Gene

KWMTBOMO02196  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003129

Annotation

CRAL-TRIO_domain-containing_protein?_partial_[Manduca_sexta]

Location

Bomo_Chr4(-):13749704-13771426      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.897

CDS

ATGAGTTCAAGCGAGTTCAGATTAGAGCGCAGCGTGGAGCTCTCGCCAGACACCAAAGAGTTGGCGGAAAAGGAGTTGAGAGAGACCCCGGAAAGAGTACGCGAAGCCTTGGAAAGGCTAAAGGAACTTCTTAAGGAAAACAAAGATTTGTATTTTCCAGACGACGATGAGATACTCACGATTTTCCTGAGACCATGCAAATGGTATCCGGAGAGCGCTCTTGCATTGATGAGACGCGTGGCAGAATTTAAACGCGATAATGCACACTTGTTAGATGGACTACTTCCTGAACATGAGAAGGACGCCTTTCTAGACCATAAAGTGGTGAATGTGATGAAAGGTCGCGACAATAAGGGCAGAAGAGTTTTAATCGTTAGTGTTGGAGGTTCATGGGACCCGAAGAAAGTAAACGCAGATCAGCTGTTCAGACTGTTCTATTTGATCCACTTGGCCGCCATACTGGAGCCCGAGTCGCAGGTCAAAGGCACCGTTGTCATCATGGACTTCTACAACATGGGATGGACACAGACAATGGGTCTAACGCCTGCGTTTTCCAAGAGGCTATTAACGTTCATCCAAGACGCCATGCCTCTTCGCTTGAAGGAGGTGCATTTCGTGAAGCAGCCCATGATCTTCAACGTCGTATGGAACATGTTCAAGCCTTTCATCAGGGAGAAGCTTAAGAATAGGATTTTCTTCCACGGTTCCAAAATGTCTTCTCTCCATAAGTATATGGCGCCCAGTCACCTACCCTCGGATTATGGTGGTGAACTTCCGGCTATCGACTACTCCGGAGCCGACTGGTATCCGGTCATCAACGAAATTCTGCCTCATGTGCAGAATTGGAACAAGTACGGTTTCGTTAAAGACTCTTAG

Protein

MSSSEFRLERSVELSPDTKELAEKELRETPERVREALERLKELLKENKDLYFPDDDEILTIFLRPCKWYPESALALMRRVAEFKRDNAHLLDGLLPEHEKDAFLDHKVVNVMKGRDNKGRRVLIVSVGGSWDPKKVNADQLFRLFYLIHLAAILEPESQVKGTVVIMDFYNMGWTQTMGLTPAFSKRLLTFIQDAMPLRLKEVHFVKQPMIFNVVWNMFKPFIREKLKNRIFFHGSKMSSLHKYMAPSHLPSDYGGELPAIDYSGADWYPVINEILPHVQNWNKYGFVKDS

Uniprot

A0A0S2Z2T5   A0A2H1VJC1   A0A2A4J940   A0A1E1W099   A0A2H4RMU6   A0A2H4RMQ3   + More
H9J0U2   A0A194R8R3   A0A194PMI5   A0A212FBB1   A0A1W4XA27   A0A1Y1NAI9   K7J580   A0A0C9R812   R4WCP8   D6WLC8   A0A0T6AVR5   A0A026WU88   A0A232FJV0   A0A1B6CWD6   A0A1B6DTK8   A0A3L8DH27   A0A158NHE5   A0A2J7PEH1   T1DR84   A0A2M4BWU1   A0A2M4APF3   A0A2M4APB8   U5EFH4   A0A088A1P2   A0A2C9MDB1   A0A1B6J167   Q17LL2   W5JI19   A0A182NZ30   B0X3T6   A0A1Q3FZQ0   S4P4C6   Q5TVH6   F4WD83   Q95P61   E2B178   Q8T4S9   A0A182LWG3   Q8T4T2   Q8T4T0   Q9BJM8   A0A1Y9IVT2   Q8T4T1   A0A151XFE8   A0A154PSA8   A0A195E293   V9IED9   A0A1B0CK76   A0A195AZZ0   A0A182VM03   A0A182QCQ1   A0A1S4H0Z6   A0A2C9GQB1   A0A182L6P2   A0A1L8DZ28   A0A182G9U7   A0A195D4I0   A0A182G5R9   A0A0L7QVU9   Q17LL1   A0A1L8DYZ3   A0A182UR31   A0A182G9U8   Q7PFL1   A0A1S4H0Z1   A0A182G5R8   A0A182J4D7   A0A2C9GQB5   A0A182Q546   A0A1Y9IV35   A0A084VLZ1   E2C3S3   A0A0M9A037   U4UTN5   N6U714   A0A1J1HQ32   A0A182IV84   A0A182MT75   A0A1S3D0X5   A0A182RG68   A0A224XH85   A0A182NZ29   A0A1Y1MPC6   D3TLW9   A0A182T7N1   E0VDE3   A0A1A9ZVH2   A0A310SKM8   A0A0P4VJG7   R4G4H4   W5JLJ0   A0A182P2S8   A0A1B0AZA8   A0A1A9YQY8  

Pubmed

25684408    29136137    19121390    26354079    22118469    28004739    + More
20075255    23691247    18362917    19820115    24508170    28648823    30249741    21347285    17510324    20920257    23761445    23622113    12364791    14747013    17210077    21719571    14513362    20798317    20966253    26483478    24438588    23537049    20353571    20566863    27129103   

EMBL

KT943539    ALQ33297.1    ODYU01002883    SOQ40927.1    NWSH01002294    PCG68637.1    + More
GDQN01011114    GDQN01010692    JAT79940.1    JAT80362.1    MG434654    ATY51960.1    MG434612    ATY51918.1    BABH01010336    BABH01010337    KQ460779    KPJ12261.1    KQ459598    KPI94646.1    AGBW02009357    OWR51026.1    GEZM01007780    JAV94934.1    AAZX01008416    GBYB01002921    JAG72688.1    AK417043    BAN20258.1    KQ971343    EFA03468.1    LJIG01022701    KRT79169.1    KK107109    EZA59216.1    NNAY01000143    OXU30597.1    GEDC01019604    JAS17694.1    GEDC01008286    JAS29012.1    QOIP01000008    RLU19229.1    ADTU01015727    ADTU01015728    ADTU01015729    NEVH01026096    PNF14727.1    GAMD01000750    JAB00841.1    GGFJ01008260    MBW57401.1    GGFK01009291    MBW42612.1    GGFK01009292    MBW42613.1    GANO01003850    JAB56021.1    GECU01014781    JAS92925.1    CH477214    EAT47601.1    ADMH02001192    ETN63776.1    DS232322    EDS40013.1    GFDL01001994    JAV33051.1    GAIX01009107    JAA83453.1    AAAB01008835    EAL41409.3    GL888086    EGI67810.1    AF390101    AY064087    AY064090    AAK73352.1    AAL85588.1    AAL85591.1    EAT47600.1    EJY57370.1    GL444799    EFN60570.1    AY064091    AAL85592.1    AXCM01001490    AY064086    AAL85587.1    AY064089    AAL85590.1    AF329893    AAK17189.1    AY064088    AAL85589.1    KQ982194    KYQ59106.1    KQ435050    KZC14224.1    KQ979763    KYN19196.1    JR041453    AEY59450.1    AJWK01015878    AJWK01015879    KQ976694    KYM77612.1    AXCN02000846    APCN01004203    GFDF01002405    JAV11679.1    JXUM01049828    JXUM01049829    KQ561623    KXJ77970.1    KQ976870    KYN07793.1    JXUM01043933    JXUM01043934    KQ561381    KXJ78769.1    KQ414725    KOC62674.1    EAT47602.1    GFDF01002406    JAV11678.1    JXUM01049830    JXUM01049831    JXUM01049832    KXJ77971.1    EAA45271.4    JXUM01043930    JXUM01043931    JXUM01043932    KXJ78768.1    ATLV01014572    KE524975    KFB38985.1    GL452364    EFN77309.1    KQ435803    KOX73153.1    KB632364    ERL93556.1    APGK01037684    KB740948    ENN77440.1    CVRI01000017    CRK90149.1    GFTR01004570    JAW11856.1    GEZM01025275    JAV87529.1    CCAG010002025    EZ422421    ADD18697.1    DS235073    EEB11399.1    KQ760343    OAD60848.1    GDKW01001453    JAI55142.1    ACPB03010462    GAHY01001360    JAA76150.1    ETN63775.1    JXJN01006219   

Proteomes

UP000218220    UP000005204    UP000053240    UP000053268    UP000007151    UP000192223    + More
UP000002358    UP000007266    UP000053097    UP000215335    UP000279307    UP000005205    UP000235965    UP000005203    UP000008820    UP000000673    UP000075884    UP000002320    UP000007062    UP000007755    UP000000311    UP000075883    UP000075920    UP000075809    UP000076502    UP000078492    UP000092461    UP000078540    UP000075903    UP000075886    UP000075840    UP000075882    UP000069940    UP000249989    UP000078542    UP000053825    UP000075880    UP000030765    UP000008237    UP000053105    UP000030742    UP000019118    UP000183832    UP000079169    UP000075900    UP000092444    UP000075901    UP000009046    UP000092445    UP000015103    UP000075885    UP000092460    UP000092443   

PRIDE

H9J0U2   

Pfam

PF00650   CRAL_TRIO

Interpro

IPR036865   CRAL-TRIO_dom_sf        + More
IPR036273   CRAL/TRIO_N_dom_sf       
IPR001251   CRAL-TRIO_dom       
IPR011074   CRAL/TRIO_N_dom       

SUPFAM

SSF46938   SSF46938        + More
SSF52087   SSF52087       

Gene 3D

3.40.525.10    

CDD

cd00170  SEC14

ProteinModelPortal

A0A0S2Z2T5   A0A2H1VJC1   A0A2A4J940   A0A1E1W099   A0A2H4RMU6   A0A2H4RMQ3   + More
H9J0U2   A0A194R8R3   A0A194PMI5   A0A212FBB1   A0A1W4XA27   A0A1Y1NAI9   K7J580   A0A0C9R812   R4WCP8   D6WLC8   A0A0T6AVR5   A0A026WU88   A0A232FJV0   A0A1B6CWD6   A0A1B6DTK8   A0A3L8DH27   A0A158NHE5   A0A2J7PEH1   T1DR84   A0A2M4BWU1   A0A2M4APF3   A0A2M4APB8   U5EFH4   A0A088A1P2   A0A2C9MDB1   A0A1B6J167   Q17LL2   W5JI19   A0A182NZ30   B0X3T6   A0A1Q3FZQ0   S4P4C6   Q5TVH6   F4WD83   Q95P61   E2B178   Q8T4S9   A0A182LWG3   Q8T4T2   Q8T4T0   Q9BJM8   A0A1Y9IVT2   Q8T4T1   A0A151XFE8   A0A154PSA8   A0A195E293   V9IED9   A0A1B0CK76   A0A195AZZ0   A0A182VM03   A0A182QCQ1   A0A1S4H0Z6   A0A2C9GQB1   A0A182L6P2   A0A1L8DZ28   A0A182G9U7   A0A195D4I0   A0A182G5R9   A0A0L7QVU9   Q17LL1   A0A1L8DYZ3   A0A182UR31   A0A182G9U8   Q7PFL1   A0A1S4H0Z1   A0A182G5R8   A0A182J4D7   A0A2C9GQB5   A0A182Q546   A0A1Y9IV35   A0A084VLZ1   E2C3S3   A0A0M9A037   U4UTN5   N6U714   A0A1J1HQ32   A0A182IV84   A0A182MT75   A0A1S3D0X5   A0A182RG68   A0A224XH85   A0A182NZ29   A0A1Y1MPC6   D3TLW9   A0A182T7N1   E0VDE3   A0A1A9ZVH2   A0A310SKM8   A0A0P4VJG7   R4G4H4   W5JLJ0   A0A182P2S8   A0A1B0AZA8   A0A1A9YQY8  

PDB

3HY5     E-value=1.78522e-24,     Score=277

KEGG

101742363    no KO assigned | (RefSeq) clavesin-1

GO

GO:0005215   GO:0005622   GO:0006810   GO:0016020   GO:0005839   GO:0051603   GO:0008483   GO:0006418   GO:0016507   GO:0048384  

Length:

291

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02806

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02048

outside

1  -  291

 

 

Pi

273.767543

Theta

193.425706

Tajima's D

1.212611

CLR

0.255734

CSRT

0.718214089295535

Interpretation

Uncertain