr4(-):13838386-13844586      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.38 Nuclear   Reliability : 1.345

CDS

ATGCAACCTTTATCAATGCATCCTAAGTCAGACATTCAGATTGATCTGACCCAGGTTAGAATTGATATTCTTCAAGGTATCCGTGAATGTAACAGTCGTGGTCTTGTACAAACTACGAAGTGGCTTGCAGAATTGAATTATGCTTTAAGAGACCACAAGATAACTTCCGAGGAACCTTCAGAATCTCTGAACGAGGACATAACGCCGGAGGAAAAGGATGCCTACACATTAGCAAAATGCTACTTCGACTGTCAAGAATACGATAGAGCTGCCCATTTTTTAGAGAACTGCACGAGTTCGAAATGCGTTTTTCTTCACAAATATTCTTTGTATATGTCTAGTGAGAAAAAGCGTTTAGATAATGCCACAGACCTGGGTACAGAAAATAGTGAATCAAATCAAGTTCTTTTGGACTTATTGTCTTTCTTTAAAACCAACTCCAATAACCTCGATGGTTACTTGTTGTATCTAGAAGGTGTTGTACTTAAAAAACTAGATCTAAGAAGTCAAGCTGTTACAGTACTGCAAGCTTCTGTTCAAGCAGCACCTACATTATGGGCAGCCTGGATAGAGTTGGCAGGCTTGGCCAATGAATATGAGGCACTAGATTCATTACAACTACCGAAACATTGGATGATGTACTTTTTTGCAGCTCATGCATTTGTGGAACTGAAGCTATCAGAACAAGCTTTGGAAGCTTACATGGTGTTGGCTGCAGCAGGATTTGAGAAGAGTACATATATAACAGCACAAATGGCTATAGCGCATCATGACAGAAGAGATGTGGATTCTTCACTTGCTTTGTTCAGGTTATTATACGAGAATGATCCATATCGACTAGACAACTGGGATGTTTACTCTCATCTGTTATATTTGAAGGAAAAACGAATGGAACTTGCAAATTTGGCACAAAGGGCAGTCTCCATTGACAAATACAGAGTAGAAACGTGTTGTGTTATAGGTAATTATTACAGCTTAAGATGTGAGCACCAAAAAGCTGTGATATACTTCCAAAGAGCTTTATCTCTAGACCCTCAGTACTTGTCTGCGTGGATCCTTATGGGGCATGAATTCATTGAACTTCAAAACTCCAATGCTGCAATACAATGTTATAGGCAAGCCATTGATGTAAACCGAAATGATTATAGAGCATGGAACGGTCTAGGACAAGCATATGAAATACTAGGGTTGAATAGTTACTGTATTTACTATTACTCTAGAGCCGCTCAACTGAAACCTGATGATTCAAGGATGTTGGTGTCTCTCGGTGAAGCATATGAGAAAATGGAAAAAATACCTAATGCATTGAAATGTTATTACAAAGCGCACAGTACAGGCGATATTGAAGGCATGGCTTTATTCAAATTAGCCAAGTTGTATGAAAGGTCGAACATGCCAAACAGTGCTGCGGCTGCGTACACAGCGGCGTGCCAGGATCCCGCGAACTCCGGCAGCAAGGAACTGCCGGCGGCGCAACGGTACCTAGCGCAGTATTACCTTAGGTTCTCACTGCTTGATCACGCGGCACATTACGCCTATAAATGTTTGGAGCATGAGAGTACTAAAGAAGCAGGAAAGAACATATTAAAAATGGTTTCCGAAAAACGGTTAGCAGCGTCTTCGTCCCAGTCGTCAGATTTACCTGAAGACTTACCAGAGGCAATCAAGAATGTGTCAACGGTGTCCATAACACAGGACATTCCCAAAACACCGCTACCTAGTCCCAATGTTACTCCAGAGAACTTCTCGACCCCGGTTTTCACGCGAAAAAACAAGCTTTGA

Protein

MQPLSMHPKSDIQIDLTQVRIDILQGIRECNSRGLVQTTKWLAELNYALRDHKITSEEPSESLNEDITPEEKDAYTLAKCYFDCQEYDRAAHFLENCTSSKCVFLHKYSLYMSSEKKRLDNATDLGTENSESNQVLLDLLSFFKTNSNNLDGYLLYLEGVVLKKLDLRSQAVTVLQASVQAAPTLWAAWIELAGLANEYEALDSLQLPKHWMMYFFAAHAFVELKLSEQALEAYMVLAAAGFEKSTYITAQMAIAHHDRRDVDSSLALFRLLYENDPYRLDNWDVYSHLLYLKEKRMELANLAQRAVSIDKYRVETCCVIGNYYSLRCEHQKAVIYFQRALSLDPQYLSAWILMGHEFIELQNSNAAIQCYRQAIDVNRNDYRAWNGLGQAYEILGLNSYCIYYYSRAAQLKPDDSRMLVSLGEAYEKMEKIPNALKCYYKAHSTGDIEGMALFKLAKLYERSNMPNSAAAAYTAACQDPANSGSKELPAAQRYLAQYYLRFSLLDHAAHYAYKCLEHESTKEAGKNILKMVSEKRLAASSSQSSDLPEDLPEAIKNVSTVSITQDIPKTPLPSPNVTPENFSTPVFTRKNKL

Uniprot

H9J0T7   A0A2A4JB81   A0A2H1VJB3   A0A212FFD5   A0A194PU28   A0A194R8Q7   + More
A0A0L7LAE8   S4PM00   A0A2J7QCT7   A0A1W4WVK0   A0A1Y1LWT3   A0A067RJF3   E2C5D1   A0A3L8E1C3   A0A232F7T2   E2A0K5   A0A158NDN8   K7IP99   A0A0C9R501   A0A195CL96   A0A0J7KCT9   A0A195BQT6   A0A151XEJ9   A0A195F3U6   A0A2R5LLS6   A0A2A3E6H7   A0A088A2M6   F4WZ39   A0A0L7RBB5   A0A195D9X9   A0A293M7K3   A0A182GYE2   D6WM66   Q17FZ7   A0A1I8P8G1   A0A0M9A157   B0WWM2   A0A154PGG4   W5JD92   A0A131XZH7   A0A1B6J7D1   A0A1B6F0D6   A0A0A9XSR5   B4MZA8   A0A0V0GAC5   T1JH63   A0A1I8MBF9   A0A224XMW7   A0A2G8L161   A0A069DVK1   B7QK51   A0A1Q3F4J0   A0A0L0CAB3   A0A1W4V1F1   A0A182J1T8   A0A182F2I1   A0A1S3IXC3   B3MMU3   A0A084WC76   B4Q3D6   B4LSY4   B4KEP8   B4IFC4   Q9I7L8   B8A417   A0A0M4EP48   A0A0A1WEV5   B3NM12   A0A0P4WCT9   B4GSV7   A0A1A9XZI4   A0A1B0B909   Q29KS5   B4JCD1   A0A034WGC2   A0A1A9UMH9   A0A1B0FIR9   A0A182MFV3   A0A2P6KFY2   W8B7K7   A0A182X797   A0A182TZI3   A0A182KTM8   Q7Q1A6   A0A182PJI1   A0A3B0KDR3   B4PBL0   A0A210PPG0   C3ZLP9   A0A182HRK3   A0A182K3S4   A0A087U6G2   A0A0K8WDJ4   A0A182RAS1   A0A3B4GFC7   A0A3P9QJ58   A0A182YDN0   A0A182NUJ0   H3BCT6  

Pubmed

19121390    22118469    26354079    26227816    23622113    28004739    + More
24845553    20798317    30249741    28648823    21347285    20075255    21719571    26483478    18362917    19820115    17510324    20920257    23761445    25401762    26823975    17994087    25315136    29023486    26334808    26108605    24438588    22936249    18057021    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25830018    15632085    25348373    24495485    20966253    12364791    17550304    28812685    18563158    25244985    9215903   

EMBL

BABH01010322    NWSH01002294    PCG68653.1    ODYU01002883    SOQ40920.1    AGBW02008830    + More
OWR52433.1    KQ459598    KPI94640.1    KQ460779    KPJ12256.1    JTDY01001995    KOB72374.1    GAIX01003790    JAA88770.1    NEVH01015876    PNF26398.1    GEZM01045001    JAV77989.1    KK852595    KDR20623.1    GL452770    EFN76864.1    QOIP01000002    RLU25828.1    NNAY01000743    OXU26725.1    GL435626    EFN72908.1    ADTU01012729    GBYB01011389    JAG81156.1    KQ977600    KYN01496.1    LBMM01009562    KMQ88026.1    KQ976424    KYM88324.1    KQ982254    KYQ58793.1    KQ981820    KYN35133.1    GGLE01006269    MBY10395.1    KZ288367    PBC26826.1    GL888465    EGI60542.1    KQ414617    KOC68110.1    KQ981082    KYN09725.1    GFWV01011352    MAA36081.1    JXUM01097358    KQ564337    KXJ72407.1    KQ971343    EFA04231.1    CH477267    EAT45473.1    KQ435793    KOX74256.1    DS232149    EDS36114.1    KQ434899    KZC10933.1    ADMH02001853    ETN60860.1    GEFM01004138    JAP71658.1    GECU01012623    JAS95083.1    GECZ01026119    JAS43650.1    GBHO01020595    GBRD01011484    GDHC01016702    JAG23009.1    JAG54340.1    JAQ01927.1    CH963913    EDW77381.2    GECL01001115    JAP05009.1    JH432222    GFTR01007087    JAW09339.1    MRZV01000267    PIK54004.1    GBGD01001058    JAC87831.1    ABJB010360414    DS957045    EEC19223.1    GFDL01012571    JAV22474.1    JRES01000682    KNC29175.1    CH902620    EDV30968.1    ATLV01022579    KE525333    KFB47820.1    CM000361    CM002910    EDX05617.1    KMY91166.1    CH940649    EDW64895.1    KRF81928.1    KRF81929.1    CH933807    EDW12948.1    CH480833    EDW46346.1    AE014134    BT010078    AAG22447.2    AAQ22547.1    AGB93164.1    BT056309    ACL68756.1    CP012523    ALC38562.1    GBXI01016870    JAC97421.1    CH954179    EDV54548.1    GDRN01099305    JAI58793.1    CH479189    EDW25466.1    JXJN01010202    CH379061    EAL33100.1    CH916368    EDW04164.1    GAKP01006134    JAC52818.1    CCAG010016358    AXCM01000820    MWRG01013076    PRD25217.1    GAMC01011978    JAB94577.1    AAAB01008980    EAA14469.3    OUUW01000006    SPP81798.1    CM000158    EDW90524.1    NEDP02005569    OWF38363.1    GG666642    EEN46522.1    APCN01001715    KK118433    KFM72951.1    GDHF01003137    JAI49177.1    AFYH01039562   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000053240    UP000037510    + More
UP000235965    UP000192223    UP000027135    UP000008237    UP000279307    UP000215335    UP000000311    UP000005205    UP000002358    UP000078542    UP000036403    UP000078540    UP000075809    UP000078541    UP000242457    UP000005203    UP000007755    UP000053825    UP000078492    UP000069940    UP000249989    UP000007266    UP000008820    UP000095300    UP000053105    UP000002320    UP000076502    UP000000673    UP000007798    UP000095301    UP000230750    UP000001555    UP000037069    UP000192221    UP000075880    UP000069272    UP000085678    UP000007801    UP000030765    UP000000304    UP000008792    UP000009192    UP000001292    UP000000803    UP000092553    UP000008711    UP000008744    UP000092443    UP000092460    UP000001819    UP000001070    UP000078200    UP000092444    UP000075883    UP000076407    UP000075902    UP000075882    UP000007062    UP000075885    UP000268350    UP000002282    UP000242188    UP000001554    UP000075840    UP000075881    UP000054359    UP000075900    UP000261460    UP000242638    UP000076408    UP000075884    UP000008672   

PRIDE

H9J0T7    B7QK51   

Pfam

PF13181   TPR_8        + More
PF04049   ANAPC8
PF06730   FAM92
PF13174   TPR_6
PF00515   TPR_1
PF13176   TPR_7

Interpro

IPR013026   TPR-contain_dom        + More
IPR007192   APC8       
IPR019734   TPR_repeat       
IPR011990   TPR-like_helical_dom_sf       
IPR009602   FAM92       
IPR001440   TPR_1       
IPR027267   AH/BAR_dom_sf       

SUPFAM

SSF48452   SSF48452        + More
SSF103657   SSF103657       

Gene 3D

1.25.40.10     1.20.1270.60    

ProteinModelPortal

H9J0T7   A0A2A4JB81   A0A2H1VJB3   A0A212FFD5   A0A194PU28   A0A194R8Q7   + More
A0A0L7LAE8   S4PM00   A0A2J7QCT7   A0A1W4WVK0   A0A1Y1LWT3   A0A067RJF3   E2C5D1   A0A3L8E1C3   A0A232F7T2   E2A0K5   A0A158NDN8   K7IP99   A0A0C9R501   A0A195CL96   A0A0J7KCT9   A0A195BQT6   A0A151XEJ9   A0A195F3U6   A0A2R5LLS6   A0A2A3E6H7   A0A088A2M6   F4WZ39   A0A0L7RBB5   A0A195D9X9   A0A293M7K3   A0A182GYE2   D6WM66   Q17FZ7   A0A1I8P8G1   A0A0M9A157   B0WWM2   A0A154PGG4   W5JD92   A0A131XZH7   A0A1B6J7D1   A0A1B6F0D6   A0A0A9XSR5   B4MZA8   A0A0V0GAC5   T1JH63   A0A1I8MBF9   A0A224XMW7   A0A2G8L161   A0A069DVK1   B7QK51   A0A1Q3F4J0   A0A0L0CAB3   A0A1W4V1F1   A0A182J1T8   A0A182F2I1   A0A1S3IXC3   B3MMU3   A0A084WC76   B4Q3D6   B4LSY4   B4KEP8   B4IFC4   Q9I7L8   B8A417   A0A0M4EP48   A0A0A1WEV5   B3NM12   A0A0P4WCT9   B4GSV7   A0A1A9XZI4   A0A1B0B909   Q29KS5   B4JCD1   A0A034WGC2   A0A1A9UMH9   A0A1B0FIR9   A0A182MFV3   A0A2P6KFY2   W8B7K7   A0A182X797   A0A182TZI3   A0A182KTM8   Q7Q1A6   A0A182PJI1   A0A3B0KDR3   B4PBL0   A0A210PPG0   C3ZLP9   A0A182HRK3   A0A182K3S4   A0A087U6G2   A0A0K8WDJ4   A0A182RAS1   A0A3B4GFC7   A0A3P9QJ58   A0A182YDN0   A0A182NUJ0   H3BCT6  

PDB

5LCW     E-value=1.27739e-134,     Score=1231

KEGG

101741642    K03355 anaphase-promoting complex subunit 8 | (RefSeq) cell division cycle protein 23 homolog

PATHWAY

04120    Ubiquitin mediated proteolysis - Bombyx mori (domestic silkworm)

GO

GO:0030071   GO:0005680   GO:0051301   GO:0003677   GO:0045842   GO:0061630   GO:0007113   GO:0005524   GO:0005515   GO:0016020   GO:0005839   GO:0051603   GO:0008483   GO:0006418   GO:0016507   GO:0048384  

Length:

593

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01719

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00076

outside

1  -  593

 

 

Pi

270.430983

Theta

197.007262

Tajima's D

1.351365

CLR

0

CSRT

0.746712664366782

Interpretation

Uncertain