Gene

KWMTBOMO02174

Pre Gene Modal

BGIBMGA003024

Annotation

PREDICTED:_visual_pigment-like_receptor_peropsin_[Amyelois_transitella]

Location

Bomo_Chr4(+):13194777-13199134      View in EpiBrowser

Full name

Visual pigment-like receptor peropsin      

Location in the cell

PlasmaMembrane   Reliability : 4.976

CDS

ATGGGAGTGTTTGGGGCGCTGCTTAACGGCTGGTTGTTCGCTACCTTTATTCATAGCCACTTGTTAATTTTCAAAAGTCACATATTGGTATTCAATCTGTGCGCGGCATCGCTCGGAAGGAATTTACTGGGATTTCCTTTCTCGGGTTCTTCAGCTGTAGCAAAAAGATGGCTGTTCGGTCCATCCTGTTGTCAGCTATTTGCGTTTTTCAATCAATTCTTTGGTGTCTTTCAAATGACTTCAATATTCGTTTTAATATTGGAACGATATATTCAAGTTAAGTTTTATAAGCGTGAAAAATCGGTGTACATAAGGTTGTATTGGACACTGATCGCAGTAAGTTGGATCAATTCATTTCTATTCGCCACTCCTCCTCTGTTCGGATACGGATTATATTCGTGTGACACAACTGGAACATCATGCACCTTTCTTTGGCCTTCAATGTCATCGGGAGCAAAGCAATTGGGTTACGCCGTGCCCTACATTTTAATTTGTGGACTCATACCAATTGTGGCAATGTTTTACTACATGGGAAAAGCGTTAAGATTAGAAAAGATATTTTACAAGGGTGAACAACAAAGGGAACAAAAATGTCTTACCCAGAGCGCACACGCGGTTTGTGTTGGCACATTGGCCTTATGGATTCCAGCAGCTGTCCTAGCGGGATGGCAATGGGTACCGCTCCTCATCAAAGGCTATCGACCGCACGTGCCACCGACACTAGCTTTGATCGCTTCCATTGCTTCTGAAGCAGCAACTACTGTTCCTGTGCTGTGTTACCTAGCCGTGGATGAGAGACTCAGAGCAGCGTTGTTGGGTAGAATGCGAAAACAATACGCTTTACTTCAACCCGAGCGAGCAAAGATTTATAAGAGAGTATAG

Protein

MGVFGALLNGWLFATFIHSHLLIFKSHILVFNLCAASLGRNLLGFPFSGSSAVAKRWLFGPSCCQLFAFFNQFFGVFQMTSIFVLILERYIQVKFYKREKSVYIRLYWTLIAVSWINSFLFATPPLFGYGLYSCDTTGTSCTFLWPSMSSGAKQLGYAVPYILICGLIPIVAMFYYMGKALRLEKIFYKGEQQREQKCLTQSAHAVCVGTLALWIPAAVLAGWQWVPLLIKGYRPHVPPTLALIASIASEAATTVPVLCYLAVDERLRAALLGRMRKQYALLQPERAKIYKRV

Similarity

Belongs to the G-protein coupled receptor 1 family. Opsin subfamily.
Belongs to the G-protein coupled receptor 1 family.
Belongs to the G-protein coupled receptor 2 family.

Keywords

Chromophore   Complete proteome   Disulfide bond   G-protein coupled receptor   Glycoprotein   Membrane   Photoreceptor protein   Receptor   Reference proteome   Retinal protein   Sensory transduction   Transducer   Transmembrane   Transmembrane helix  

Feature

chain  Visual pigment-like receptor peropsin

Uniprot

A0A2A4JSF6   A0A194PPK4   A0A194R3L0   A0A1B6MMX8   A0A1B6K4H0   A0A0C6G2Z6   + More
A0A0C6FZD7   A0A0C6FZG7   E1CFG1   A0A0C6G6P8   A0A0C6FZ99   A0A0C6FZB7   A0A0C6FZF7   A0A0C6FPQ1   A0A0C6FPS0   A0A0C6FPG7   A0A0C6G6P3   A0A0C9LM67   A0A0C6FPI7   A0A0G3Y5J3   A0A1L8F800   A0A1B6ET89   F7BWP4   C3XR28   A0A1S3JHZ2   A0A151M623   A0A142BLT2   A0A0P0YPZ8   A0A2H4KKR6   A0A0H2UI65   A0A3N0Z0K2   A0A3B4DM11   Q543W9   O35214   A0A1L8GAX0   A0A1S3FT77   R9R6L5   A0A2R8Q4C0   A0A182HT24   A0A1L8F3C7   A0A2S2QM89   W5LC48   A0A1W2Q6H2   J9K8Z3   A0A2Z4C5M8   Q17A90   A0A2U8T683   A0A1A8LM78   A0A3B4B3G8   A0A094LU95   A0A2S2PM78   F6UZB2   A0A1S4FAC5   E0R7P4   G3T3L1   A0A1A8NTU5   A0A1V9XRA4   A0A3B5B3N3   T2I4T4   A0A3P8WFL4   A0A182XWZ2   A0A1S3RSC0   A0A2H8TRG1   W5N199   A0A2I4AXG3   A0A182F8X5   A0A3B3D7R5   A0A0F8BCQ8  

Pubmed

26354079    19960196    26034574    27762356    20431018    18563158    + More
22293439    26491964    29410521    10349636    11042159    11076861    11217851    12466851    12040188    16141073    9275222    23594743    23776409    26450929    25329095    15057822    29319122    17510324    25463417    28327890    24010579    24487278    25244985    29451363    25835551   

EMBL

NWSH01000765    PCG74332.1    KQ459598    KPI94664.1    KQ460779    KPJ12282.1    + More
GEBQ01002669    JAT37308.1    GECU01001368    JAT06339.1    LC009259    BAQ54907.1    LC009236    BAQ54883.1    LC009290    BAQ54938.1    AB525082    BAJ22674.1    LC009122    BAQ54765.1    LC009167    BAQ54813.1    LC009202    BAQ54848.1    LC009275    BAQ54923.1    LC009147    BAQ54791.1    LC009185    BAQ54831.1    LC009058    BAQ54696.1    LC009098    BAQ54740.1    BR001239    FAA01168.1    LC009078    BAQ54716.1    KP725074    AKM21242.1    CM004480    OCT67723.1    GECZ01028668    JAS41101.1    AAMC01014454    AAMC01014455    GG666456    EEN69146.1    AKHW03006480    KYO19967.1    KU682725    AMP19653.1    LC009375    BAT23016.1    MF489903    ASW31197.1    ACPB03017884    RJVU01018281    ROL51743.1    AK044717    CH466532    BAC32047.1    EDL12234.1    AF012271    CM004474    OCT81067.1    CR352209    CU302291    JX293360    KT008412    AGK24996.1    ALG92552.1    APCN01000400    APCN01000401    CM004481    OCT66080.1    GGMS01009641    MBY78844.1    AC117142    ABLF02037968    ABLF02037969    ABLF02037974    ABLF02037978    ABLF02037979    ABLF02037980    ABLF02037981    ABLF02037982    ABLF02037985    MF464468    AWU78798.1    CH477338    EAT43163.2    MF434471    MF434472    AWM72030.1    AWM72031.1    HAEF01007935    SBR45648.1    KL278746    KFZ67109.1    GGMR01017951    MBY30570.1    AAMC01052310    AAMC01052311    AAMC01052312    AAMC01052313    AAMC01052314    AY377392    AAR24539.1    OCT81316.1    HAEH01003891    SBR72480.1    MNPL01005422    OQR76027.1    HF566406    CCP46949.1    GFXV01004979    MBW16784.1    AHAT01017896    KQ041021    KKF31418.1   

Proteomes

UP000218220    UP000053268    UP000053240    UP000186698    UP000008143    UP000001554    + More
UP000085678    UP000050525    UP000015103    UP000261440    UP000000589    UP000081671    UP000000437    UP000075840    UP000018467    UP000002494    UP000007819    UP000008820    UP000261520    UP000007646    UP000192247    UP000261400    UP000265120    UP000076408    UP000087266    UP000018468    UP000192220    UP000069272    UP000261560   

PRIDE

O35214   

Pfam

PF00001   7tm_1        + More
PF01825   GPS
PF07545   Vg_Tdu
PF00002   7tm_2
PF00354   Pentaxin

Interpro

IPR000276   GPCR_Rhodpsn        + More
IPR017452   GPCR_Rhodpsn_7TM       
IPR032972   RRH       
IPR002962   Peropsin       
IPR027430   Retinal_BS       
IPR039186   Opsin_invertebrate       
IPR001760   Opsin       
IPR017981   GPCR_2-like       
IPR011520   Vg_fam       
IPR000832   GPCR_2_secretin-like       
IPR001759   Pentraxin-related       
IPR013320   ConA-like_dom_sf       
IPR000203   GPS       

SUPFAM

SSF49899   SSF49899       

CDD

cd15073  7tmA_Peropsin
cd14969  7tmA_Opsins_type2_animals

ProteinModelPortal

A0A2A4JSF6   A0A194PPK4   A0A194R3L0   A0A1B6MMX8   A0A1B6K4H0   A0A0C6G2Z6   + More
A0A0C6FZD7   A0A0C6FZG7   E1CFG1   A0A0C6G6P8   A0A0C6FZ99   A0A0C6FZB7   A0A0C6FZF7   A0A0C6FPQ1   A0A0C6FPS0   A0A0C6FPG7   A0A0C6G6P3   A0A0C9LM67   A0A0C6FPI7   A0A0G3Y5J3   A0A1L8F800   A0A1B6ET89   F7BWP4   C3XR28   A0A1S3JHZ2   A0A151M623   A0A142BLT2   A0A0P0YPZ8   A0A2H4KKR6   A0A0H2UI65   A0A3N0Z0K2   A0A3B4DM11   Q543W9   O35214   A0A1L8GAX0   A0A1S3FT77   R9R6L5   A0A2R8Q4C0   A0A182HT24   A0A1L8F3C7   A0A2S2QM89   W5LC48   A0A1W2Q6H2   J9K8Z3   A0A2Z4C5M8   Q17A90   A0A2U8T683   A0A1A8LM78   A0A3B4B3G8   A0A094LU95   A0A2S2PM78   F6UZB2   A0A1S4FAC5   E0R7P4   G3T3L1   A0A1A8NTU5   A0A1V9XRA4   A0A3B5B3N3   T2I4T4   A0A3P8WFL4   A0A182XWZ2   A0A1S3RSC0   A0A2H8TRG1   W5N199   A0A2I4AXG3   A0A182F8X5   A0A3B3D7R5   A0A0F8BCQ8  

PDB

5WKT     E-value=1.56154e-05,     Score=114

KEGG

101744575    no KO assigned | (RefSeq) visual pigment-like receptor peropsin

GO

GO:0016021   GO:0004930   GO:0007601   GO:0009881   GO:0018298   GO:0007602   GO:0005887   GO:0001750   GO:0008020   GO:0007186   GO:0071482   GO:0005502   GO:0005503   GO:0016038   GO:0032549   GO:0003824   GO:0006520   GO:0008483   GO:0006418   GO:0016507   GO:0048384  

PANTHER

PTHR24240:SF77  

Subcellular location

Membrane  

Length:

293

Number of predicted TMHs:

6

Exp number of AAs in TMHs:

137.02627

Exp number, first 60 AAs:

25.12857

Total prob of N-in:

0.75237

POSSIBLE N-term signal

sequence

inside

1  -  1

TMhelix

2  -  24

outside

25  -  65

TMhelix

66  -  88

inside

89  -  100

TMhelix

101  -  123

outside

124  -  155

TMhelix

156  -  178

inside

179  -  203

TMhelix

204  -  226

outside

227  -  240

TMhelix

241  -  263

inside

264  -  293

 

 

Pi

398.777841

Theta

225.137687

Tajima's D

2.428743

CLR

0.011448

CSRT

0.936003199840008

Interpretation

Uncertain