SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02186
Annotation
PREDICTED:_uncharacterized_protein_LOC101743699_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.556
 

Sequence

CDS
ATGCATGAATACATCCATGACTTCTTCCAATTTGGTAGACCAGAGTTGCTGCATAAAATATCTAGAAAAGCATTAACTATGAAAAAGACTTTTAAAGCTAAGGAAACTAATGGATGCATGGATCATATTTTACAATACAGTAGTTTGACTCCTCTACAGAAAGCACGTCGTGCCTTACGTTTGGCTCTGAATAAGGCTGCAGAAGATATAATTTTGCACAATCCATCATATCCATCATGTAGTTTCAAGTTTGATTGTGATGATTCTCCAGATGATCTCTGTGAAGAAGAAGAGTCTGTTGAAATAGAATGGCCTGATATCCCTACTCCAAAAGAGGAGCCAGAAATCCTTCCTAAAACAGAACATATGCAAAAGCAAATACAAGAGAATATGTCACACAACTTTGCAAATATAAGAAGTACGTCATCAAATGAAAGTTTTATGAATTTCAATGAAGACTCTTCTCAGAATGCAAATGATAATTTCTGTGGTCAGTTCTTGAGCATGCCAGAACTTGATCCAGAACCACTTCAAGAAAGGTCTAAGGCAAAAATATCTCCAGAGTTTTATTTTGAAAACAATAAGAAAGAAATTACTGTTAAAAGCTTGAATAGAATGGATAGTGAACAAAATTCACTAAATTGTGTTCTGCCCTCAGTTAGCAATGATCAAAATGATGATATTATCATTAATGAGAGTAATCAACAGAGTCATTACAATGGAGAATGGGACCAGATGCTAAATGATTTTATAGTTAACAAAGGCTCCAGTCAAGAATGCAGTTCAGAACTAAAAGATATTTATTGTCAGATTTCAAAAACTATAGACTTGTTGAATTCTTAA
Protein
MHEYIHDFFQFGRPELLHKISRKALTMKKTFKAKETNGCMDHILQYSSLTPLQKARRALRLALNKAAEDIILHNPSYPSCSFKFDCDDSPDDLCEEEESVEIEWPDIPTPKEEPEILPKTEHMQKQIQENMSHNFANIRSTSSNESFMNFNEDSSQNANDNFCGQFLSMPELDPEPLQERSKAKISPEFYFENNKKEITVKSLNRMDSEQNSLNCVLPSVSNDQNDDIIINESNQQSHYNGEWDQMLNDFIVNKGSSQECSSELKDIYCQISKTIDLLNS

Summary

Similarity
Belongs to the HSF family.
Pfam
PF00447   HSF_DNA-bind
Interpro
IPR027725   HSF_fam        + More
IPR036390   WH_DNA-bd_sf       
IPR036388   WH-like_DNA-bd_sf       
IPR000232   HSF_DNA-bd       
SUPFAM
SSF46785   SSF46785       
Gene 3D

Ontologies

Topology

Subcellular location
Nucleus  
Length:
280
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.01897
outside
1  -  280
 
 

Population Genetic Test Statistics

Pi
48.203459
Theta
136.736889
Tajima's D
-1.09769
CLR
135.440983
CSRT
0.121493925303735
Interpretation
Uncertain
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