Silkworm Genome Informatics Database

Gene

KWMTBOMO02179

Pre Gene Modal

BGIBMGA003026

Annotation

PREDICTED:_uncharacterized_protein_LOC106143591_[Amyelois_transitella]

Location

Bomo_Chr4(+):13289677-13295515 View in EpiBrowser

Location in the cell

Extracellular Reliability : 2.23

CDS

ATGTTGCGGCGGTCGGTCGTGTTTCTGGCACTCTTCGTCTACGTGCAAGGGCGGGCGGTGAACATCAGCAACACATGGGTGCTCCCGGAGGAAGGTTTCCCTGTGTTCTACCGCTACTTCAGGGACCGCATATCCTGGTATGAAGCTGATGCCGTCTGCCAGTTCCACCATGCCAACCTCGTCACAGGTTTCGGGGTTTTAGTTAGTGTTCAAATAAGCGTTTAA

Protein

MLRRSVVFLALFVYVQGRAVNISNTWVLPEEGFPVFYRYFRDRISWYEADAVCQFHHANLVTGFGVLVSVQISV

Uniprot

H9J0I9 A0A2A4JW42 D6WLC4 A0A1B6FEX7 A0A194R4V5 A0A2J7QWB8 + More
A0A2P8ZIB6 A0A1W4V9H9 A0A0L0C2K1 B4PZ97 B5DKQ0 B4H3P6 A0A3B0JDP0 A0A0M5J626 A0A336LNT6 B0XFZ1 T1GQE2

Pubmed

19121390 18362917 19820115 26354079 29403074 26108605 + More
17994087 17550304 15632085

EMBL

BABH01010383 NWSH01000531 PCG75854.1 KQ971343 EFA04672.1 GECZ01021021 + More
JAS48748.1 KQ460779 KPJ12275.1 NEVH01009765 PNF32877.1 PYGN01000048 PSN56231.1 JRES01000984 KNC26481.1 CM000162 EDX01064.1 CH379063 EDY72100.2 CH479207 EDW30997.1 OUUW01000003 SPP78763.1 CP012528 ALC48906.1 UFQS01000031 UFQT01000031 SSW97853.1 SSX18239.1 DS232974 EDS27149.1 CAQQ02103323

Proteomes

UP000005204 UP000218220 UP000007266 UP000053240 UP000235965 UP000245037 + More
UP000192221 UP000037069 UP000002282 UP000001819 UP000008744 UP000268350 UP000092553 UP000002320 UP000015102

Pfam

PF00059 Lectin_C

Interpro

IPR016187   CTDL_fold        + More
IPR016186   C-type_lectin-like/link_sf
IPR001304   C-type_lectin-like

SUPFAM

SSF56436 SSF56436

Gene 3D

3.10.100.10

ProteinModelPortal

H9J0I9 A0A2A4JW42 D6WLC4 A0A1B6FEX7 A0A194R4V5 A0A2J7QWB8 + More
A0A2P8ZIB6 A0A1W4V9H9 A0A0L0C2K1 B4PZ97 B5DKQ0 B4H3P6 A0A3B0JDP0 A0A0M5J626 A0A336LNT6 B0XFZ1 T1GQE2

KEGG

NA

GO

GO:0007399

SignalP

Position: 1 - 19, Likelihood: 0.963910

Length:

74

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

7.07454

Exp number, first 60 AAs:

6.67474

Total prob of N-in:

0.41591

outside

1 - 74

Pi

209.372379

Theta

180.804237

Tajima's D

-1.263251

CLR

148.85022

CSRT

0.0911454427278636

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics