Gene

KWMTBOMO02189

Pre Gene Modal

BGIBMGA003134

Annotation

PREDICTED:_class_E_basic_helix-loop-helix_protein_22-like_[Papilio_polytes]

Location

Bomo_Chr4(-):13492037-13498146      View in EpiBrowser

Transcription factor

bHLH

Location in the cell

Nuclear   Reliability : 3.49

CDS

ATGGAGGGGCGGAGGAATTGGGATGGTGTACCTTTGGGCGAGTCGCATTCGCCGCCGCAGTCGGTGCCTGGTCGAAGGACGCCGCTTGGAGCCGTGGGCCTCGGTGGCTTTTACATGCAAGGAGGACAGCCTCCGCCCCCACAACATTGTTATCCTACGGACGAGAACCAGCCAGAACCAGGAACCAGCTATGGACAAAGGCCAGTCAACGAAAGTAAATCGAAACATAAGATGCGACAAGGTAAAACTGTGCGCCTGAACATAAACGCCCGTGAACGAAGACGTATGCACGATTTAAATGACGCCTTGGACGAACTCCGAGGTGTGATACCATACGCTCATTCGCCGTCCGTACGAAAGCTGTCAAAGATAGCAACGCTTTTATTGGCCAAGAATTATATTATGATGCAGGCTAGCGCGTTAGAAGAACTACGAAGACTTGTAGCGTACTTGCAAGGTACGGCAACAGCGGCGGGTATTGTGCCCCCACCGGGTTTCGATCTAGCCGGTTTTCCAGCGGCAGCCAAGCTCCTTCAGCCTCCAGCCCCGGGCCCTCCACCGCCCCCAGAACCACCCTCTTGA

Protein

MEGRRNWDGVPLGESHSPPQSVPGRRTPLGAVGLGGFYMQGGQPPPPQHCYPTDENQPEPGTSYGQRPVNESKSKHKMRQGKTVRLNINARERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLLAKNYIMMQASALEELRRLVAYLQGTATAAGIVPPPGFDLAGFPAAAKLLQPPAPGPPPPPEPPS

Uniprot

H9J0U7   A0A194PMJ1   A0A194R385   A0A2A4IXY1   A0A2H1W2M0   D6WP00   + More
A0A0K0PQL7   A0A1W4XPV7   U4TS00   U4U7Q7   T1GGJ1   A0A1B0CX77   A0A1W4UYK6   A0A0K8UQV3   A0A034WDH9   A0A0A1WYX2   B4I5C5   B3NMF7   B4P8Q1   B4Q800   Q9VJC1   B3MMG5   B4KEE4   A0A3B0JI90   B4LSV0   A0A0M5IW58   B4MYV4   A0A1S4H1A1   A0A182VFT7   A0A182KUA3   A0A182PAM2   A0A182TTP4   A0A182I5A8   A0A182XKT6   B4GQ98   Q29LC0   A0A2H8TXE3   W5JFG7   A0A336MMB8   B0W182   A0A182F123   A0A026X5J4   A0A1S3D3L0   A0A182WHA6   Q17PH4   A0A182RG52   E0VY24   A0A182ISR1   J9JJL3   A0A2S2N8I4   Q5TNI3   A0A2S2QD44   A0A0L0BQL9   A0A182KEL5   A0A1B6E7Y3   A0A182Y9V7   A0A182QVM2   A0A182NF84   A0A154P6X5   A0A088A1F2   A0A0N0BHQ4   B4JC94   E2C838   E2AGK1   A0A151I618   E9J396   A0A151HZR0   A0A158NLU1   A0A1J1HEQ4   A0A310SI37   A0A0K8UNN3   A0A1A9WLM7   A0A1B0FN87   A0A232EVK5   A0A1A9VQC7   A0A1B0AJM1   K7IQT8   A0A1I8M4F6   T1HBE9   A0A2R7X1H8   A0A182LUS1   A0A1A9Y771   A0A067QHI1   A0A1B6L3K7   F4WU54  

Pubmed

19121390    26354079    18362917    19820115    23537049    25348373    + More
25830018    17994087    17550304    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    18057021    12364791    20966253    15632085    23185243    20920257    23761445    24508170    30249741    17510324    20566863    26108605    25244985    20798317    21282665    21347285    28648823    20075255    25315136    24845553    21719571   

EMBL

BABH01010367    KQ459598    KPI94651.1    KQ460779    KPJ12268.1    NWSH01004924    + More
PCG64581.1    ODYU01005937    SOQ47350.1    KQ971343    EFA04412.1    KP641327    AKQ48969.1    KB630267    KB631411    ERL83502.1    ERL84284.1    KB632146    ERL89102.1    CAQQ02195770    CAQQ02195771    AJWK01033330    GDHF01023247    GDHF01003831    JAI29067.1    JAI48483.1    GAKP01005321    JAC53631.1    GBXI01010245    JAD04047.1    CH480822    EDW55581.1    CH954179    EDV54828.1    CM000158    EDW90159.1    CM000361    CM002910    EDX05333.1    KMY90732.1    AE014134    BT004905    AAF53631.1    AAO47883.1    ADV37079.1    ADV37080.1    AHN54531.1    CH902620    EDV30911.1    CH933807    EDW12912.1    KRG03482.1    KRG03483.1    OUUW01000004    SPP80022.1    CH940649    EDW64861.1    KRF81898.1    CP012523    ALC38674.1    CH963913    EDW77293.1    AAAB01008984    APCN01003844    CH479187    EDW39770.1    CH379060    EAL34125.2    KRT04507.1    GFXV01001829    GFXV01004907    GFXV01006033    GFXV01006701    MBW13634.1    MBW16712.1    MBW17838.1    MBW18506.1    ADMH02001645    ETN61625.1    UFQT01001365    SSX30219.1    DS231820    EDS44056.1    KK107019    QOIP01000007    EZA62714.1    RLU20022.1    CH477191    EAT48643.1    DS235843    EEB18280.1    ABLF02028130    GGMR01000821    MBY13440.1    EAL39075.2    GGMS01006454    MBY75657.1    JRES01001610    KNC21519.1    GEDC01003258    JAS34040.1    AXCN02000825    KQ434819    KZC06880.1    KQ435748    KOX76422.1    CH916368    EDW04127.1    GL453538    EFN75891.1    GL439316    EFN67458.1    KQ978524    KYM93368.1    GL768059    EFZ12709.1    KQ976699    KYM77422.1    ADTU01019857    ADTU01019858    CVRI01000001    CRK86431.1    KQ765234    OAD54000.1    GDHF01024030    GDHF01014144    JAI28284.1    JAI38170.1    CCAG010014258    NNAY01001979    OXU22393.1    ACPB03008942    KK856368    PTY25616.1    AXCM01011269    KK853378    KDR08028.1    GEBQ01021756    JAT18221.1    GL888349    EGI62281.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000218220    UP000007266    UP000192223    + More
UP000030742    UP000015102    UP000092461    UP000192221    UP000001292    UP000008711    UP000002282    UP000000304    UP000000803    UP000007801    UP000009192    UP000268350    UP000008792    UP000092553    UP000007798    UP000075903    UP000075882    UP000075885    UP000075902    UP000075840    UP000076407    UP000008744    UP000001819    UP000000673    UP000002320    UP000069272    UP000053097    UP000279307    UP000079169    UP000075920    UP000008820    UP000075900    UP000009046    UP000075880    UP000007819    UP000007062    UP000037069    UP000075881    UP000076408    UP000075886    UP000075884    UP000076502    UP000005203    UP000053105    UP000001070    UP000008237    UP000000311    UP000078542    UP000078540    UP000005205    UP000183832    UP000091820    UP000092444    UP000215335    UP000078200    UP000092445    UP000002358    UP000095301    UP000015103    UP000075883    UP000092443    UP000027135    UP000007755   

PRIDE

H9J0U7    Q9VJC1   

Pfam

PF00010   HLH        + More
PF16019   CSRNP_N

Interpro

IPR011598   bHLH_dom        + More
IPR036638   HLH_DNA-bd_sf       
IPR023260   Cys/Ser-rich_nuc_prot       
IPR031972   CSRNP_N       

SUPFAM

SSF47459   SSF47459       

Gene 3D

4.10.280.10    

CDD

cd00083  HLH

ProteinModelPortal

H9J0U7   A0A194PMJ1   A0A194R385   A0A2A4IXY1   A0A2H1W2M0   D6WP00   + More
A0A0K0PQL7   A0A1W4XPV7   U4TS00   U4U7Q7   T1GGJ1   A0A1B0CX77   A0A1W4UYK6   A0A0K8UQV3   A0A034WDH9   A0A0A1WYX2   B4I5C5   B3NMF7   B4P8Q1   B4Q800   Q9VJC1   B3MMG5   B4KEE4   A0A3B0JI90   B4LSV0   A0A0M5IW58   B4MYV4   A0A1S4H1A1   A0A182VFT7   A0A182KUA3   A0A182PAM2   A0A182TTP4   A0A182I5A8   A0A182XKT6   B4GQ98   Q29LC0   A0A2H8TXE3   W5JFG7   A0A336MMB8   B0W182   A0A182F123   A0A026X5J4   A0A1S3D3L0   A0A182WHA6   Q17PH4   A0A182RG52   E0VY24   A0A182ISR1   J9JJL3   A0A2S2N8I4   Q5TNI3   A0A2S2QD44   A0A0L0BQL9   A0A182KEL5   A0A1B6E7Y3   A0A182Y9V7   A0A182QVM2   A0A182NF84   A0A154P6X5   A0A088A1F2   A0A0N0BHQ4   B4JC94   E2C838   E2AGK1   A0A151I618   E9J396   A0A151HZR0   A0A158NLU1   A0A1J1HEQ4   A0A310SI37   A0A0K8UNN3   A0A1A9WLM7   A0A1B0FN87   A0A232EVK5   A0A1A9VQC7   A0A1B0AJM1   K7IQT8   A0A1I8M4F6   T1HBE9   A0A2R7X1H8   A0A182LUS1   A0A1A9Y771   A0A067QHI1   A0A1B6L3K7   F4WU54  

PDB

2QL2     E-value=1.17753e-08,     Score=138

KEGG

101743277    no KO assigned | (RefSeq) class E basic helix-loop-helix protein 22

GO

GO:0046983   GO:0008045   GO:0006355   GO:0006511   GO:0019773   GO:0004298   GO:0005839   GO:0051603   GO:0008483   GO:0006418   GO:0016507   GO:0048384  

PANTHER

PTHR13580  

Length:

193

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.45324

Exp number, first 60 AAs:

0.00091

Total prob of N-in:

0.18921

outside

1  -  193

 

 

Pi

215.335375

Theta

161.270851

Tajima's D

1.059953

CLR

0.73811

CSRT

0.674416279186041

Interpretation

Uncertain