Gene

KWMTBOMO02192

Pre Gene Modal

BGIBMGA003132

Annotation

CRAL-TRIO_domain-containing_protein?_partial_[Manduca_sexta]

Location

Bomo_Chr4(-):13633104-13661536      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 3.074

CDS

ATGCCGACTCCGGATTACAGCGTGGACTTGGACCTCGGCGAGCCCCCGCCAGAGATCCAAGACTACGCTCGTCAGCATTGCGGCGAGGACCCCAATACTCGACTTCAAGCCATCTACGAACTAAGGGACATGATTTATGAGCGCGGTGAATGTACCCCTCACAGGATGGATGATGAATTCCTGATTAGATTCCTTCGTGCTCGAAATTTCATACCACAAAAAGCTCATAGATTGCTCGTAAACTACTATCAGTTCAGAGCAGAGAATCCGGATTTGTTCGAGAACATTCATCCTATGGATCTTCACGCCATCGGGGACGCAGATATCATGACGGTACCACCGTACCGCGGACCCGATGGGCGCAGACTCATTATATATAAATTTGGTAATTGGGACCCAAAGACCATTTGCGTGGAAGAATTGTTCAAAGCAACAATCCTTAGCCTAGAACTGGGTATGATGGAGCCGCGTACTCAGATCCTGGGGGCAAGTGCTCTGGTCGACCTGGAGGATCTTGGCTCCCAGCATGTGTGGCAGTGTACGCCGTCTGTAGCAGCCAAATTACTCAAGATACTTGTGAATTGCTACCCAACGAAGATACACGCGATCCACATAATCAATCACTCCTGGATCTTCGACAAAGCTTACAGCGTTTTTAAGCCATTCTTGAACGACGTCATGAAATCGAGGATCTATTTCCACGGTAATGACGTCACATCGCTTCACAAGCACATCAGCCCGGACTATTTACCCGAAAGCTATGGCGGTGTCTGGCCGGATTACTCCTACACTATTTGGTTGGATTCTTTGCGTAAAAACGTGGTCGTCGCCAAGGAAATGATATCATGTGGTTACAAATTCCGTGAACATGAATTAAACCAAGACGTCCTTGAACATTTGACTAAGGAAGGCATTCAAATATCCTAA

Protein

MPTPDYSVDLDLGEPPPEIQDYARQHCGEDPNTRLQAIYELRDMIYERGECTPHRMDDEFLIRFLRARNFIPQKAHRLLVNYYQFRAENPDLFENIHPMDLHAIGDADIMTVPPYRGPDGRRLIIYKFGNWDPKTICVEELFKATILSLELGMMEPRTQILGASALVDLEDLGSQHVWQCTPSVAAKLLKILVNCYPTKIHAIHIINHSWIFDKAYSVFKPFLNDVMKSRIYFHGNDVTSLHKHISPDYLPESYGGVWPDYSYTIWLDSLRKNVVVAKEMISCGYKFREHELNQDVLEHLTKEGIQIS

Uniprot

H9J0U5   A0A0S2Z2X8   A0A2H4RMR4   S4PDY3   A0A2H4RMU9   A0A2A4J639   + More
A0A194PPJ0   A0A212FFX7   A0A0L7LMG0   A0A194R4U3   D6WK77   A0A2J7PEI5   A0A151XFF6   A0A0L7QVN0   A0A154PSY4   A0A195D4M7   A0A158NHN1   A0A2H1VTH5   A0A088A1P4   K7J584   A0A195AZZ6   A0A0M8ZXJ1   A0A2P8Y1N2   A0A088AQZ8   A0A026WVT7   A0A195EF31   A0A3L8DGB1   E2B175   A0A195FWL3   A0A1Y1MAD0   E2C3S6   F4WD80   A0A0C9RS57   A0A1Y1M6Q3   E9J2R5   J3JWX5   A0A067R7A4   A0A1Y1KBD3   A0A1Y1KBD8   A0A310SSY3   A0A069DR99   U5EUI3   B0WIP9   A0A1S4JIR2   A0A1Q3FJS7   A0A1L8DYZ0   N6THZ4   R4G2V6   A0A1B6CWG4   A0A224XT63   A0A1L8DYX8   U4UM51   A0A023F8M2   W5JFN1   A0A336N2P7   A0A171B1L9   A0A2M3ZAW7   A0A1B6EH81   T1DG07   A0A023ENW0   A0A2M4BVI7   Q16T91   A0A2M4BVL7   A0A182USL8   A0A182M7C8   A0A2C9H8Q1   A0A182U9P9   A0A2M4ADQ0   A0A2M4ADP7   A0A182KCU4   A0A1S4H0R7   A0A182GRY0   A0A182JEP7   A0A1B6IJ80   A0A1J1HZC9   A0A182SLW3   A0A084VM70   A0A2S2QBB3   A0A034WVU7   A0A182QDV4   A0A3B0KI89   A0A3B0JTP5   A0A3B0JTL6   A0A2H8TKU5   J9JPQ9   A0A0R3NV55   B4N164   Q29K54   A0A0K8VQT4   A0A0R3P0C1   A0A2S2PKI9   B4GWX2   A0A1W4V301   A0A1W4VFB1   A0A0A9VYR6   A0A182P9H0   A0A0K8SWM7   B3NM52   B4Q9Y4   Q9VIW1  

Pubmed

19121390    25684408    29136137    23622113    26354079    22118469    + More
26227816    18362917    19820115    21347285    20075255    29403074    24508170    30249741    20798317    28004739    21719571    21282665    22516182    24845553    26334808    23537049    25474469    20920257    23761445    24945155    17510324    12364791    26483478    24438588    25348373    15632085    17994087    25401762    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356   

EMBL

BABH01010352    BABH01010353    KT943556    ALQ33314.1    MG434618    ATY51924.1    + More
GAIX01004762    JAA87798.1    MG434649    ATY51955.1    NWSH01003077    PCG66994.1    KQ459598    KPI94649.1    AGBW02008751    OWR52636.1    JTDY01000576    KOB76610.1    KQ460779    KPJ12265.1    KQ971342    EFA03949.1    NEVH01026096    PNF14739.1    KQ982194    KYQ59109.1    KQ414725    KOC62670.1    KQ435050    KZC14220.1    KQ976870    KYN07796.1    ADTU01015717    ODYU01004059    SOQ43544.1    AAZX01000350    KQ976694    KYM77615.1    KQ435803    KOX73150.1    PYGN01001044    PSN38167.1    KK107109    EZA59219.1    KQ979039    KYN23459.1    QOIP01000008    RLU19232.1    GL444799    EFN60567.1    KQ981208    KYN44838.1    GEZM01038761    JAV81520.1    GL452364    EFN77312.1    GL888086    EGI67807.1    GBYB01011455    JAG81222.1    GEZM01038762    JAV81519.1    GL767998    EFZ12889.1    BT127743    AEE62705.1    KK852692    KDR18336.1    GEZM01087248    JAV58822.1    GEZM01087247    JAV58823.1    KQ760343    OAD60852.1    GBGD01002291    JAC86598.1    GANO01002311    JAB57560.1    DS231951    EDS28626.1    GFDL01007164    JAV27881.1    GFDF01002447    JAV11637.1    APGK01037684    KB740948    ENN77438.1    ACPB03010458    GAHY01002256    JAA75254.1    GEDC01019442    JAS17856.1    GFTR01004796    JAW11630.1    GFDF01002448    JAV11636.1    KB632364    ERL93558.1    GBBI01001005    JAC17707.1    ADMH02001356    ETN62876.1    UFQS01002102    UFQT01001089    UFQT01002102    SSX13240.1    SSX28859.1    SSX32678.1    GEMB01000384    JAS02737.1    GGFM01004847    MBW25598.1    GECZ01032471    JAS37298.1    GAMD01002946    JAA98644.1    GAPW01002969    GAPW01002968    JAC10630.1    GGFJ01007959    MBW57100.1    CH477657    EAT37699.1    GGFJ01007958    MBW57099.1    AXCM01005439    GGFK01005595    MBW38916.1    GGFK01005593    MBW38914.1    AAAB01008835    JXUM01083834    KQ563399    KXJ73895.1    GECU01020731    JAS86975.1    CVRI01000037    CRK93463.1    ATLV01014581    KE524975    KFB39064.1    GGMS01005825    MBY75028.1    GAKP01000248    JAC58704.1    AXCN02000844    OUUW01000010    SPP85476.1    SPP85475.1    SPP85477.1    GFXV01002951    MBW14756.1    ABLF02039888    CH379061    KRT04900.1    CH963920    EDW78046.1    EAL33324.2    GDHF01011087    GDHF01007080    JAI41227.1    JAI45234.1    KRT04901.1    GGMR01017285    MBY29904.1    CH479195    EDW27299.1    GBHO01042855    JAG00749.1    GBRD01008212    GBRD01008211    JAG57609.1    CH954179    EDV54652.1    CM000361    CM002910    EDX05514.1    KMY91018.1    AE014134    AY113277    AAF53803.1    AAM29282.1    AAN11044.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000007151    UP000037510    UP000053240    + More
UP000007266    UP000235965    UP000075809    UP000053825    UP000076502    UP000078542    UP000005205    UP000005203    UP000002358    UP000078540    UP000053105    UP000245037    UP000053097    UP000078492    UP000279307    UP000000311    UP000078541    UP000008237    UP000007755    UP000027135    UP000002320    UP000019118    UP000015103    UP000030742    UP000000673    UP000008820    UP000075903    UP000075883    UP000076407    UP000075902    UP000075881    UP000069940    UP000249989    UP000075880    UP000183832    UP000075901    UP000030765    UP000075886    UP000268350    UP000007819    UP000001819    UP000007798    UP000008744    UP000192221    UP000075885    UP000008711    UP000000304    UP000000803   

PRIDE

H9J0U5    Q9VIW1   

Pfam

PF00650   CRAL_TRIO        + More
PF03765   CRAL_TRIO_N

Interpro

IPR001251   CRAL-TRIO_dom        + More
IPR011074   CRAL/TRIO_N_dom       
IPR036865   CRAL-TRIO_dom_sf       
IPR036273   CRAL/TRIO_N_dom_sf       

SUPFAM

SSF52087   SSF52087        + More
SSF46938   SSF46938       

Gene 3D

3.40.525.10    

CDD

cd00170  SEC14

ProteinModelPortal

H9J0U5   A0A0S2Z2X8   A0A2H4RMR4   S4PDY3   A0A2H4RMU9   A0A2A4J639   + More
A0A194PPJ0   A0A212FFX7   A0A0L7LMG0   A0A194R4U3   D6WK77   A0A2J7PEI5   A0A151XFF6   A0A0L7QVN0   A0A154PSY4   A0A195D4M7   A0A158NHN1   A0A2H1VTH5   A0A088A1P4   K7J584   A0A195AZZ6   A0A0M8ZXJ1   A0A2P8Y1N2   A0A088AQZ8   A0A026WVT7   A0A195EF31   A0A3L8DGB1   E2B175   A0A195FWL3   A0A1Y1MAD0   E2C3S6   F4WD80   A0A0C9RS57   A0A1Y1M6Q3   E9J2R5   J3JWX5   A0A067R7A4   A0A1Y1KBD3   A0A1Y1KBD8   A0A310SSY3   A0A069DR99   U5EUI3   B0WIP9   A0A1S4JIR2   A0A1Q3FJS7   A0A1L8DYZ0   N6THZ4   R4G2V6   A0A1B6CWG4   A0A224XT63   A0A1L8DYX8   U4UM51   A0A023F8M2   W5JFN1   A0A336N2P7   A0A171B1L9   A0A2M3ZAW7   A0A1B6EH81   T1DG07   A0A023ENW0   A0A2M4BVI7   Q16T91   A0A2M4BVL7   A0A182USL8   A0A182M7C8   A0A2C9H8Q1   A0A182U9P9   A0A2M4ADQ0   A0A2M4ADP7   A0A182KCU4   A0A1S4H0R7   A0A182GRY0   A0A182JEP7   A0A1B6IJ80   A0A1J1HZC9   A0A182SLW3   A0A084VM70   A0A2S2QBB3   A0A034WVU7   A0A182QDV4   A0A3B0KI89   A0A3B0JTP5   A0A3B0JTL6   A0A2H8TKU5   J9JPQ9   A0A0R3NV55   B4N164   Q29K54   A0A0K8VQT4   A0A0R3P0C1   A0A2S2PKI9   B4GWX2   A0A1W4V301   A0A1W4VFB1   A0A0A9VYR6   A0A182P9H0   A0A0K8SWM7   B3NM52   B4Q9Y4   Q9VIW1  

PDB

3W68     E-value=2.79211e-40,     Score=414

KEGG

101742992    no KO assigned | (RefSeq) alpha-tocopherol transfer protein-like

GO

GO:0005215   GO:0005622   GO:0006810   GO:0016020   GO:0005839   GO:0051603   GO:0008483   GO:0006418   GO:0016507   GO:0048384  

Length:

308

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00236

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00933

outside

1  -  308

 

 

Pi

203.834469

Theta

163.66137

Tajima's D

0.826589

CLR

0.101695

CSRT

0.609469526523674

Interpretation

Uncertain