Gene

KWMTBOMO02187

Pre Gene Modal

BGIBMGA003029

Annotation

PREDICTED:_protein_FAN-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr4(+):13449657-13460187      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.206 Nuclear   Reliability : 1.815

CDS

ATGGATAAATCGAGATTTTCAATGCTTCTTTTGGAGCCCGGAGAAATATACTTCGAAGACTATTCATGCATTATAACTCAACAGAATTCACTGAAGAGTGACTATTTCAGAGAAGGTCGCTTAAAGTTGTGTTCTAAGTCTCTTTTATTTGAACCAAGAGATTGGACATATCCCCTCATTAAACTACAATTTAGAGACTGTGTTGAACTTTGTCTTGTTGATTCAACTGAACGGAATAATGTTATTGTAGTAAAGGTGAAGCAATATGCTGAAATGTTAGAAGAAAATATTCTAGCACCATATAAATTTTTCTATGAAAAAAAAGATTTTTATATATTTTTCGATTTTGCATCAGCAGAGGAATGCTTAGGACAAATGCAGCAGTTGCTCAGAGCATCAACACTGCATGCTCCGGAACACAACAGTATGGTGGCTACAATATTGCATTCAAGGTATATGAGGATGAAGTTTGATCCGGTTATGATGGATGATTTCACTGAAGAAATAGTTTGTGAACTACAAGCTGAAAAAATATCTCCATTAGTGAGACATCAAGGAAAATTAGCATTGACGCCCACAACTATTTATTTTCAGCCATTCAGTAATATCGAGAGTATCCCCATACTGAAAATAAAGTTTAAAAACCTTAAGAGAATATACAAGAGACGTTTTTTACTAAGGCAAGTTGGGCTTGAAATATACAGTACAGAAGAAAGTTCAGTTCCTCACATATACCTCACTTTCGAAAATGAATATGAGCGGAATAGGATATACCAGATACTTGAGGAATCACCTCATGTCAGCTTGGAGAAAGTGCATGTTGAAGAGATGACATTGCAGTGGCAAAATGGAGTTGTGTCTAACTATGATTATTTGACTTATCTAAATTGTATGGCTGATAGAAGTAAAAATGATTTAACACAGTACCCTGTGTTTCCGTGGATCATAGCTGACTACACATCAGAAACAATAGATTTTACTAAGCCTGAAACATTTCGGGATTTATCAAAACCAATGGGTGCACTAAATCCTGATCGCTTGGAGAAACTGAAAGAAAGATTTCATGAGATGACAGACCCAAAATTTTTATATGGTTCACATTATTCAGCCCCTGGACTTGTTTTGTTTTATTTGGTTCGTAAGTACCCGCAGTACATGTTGTGCCTCCAAAATGGACGTTTCGATCATCCCGACAGAATGTTCAATTCAATGAAAGATGTGTTCAACAACTGTTTGAAAAATATGTCTGATTTTAAGGAATTAGTTCCAGAATTTTATGATGTAGAAGCGAAAGGGGATTTCCTGGTAAACAAATTCGAAATAGACTTTGGTTCCCGACATGATGGTACCAAAGTGAATGACGTGGCGCTACCGCCATGGGCGAAATCTCCCGAAGACTTCGTATGTAAGCTGAGAGACGCTTTAGAGTCTAATTATGTGTCCAAACACATACATTTATGGATCGATTTGATTTTTGGTTATAAACAAAGAGGCGAAGAAGCTATTAAGGCTGAGAACGTATTCCACCATGTATGCTACGAAGGTTCGGTCGATTTGGAATGCATTTACGATATGAACGACAGACACGCTCTGGAAGTGCAGATTATGGAGTTTGGTCAAGTTCCGAAACAACTGTTCACGAAGCCGCACGTCCGAAGAATCTCGCCTCAGATCGCCAAGCCCATGTGCTGCGAAATGAACCGGAGCTATCGAATCGAGTGCATTGACGTTATAAGGCTGCATAAAGAGTCGGTTACGTGTGTTGTCCGTCAATCGGAAAGGATTATTTCTGTTGGAAGAGACGGGACTTTGAAGGTTTATGATGCCGAGAAGAGGAAGCAGATTAGAAGCGTGGCTCTGTCGCCCACGCCGTTGAGTTGTTGCGTGATGGTTGATAATAACGTTGTCGCCGTTGGAGCGTGGGACAATGAAATATACCTATATGACGTGGAGTACGGTCGAGTTGTGGAAAGTTTTCGAGCTCACGATGATTCTGTCAGTTGCCTCACGTGGCTGCATAAAGAACGTCTTCTAATATCCGGCGGCTGCGACGGCGTTGTCCGTGTGTGGGGTAACATTGGAAAGACTGGACAAGCACTCCGGGGTCTCAAAATGGAATTCGATCACGACGGAAAGATAACCTGTTTGACTCACAGAAGACGTCGACACGAAGTTGATGTAATAACGGGCACTTCGGATGGTGAACTTTTCATATGGAGTTTGAATAATAAAGGTCTGATTGCCAAGTTCTCTGCTCACCCTTCCGAGATCACCTGCGTTTGCTTCGTACTATCCGCAGATAGGATTGTCACGGCCAATACGGAGCGAGACATAACTGTTACCGATCTCAGCGTTCTGCATTCGGTCTACCAGAAGAAGTTACCGGATATCGGCAGGTCGCTGTACTGGGACGGTAATAGTTTATTGTGGATTGGCGGAGGGTCCGGCGTGCTCCGACAATGGAACATGCTCACTGTAGCACAGAACGCGGAGCTGAATGCACACGACGGATCAATAAACGATATTTATTTCGATGAGGCCTCGAACACATTGTTAACAGCCAGTGAAGATAGAACAGTTAAAGTATGGAAATTAACACAAGCGTCTTGA

Protein

MDKSRFSMLLLEPGEIYFEDYSCIITQQNSLKSDYFREGRLKLCSKSLLFEPRDWTYPLIKLQFRDCVELCLVDSTERNNVIVVKVKQYAEMLEENILAPYKFFYEKKDFYIFFDFASAEECLGQMQQLLRASTLHAPEHNSMVATILHSRYMRMKFDPVMMDDFTEEIVCELQAEKISPLVRHQGKLALTPTTIYFQPFSNIESIPILKIKFKNLKRIYKRRFLLRQVGLEIYSTEESSVPHIYLTFENEYERNRIYQILEESPHVSLEKVHVEEMTLQWQNGVVSNYDYLTYLNCMADRSKNDLTQYPVFPWIIADYTSETIDFTKPETFRDLSKPMGALNPDRLEKLKERFHEMTDPKFLYGSHYSAPGLVLFYLVRKYPQYMLCLQNGRFDHPDRMFNSMKDVFNNCLKNMSDFKELVPEFYDVEAKGDFLVNKFEIDFGSRHDGTKVNDVALPPWAKSPEDFVCKLRDALESNYVSKHIHLWIDLIFGYKQRGEEAIKAENVFHHVCYEGSVDLECIYDMNDRHALEVQIMEFGQVPKQLFTKPHVRRISPQIAKPMCCEMNRSYRIECIDVIRLHKESVTCVVRQSERIISVGRDGTLKVYDAEKRKQIRSVALSPTPLSCCVMVDNNVVAVGAWDNEIYLYDVEYGRVVESFRAHDDSVSCLTWLHKERLLISGGCDGVVRVWGNIGKTGQALRGLKMEFDHDGKITCLTHRRRRHEVDVITGTSDGELFIWSLNNKGLIAKFSAHPSEITCVCFVLSADRIVTANTERDITVTDLSVLHSVYQKKLPDIGRSLYWDGNSLLWIGGGSGVLRQWNMLTVAQNAELNAHDGSINDIYFDEASNTLLTASEDRTVKVWKLTQAS

Uniprot

H9J0J2   A0A2H1WGS8   A0A194R4V0   A0A2A4J8E8   A0A194PNU2   A0A2A4J8Y1   + More
A0A067RWS9   A0A212FNL9   A0A195CTH5   F4WBE4   A0A1Y1L3J8   D6WL26   A0A151JYT9   A0A151JNX4   A0A158NAY1   A0A154P3C4   A0A026W867   A0A151X9Q2   K7IRK9   A0A232FIE9   E2BDN3   A0A088A020   A0A1B6CKQ1   A0A151HY32   A0A2J7Q0L9   A0A3L8DBC7   U4UMU5   N6UCI9   E2AVQ9   A0A146LEF4   U5EY84   A0A1S4EBL2   E0W257   A0A023F2E5   A0A0V0G862   A0A182GRE3   A0A0L7R750   A0A182HAN4   C3Z9A3   A0A2J7Q0L3   A0A069DX69   A0A1S4FBQ9   Q178M7   A0A293LUN4   A0A0M9A7J9   L7M2A0   A0A224YX83   A0A1B0D8Y6   V5IK32   A0A2S2PTR2   A0A131YA21   V5I329   A0A131Z2H8   B0WJ51   A0A1Q3F1I5   A0A2R5LAD2   A0A1E1XK87   A0A1E1XGM2   A0A310SJP9   J9K1Y9   A0A182RMV5   A0A131XKT9   A0A182XXV5   A0A182W5G0   A0A224XJI4   A0A182ML46   A0A1S3KFF8   A0A210QH51   A0A182XDS3   A0A182IAS9   A0A084VLH5   A0A182PBK7   T1JHX1   A0A182QB95   A0A182MZP2   A0A182UW23   Q7QFD8   A0A2M4CUC0   A0A182UCX3   A0A182FIX5   A0A0P4W6Q1   A0A1W4X102   A0A1B6MJN7   A0A0K2UKF6   A0A182JZX8   A7RRE1   A0A1S3H080   T1HDA8   A0A2G8KT65   A0A182IXE6   R7TBT8   A0A182SWV8   A0A2T7NGU6   A0A3M6U7C9   E9GNF8   A0A0P6AD51  

Pubmed

19121390    26354079    24845553    22118469    21719571    28004739    + More
18362917    19820115    21347285    24508170    20075255    28648823    20798317    30249741    23537049    26823975    20566863    25474469    26483478    18563158    26334808    17510324    25576852    28797301    25765539    26830274    29209593    28503490    28049606    25244985    28812685    24438588    12364791    14747013    17210077    17615350    29023486    23254933    30382153    21292972   

EMBL

BABH01010368    BABH01010369    ODYU01008559    SOQ52268.1    KQ460779    KPJ12270.1    + More
NWSH01002503    PCG68139.1    KQ459598    KPI94653.1    PCG68138.1    KK852415    KDR24364.1    AGBW02005153    OWR55341.1    KQ977279    KYN04001.1    GL888062    EGI68500.1    GEZM01065955    JAV68269.1    KQ971343    EFA03520.2    KQ981451    KYN41624.1    KQ978820    KYN28122.1    ADTU01010480    ADTU01010481    ADTU01010482    KQ434809    KZC06439.1    KK107348    EZA52153.1    KQ982365    KYQ57115.1    NNAY01000176    OXU30300.1    GL447678    EFN86195.1    GEDC01023292    JAS14006.1    KQ976739    KYM75617.1    NEVH01019965    PNF22132.1    QOIP01000010    RLU17452.1    KB632427    ERL95389.1    APGK01040528    APGK01040529    APGK01040530    APGK01040531    KB740982    ENN76367.1    GL443181    EFN62479.1    GDHC01013252    JAQ05377.1    GANO01000452    JAB59419.1    DS235874    EEB19713.1    GBBI01003426    JAC15286.1    GECL01002176    JAP03948.1    JXUM01082443    KQ563313    KXJ74078.1    KQ414643    KOC66673.1    JXUM01031296    JXUM01031297    JXUM01031298    KQ560917    KXJ80361.1    GG666599    EEN50832.1    PNF22130.1    GBGD01000399    JAC88490.1    CH477361    EAT42663.1    GFWV01007703    MAA32433.1    KQ435719    KOX78855.1    GACK01006874    JAA58160.1    GFPF01007767    MAA18913.1    AJVK01012840    AJVK01012841    GANP01000392    JAB84076.1    GGMR01020184    MBY32803.1    GEFM01000441    JAP75355.1    GANP01000391    JAB84077.1    GEDV01003070    JAP85487.1    DS231955    EDS28930.1    GFDL01013631    JAV21414.1    GGLE01002355    MBY06481.1    GFAA01003801    JAT99633.1    GFAC01000776    JAT98412.1    KQ764717    OAD54426.1    ABLF02013208    GEFH01002295    JAP66286.1    GFTR01008133    JAW08293.1    AXCM01000447    NEDP02003738    OWF48047.1    APCN01001316    ATLV01014497    KE524974    KFB38819.1    JH431448    AXCN02001328    AAAB01008846    EAA06265.5    GGFL01004677    MBW68855.1    GDRN01082226    JAI61876.1    GEBQ01003797    JAT36180.1    HACA01021214    CDW38575.1    DS469531    EDO45998.1    ACPB03001475    MRZV01000384    PIK51199.1    AMQN01015098    KB311595    ELT88952.1    PZQS01000012    PVD20376.1    RCHS01002147    RMX49368.1    GL732554    EFX79022.1    GDIP01134480    GDIP01032491    LRGB01002190    JAM71224.1    KZS08495.1   

Proteomes

UP000005204    UP000053240    UP000218220    UP000053268    UP000027135    UP000007151    + More
UP000078542    UP000007755    UP000007266    UP000078541    UP000078492    UP000005205    UP000076502    UP000053097    UP000075809    UP000002358    UP000215335    UP000008237    UP000005203    UP000078540    UP000235965    UP000279307    UP000030742    UP000019118    UP000000311    UP000079169    UP000009046    UP000069940    UP000249989    UP000053825    UP000001554    UP000008820    UP000053105    UP000092462    UP000002320    UP000007819    UP000075900    UP000076408    UP000075920    UP000075883    UP000085678    UP000242188    UP000076407    UP000075840    UP000030765    UP000075885    UP000075886    UP000075884    UP000075903    UP000007062    UP000075902    UP000069272    UP000192223    UP000075881    UP000001593    UP000015103    UP000230750    UP000075880    UP000014760    UP000075901    UP000245119    UP000275408    UP000000305    UP000076858   

PRIDE

H9J0J2    C3Z9A3    V5IK32    V5I329   

Pfam

PF00400   WD40        + More
PF02138   Beach
PF02893   GRAM
PF12894   ANAPC4_WD40
PF14844   PH_BEACH

Interpro

IPR015943   WD40/YVTN_repeat-like_dom_sf        + More
IPR036372   BEACH_dom_sf       
IPR017986   WD40_repeat_dom       
IPR023362   PH-BEACH_dom       
IPR001680   WD40_repeat       
IPR004182   GRAM       
IPR000409   BEACH_dom       
IPR036322   WD40_repeat_dom_sf       
IPR019775   WD40_repeat_CS       
IPR024977   Apc4_WD40_dom       
IPR020472   G-protein_beta_WD-40_rep       

SUPFAM

SSF50978   SSF50978        + More
SSF81837   SSF81837       

Gene 3D

1.10.1540.10     2.130.10.10    

CDD

cd06071  Beach
cd01201  PH_BEACH

ProteinModelPortal

H9J0J2   A0A2H1WGS8   A0A194R4V0   A0A2A4J8E8   A0A194PNU2   A0A2A4J8Y1   + More
A0A067RWS9   A0A212FNL9   A0A195CTH5   F4WBE4   A0A1Y1L3J8   D6WL26   A0A151JYT9   A0A151JNX4   A0A158NAY1   A0A154P3C4   A0A026W867   A0A151X9Q2   K7IRK9   A0A232FIE9   E2BDN3   A0A088A020   A0A1B6CKQ1   A0A151HY32   A0A2J7Q0L9   A0A3L8DBC7   U4UMU5   N6UCI9   E2AVQ9   A0A146LEF4   U5EY84   A0A1S4EBL2   E0W257   A0A023F2E5   A0A0V0G862   A0A182GRE3   A0A0L7R750   A0A182HAN4   C3Z9A3   A0A2J7Q0L3   A0A069DX69   A0A1S4FBQ9   Q178M7   A0A293LUN4   A0A0M9A7J9   L7M2A0   A0A224YX83   A0A1B0D8Y6   V5IK32   A0A2S2PTR2   A0A131YA21   V5I329   A0A131Z2H8   B0WJ51   A0A1Q3F1I5   A0A2R5LAD2   A0A1E1XK87   A0A1E1XGM2   A0A310SJP9   J9K1Y9   A0A182RMV5   A0A131XKT9   A0A182XXV5   A0A182W5G0   A0A224XJI4   A0A182ML46   A0A1S3KFF8   A0A210QH51   A0A182XDS3   A0A182IAS9   A0A084VLH5   A0A182PBK7   T1JHX1   A0A182QB95   A0A182MZP2   A0A182UW23   Q7QFD8   A0A2M4CUC0   A0A182UCX3   A0A182FIX5   A0A0P4W6Q1   A0A1W4X102   A0A1B6MJN7   A0A0K2UKF6   A0A182JZX8   A7RRE1   A0A1S3H080   T1HDA8   A0A2G8KT65   A0A182IXE6   R7TBT8   A0A182SWV8   A0A2T7NGU6   A0A3M6U7C9   E9GNF8   A0A0P6AD51  

PDB

1MI1     E-value=2.6008e-82,     Score=781

KEGG

101743558    K18953 factor associated with neutral sphingomyelinase activation | (RefSeq) protein FAN-like

GO

GO:0016021   GO:0005515   GO:0006511   GO:0019773   GO:0004298   GO:0005839   GO:0051603   GO:0008483   GO:0006418   GO:0016507   GO:0048384  

Length:

869

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.05442

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00103

outside

1  -  869

 

 

Pi

188.563807

Theta

160.330642

Tajima's D

0.709648

CLR

0.008189

CSRT

0.582070896455177

Interpretation

Uncertain