Silkworm Genome Informatics Database

Gene

KWMTBOMO02180

Pre Gene Modal

BGIBMGA001112

Annotation

reverse_transcriptase_[Danaus_plexippus]

Location

Bomo_Chr4(-):13303008-13310206 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.507 Nuclear Reliability : 1.371

CDS

ATGGATTCAAAATTCAAGCCAGGCAGCAGCTACCGGAAAAGGCTCCGGGAGGGAGCGGCTATGGTTAGGACAAAGTTGATCCCCACCATGTCCAAACTCGTCGCGCAGCTGGACTCTATGGAGAGTCGCATTCTGAGGAACTCCCCCGTCTTGCAAGAGGGGACTCCCTTGTCGCCGATGCCTGCGCTGGCACACTCTGGGCCTCCCGCGAGGAAGATGGATACCAGCGTGCCCTCACGACCCGTGATGAGTGTGGCGGCGCCCATGCCAGCGCCTACTTCTGTGGCCCCTGTTCCACGAGTGCCTACTCCCGCGCTCCCTCACCCCCCACGGAGGGTTGAGTTGAGGCCTGCGCCGCCTCCCCAAATATCGGCCACCCCTGCATCCGTACAAAGAGGAAGATTAAGGCCTGCGCCAGCGCAGGCTGAAGACATCCGTTCGCCACTGGCGAGGATGATAGACGAGTGGCCGGCGCTGCCGCGGCCCAGGCCTGCAGAGCCGCCAAGCAGAGAGGAAATGGCGGCCTGCATCTCGCGGGCGGTGGCGGTTGAGGTCCGCAAACACTTTGCCGGCCTCGAGGAGATGCTCCGCTCCTCGATTGGTTCCGGAGATGGCGTCCCGGCACCAACAGCCACGACCGCTTTACGGGATCAGGCCGCCCAGCCGACTTCCACTCCTGCCCCATCCGCAAGGGTGGCACGACGTGGAGGCCGGAATATCAGAGGTGCGGGTGCCCAGAATCCCGGCCCGCGATCCCAACCACAGCCTCGCCCCCTTCCTCCGCCCCCGTTAAGCATGGACGAGGGCTGGACAGAAGTGGTGAAGCGGGGCACCACAGCACGGCGACAGATAGCAGCTCTGGCAGCTCCCCGAGGGGGTCGAGCGCCGACCGCTACATCCCGAAACACAGCGCTGGCGGCCGTGACTGCTCCCCGCGAGGGTCGAGCACCGGCCGTTGGCAAAAAGAAAAACAAAAGGAAGAAGCCGCGCGCAGCGGGGTCGGCTGCCGTGGTAGTGACTTTGCTGCCGGCCGCTGCCGAAAAGGGCCTCACCTATAATGAGGTGATGGCCCGGGCGCGTGCAGCTGTAAACTTGACCGAAATCGGGGCAGAGGAAGGTCTACGCTTCCGGCACACCGCCAATGGGGCGAAAATGCTGGAGTGTCCCGGTGCCGATAGTTCTGGCATCGCGGACAAACTAGTGGCGACGCTCCGCGTGGCATTGCCGGAGGAAGAGGTGCGCGTGCACAGGCCGGTGAGGATGGCCGAGATTAGGATCACCGGCCTGGACGACTGCGCCACCAAGGAAGAGGTGGCAGCCGCGATAGCCGCCCAGGGGGGATGTGCTCCGGAGAGCGTGACCGTGGGCGAACTTCGCTCAGGGTACTCCGGGGCCAGATCGGCGTGGGCGCGCTGCCCTGTGGAGGCGGCCACTTCCTTGGCCACCCCTCCACCGGGAAGATCGACGGGGGATCCGGGGAGACTGCGCGTGGGCTGGATAGCGGCCCACGTGCGTCTCCAAGAACCACGTGCCTGGCGATGCCTCCGATGTTTTAGCACGGGGCACGGCCTCGCTAGGTGCACCAGCTCGGTTGACCGCAGTGGTCTTTGTTTCCGTTGCGGCCAGCCGGGCCACAAAGCAGCGTCCTGCACGGCCACCCCGCACTGCGCTCTGTGCGCTGCGGCCGGGCGCAGGGCAAACCACCGAGCGGGAGGCAAGGCGTGTTTCCCGTCCGGTAACAACACCGAACGAAACCGGCGCCGGAGATCAAAGCGCCGGCAAAAGAGAAGGTTGGCCAGAGGAGCACTGGCCAACGCTGTAATCCCCGTTGCGGCGCCGGTGCCGGAGGGCGGGGGCAGCAGTGAAAGGGAGGGGGCGATGGATGACATGCTGTCTCAGAGCATGGCGGAGTGGTCCATAGATGTGGCTGTGGTCGCCGAGCCGTACTTCGTTCCCCCGGCAAATGATTGCTGGTTTGGGGACGACGGCGGCCTGGCGGCCATAGTCATAAGAAGGGACGCGGCGATCCCCCCCCTGGCGATGGTGACCAGGGGCCAAGGGTTCGTCGCGGTGAAGCTGGAAGGGACCGTCGTGATCGGGGCATACTTCTCTCCGAACAGGCCTACCGTCGAGTTCGGGCATTTCCTGGGCGGGATCGGGGCGATTGCTCGCCGCCTCGCTCCTCGTCCAGTGATTCTCGCGGGGGACCTAAATGCGAAATCTGTCGCATGGGGCTCCCCCCGCTCGGACGCTCGTGGTAGGCTACTGGAGAGGTGGGCGAACGCGGCCGGCCTCTGTTTGTTGAATAGAGGGTCGGTTGCGACGTGCGTGCGGTGGCAAGGCGAGTCTATTGTGGACGTTACGTTCGCGAGCCCGGCCATCGCGCGCCGTATCCGCGACTGGAGGGTTTTGGAGGGGGCGGAGACACTGTCCGATCACCGATATATTCGGTTTGATCTCTCCGCCCGCTCCGCAGTCGCGGACGCCCACAGGGATTACCCACGTGGTGCGCCCCGGTCATTCCCCAGGTGGGCACTGAAGCGCCTGAATAAGGCGCTACTGATGGAAGCCTCTACGGTGGCGGCGTGGGCGCCCATGCGTCCACATCCGGTTGAGGTCGAGGGCGAAGCGGGGTGGTTCCGGGACACGATGCGTCGCATCTGCGACGTATCGATGCCCCGGATCAGCCCTCGGTCTCCCAATCGCCAGGCGTACTGGTGGTCGCCCGAAATCGCGCAACTCCGCGTGGAGTGCGTTCGGGCGAGGCGCGAGTGCGCTAGGCATCGCCGCCGTCGCCTGCCGCGTCGCAACGATCCGGTTGCGTTCGCGCTGGTGGAGGCCCGGCTGTACGGCGCATTTCGCGTCGCGCAGAGGGCTTTGCAGCTGGCCATCAGAAGAGCCAAGGATCAACACATGGAGGGTCTCTTGGAGACGCTCGATGGGGATCCGTGGGGGCGACCCTATCATATGGTGCGCAATAAAATGCGCCCATGGGCCCCCCCAATCACGGAGCGTCTCCAGCCTCAGCAGCTGCGGGAAATCGTCTCGGCGCTGTTTCCGCAGGAGCGGGAGGGATTTGTCGCTCCCGCTATGGACCCCCCGTCAGAATACGACGGCGACGTCCCTGCTGAGGTGCCCCATATAACGGGGGCGGAGCTCCATGTGGCAGTGCGTAAAATGTGCGCGAAGGACACTGCACCCGGCCCGGACGGCGTCCATGGCCGGGTTTGGGCCTTGGCTCTTGGTGCCCTGGGGGACCGACTCTTGAGGCTTTACAACTCCTGCCTCGAGTCGGGACGGTTTCCTTCATCGTGGAGGACGGGCAGACTCGTGCTGTTGAGAAAGGAGGGGCGCCCGGCGGATACTGCCGCTGGGTACCGTCCTATCGTGTTGCTGGATGAGGTGGGCAAGCTGCTGGAACGCATTCTGGCAGCCCGCATCATCCAGCATCTAGTCATGGTGGGACCCGATCTGTCGGCGGAGCAGTATGGCTTCCGAGAGGGCCGCTCAACGGTAGACGCGATCCTTCGCGTGCGGTCCCTCTCGGATGAGGCCGTCTCCGGGGGTGGGGTGGCTTTGGCGGTGTCACTCGATATCGCCAATGCGTTCAACACCCTGCCCTGGTCCGTGATAGGGGGGGCGCTGGAACGACACGGAGTGCCCCCCTACCTTCGCCGGCTGGTGGGTTCCTACTTGGAAGACAGATCGGTCACGTGTACCGGACACGGTGGGATCGTGCACCGGTTCCCGGTCGTGCGCGGTGTTCCACAGGGGTCGGTGCTCGGCCCTCTTTTGTGGAATATCGGGTATGACTGGGTGCTGAGGGGTGCCCTCCTCCCGGGCCTGAGTGTAATCTGTTACGCAGACGACACGTTGGTCGTGGCCCGGGGGGGAGTTTTGCTGAGTCTGCCCGTCTTGCTACGGCTGGGGCCCCGGAGAGTGCCACCTGTCGATGCCCATATCGTGGTTGGAGGCGTCCGTATCGGGGTCGGGGTGCAGTTGAAGTACCTCGGCCTCATTCTGGACAGTCGTTGGACCTTCCGTGCTCACTTTCAGAATCTGGTCCCTCGTTTGTTGGGGGTGGCCGGCGCGTTAAGCCGGCTCCTTCCCAATGTCGGGGGGCCTGACCAGGTGACGCGCCGTCTCTATACAGGGGTGGTGCGATCAATGGCCCTATACGGGGCGCCCGTGTGGGGCCAGTCCCTGGCCGTGGGGGTAGCGAAGCTGCTGCAACGGCCGCAACGCACCATCGCGGTCAGGGTCATCCGTGGTTATCGCACCATCTCTTTCGAGGCGGCGTGTGTACTGGCTGGGACGCCGCCTTGGGTCCTGGAGGCGGAGGCGCTCGCTGCTGACTATCAGTGGCGGGCTGACCTTCGTATCCGGGGCGTGGCACGTCCCAGCCCCAGTGTGGTCAGAGCGCGGAGGGCCCAATCTCGGCGGTCCGTGCTGGAGGCATGGTCCAGACGGCTGGCCGATCCTTCGGCTGGTCGTAGGACCGTCGAGGCGATTCGCCCGGTTCTTGTGAATTGGGTGAATCGTGACAGAGGACGCCTCACTTTCCGGCTCACGCAGGTGCTCACTGGGCATAGTTGCTTCGGTGAGTTCCTGCACCGGATCGGAGCCGAGCCGACGGCAGAGTGCCACCATTGTGGTTGCGGCTTGGACACGGCGGAGCACACGCTCGTCGCCTGCCCCGCATGGGAGGGGTGGCGCCGTGTCCTCGTCGCAAAAATAGGAAACGACTTGTCGTTGCCGAGTGTTGTGGCATCGATGCTCGGCGACGACGAGTCGTGGAAGGCGATGCTCGACTTCTGCGAGTGCACCATCTCGCAGAAGGAGGCGGCGGGGCGCAAGAGAGCTACAACAAACAAAATGATAAGGTACGCACACAGTAGTGAAGAAGCGAGCAACCGTATTCCGCGTGTCCAACGAGATCATTTTCCATCCTCGCTCATGGTATGGTTGGGAGTTTCTTATTGGGGCTTAACAGAGGTACATTTTTGTGAGAATGGTGTAAAAACGAATGCAGTTGTGTATCAAAATACAGTCCTGACGAACCTTGTGGAACCTGTTTCTCATACCATGTTCAATAACAGGCACTGGGTATTCCAACAAGATTCGGCGCCAGCTCATAGAGCGAAGAGCACACAAGACTGGCTGGCGGCGCGTGAAATCGACTTCATCCGGCACGAAGACTGGCCCTCCTCCAGTCCAGATTTGAATCCGTTAGATTACAAGATATGGCAACACTTGGAGGAAAAGGCGTGCTCAAAGCCTCATCCCAATTTGGAGTCACTCAAGACATCCTTGATTAAAGCAGCCGCCGATATTGACATGGACCTCGTTCGTGCTGCGGTAGACGACTGGCCGCGCAGATTGAAGGCCTGTATTCAAAATCACGGAGGTCATTTTGAATAA

Protein

MDSKFKPGSSYRKRLREGAAMVRTKLIPTMSKLVAQLDSMESRILRNSPVLQEGTPLSPMPALAHSGPPARKMDTSVPSRPVMSVAAPMPAPTSVAPVPRVPTPALPHPPRRVELRPAPPPQISATPASVQRGRLRPAPAQAEDIRSPLARMIDEWPALPRPRPAEPPSREEMAACISRAVAVEVRKHFAGLEEMLRSSIGSGDGVPAPTATTALRDQAAQPTSTPAPSARVARRGGRNIRGAGAQNPGPRSQPQPRPLPPPPLSMDEGWTEVVKRGTTARRQIAALAAPRGGRAPTATSRNTALAAVTAPREGRAPAVGKKKNKRKKPRAAGSAAVVVTLLPAAAEKGLTYNEVMARARAAVNLTEIGAEEGLRFRHTANGAKMLECPGADSSGIADKLVATLRVALPEEEVRVHRPVRMAEIRITGLDDCATKEEVAAAIAAQGGCAPESVTVGELRSGYSGARSAWARCPVEAATSLATPPPGRSTGDPGRLRVGWIAAHVRLQEPRAWRCLRCFSTGHGLARCTSSVDRSGLCFRCGQPGHKAASCTATPHCALCAAAGRRANHRAGGKACFPSGNNTERNRRRRSKRRQKRRLARGALANAVIPVAAPVPEGGGSSEREGAMDDMLSQSMAEWSIDVAVVAEPYFVPPANDCWFGDDGGLAAIVIRRDAAIPPLAMVTRGQGFVAVKLEGTVVIGAYFSPNRPTVEFGHFLGGIGAIARRLAPRPVILAGDLNAKSVAWGSPRSDARGRLLERWANAAGLCLLNRGSVATCVRWQGESIVDVTFASPAIARRIRDWRVLEGAETLSDHRYIRFDLSARSAVADAHRDYPRGAPRSFPRWALKRLNKALLMEASTVAAWAPMRPHPVEVEGEAGWFRDTMRRICDVSMPRISPRSPNRQAYWWSPEIAQLRVECVRARRECARHRRRRLPRRNDPVAFALVEARLYGAFRVAQRALQLAIRRAKDQHMEGLLETLDGDPWGRPYHMVRNKMRPWAPPITERLQPQQLREIVSALFPQEREGFVAPAMDPPSEYDGDVPAEVPHITGAELHVAVRKMCAKDTAPGPDGVHGRVWALALGALGDRLLRLYNSCLESGRFPSSWRTGRLVLLRKEGRPADTAAGYRPIVLLDEVGKLLERILAARIIQHLVMVGPDLSAEQYGFREGRSTVDAILRVRSLSDEAVSGGGVALAVSLDIANAFNTLPWSVIGGALERHGVPPYLRRLVGSYLEDRSVTCTGHGGIVHRFPVVRGVPQGSVLGPLLWNIGYDWVLRGALLPGLSVICYADDTLVVARGGVLLSLPVLLRLGPRRVPPVDAHIVVGGVRIGVGVQLKYLGLILDSRWTFRAHFQNLVPRLLGVAGALSRLLPNVGGPDQVTRRLYTGVVRSMALYGAPVWGQSLAVGVAKLLQRPQRTIAVRVIRGYRTISFEAACVLAGTPPWVLEAEALAADYQWRADLRIRGVARPSPSVVRARRAQSRRSVLEAWSRRLADPSAGRRTVEAIRPVLVNWVNRDRGRLTFRLTQVLTGHSCFGEFLHRIGAEPTAECHHCGCGLDTAEHTLVACPAWEGWRRVLVAKIGNDLSLPSVVASMLGDDESWKAMLDFCECTISQKEAAGRKRATTNKMIRYAHSSEEASNRIPRVQRDHFPSSLMVWLGVSYWGLTEVHFCENGVKTNAVVYQNTVLTNLVEPVSHTMFNNRHWVFQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAVDDWPRRLKACIQNHGGHFE

Uniprot

NA

ProteinModelPortal

NA

PDB

1WDU E-value=5.05041e-11, Score=169

KEGG

101737183 no KO assigned | (RefSeq) uncharacterized LOC101737183

GO

GO:0003676 GO:0008270 GO:0016021 GO:0032549 GO:0003824 GO:0006520 GO:0008483 GO:0006418 GO:0016507 GO:0048384

Length:

1806

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.17499

Exp number, first 60 AAs:

0.00353

Total prob of N-in:

0.00202

outside

1 - 1806

Pi

295.164136

Theta

175.758855

Tajima's D

0.705333

CLR

149.944285

CSRT

0.574621268936553

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree