Gene

KWMTBOMO02173

Pre Gene Modal

BGIBMGA003139

Annotation

PREDICTED:_protein_msta?_isoform_A-like_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr4(-):13182406-13193456      View in EpiBrowser

Full name

SET domain-containing protein SmydA-8, isoform A       + More
SET domain-containing protein SmydA-8, isoform B      

Location in the cell

PlasmaMembrane   Reliability : 2.035

CDS

ATGCTATCATCAAACCAATTGACGCAGATAGTGCACAAATATCTCGGTCTCTATAACTCTACAGACTGCATACAGCAATTCTGCAAATGGACGGTCCGAGAATCAACGGTGGGCGGTCGAGGAATAATAGCCACTGAAGACATTCCGTGTGGAGAAGTTTTGTTTGTTGATCGTCCTTTGATTTTTGGTCCGCGTTGTGGAAATGTCATCAGAGGATGTACAGTTTGCTCCAAATTCGAAGATGACGGATTCTTTAAGTGTTCTCTGTGCGCCCTATTGCTATGCTCAACGGAATGTCAAGATTTTCACACTGATGATTGCAACATTATTGCTGGTTGGAAGAAAAAAGTTGACATTGAAGAAATAGACGAAATTGTAATGTCACATGCCCTGGCCGCCATAAGAGCATTGTCTTTAAACCAAGAACAAAAACAATTTATGAGCGCTTTAGCAGCACACACATTACCACAACATGGCGGTGAAATCATAAAACTCAAGCAGTATTTTGAAATACCTGAAGAAATTGAAAAAGATATGATATTCGCTTGTCAAGCTTTAGATACAAATGCATTTCAAATTGCAACACCGTACGGCAAGAAGGAAATGAGTCTTCGTGGTTTGTACCCTGTAGCAGGACTCATGAATCATAGTTGTTTGCCAAATGCGACATATAGTTACAACGATGAACGTCAAATGATCGTTAAAACGAGTCGATTCATTGCAGCTGGAACTGAAATATTCACTTGCTATTCTGGGATTTTATGGGGAACGACGACTCGACGCAGTTATTTATTCAAAACAAAACATTTTTGGTGCAAGTGTGAACGATGCGCGGATCCTACGGAAAACGGTACTATGCTCGCTGCCCTCTGTTGTTTAGCGAACGAATGTACGACGGGATATCTTCTGCCGATCGAACCACTGAAGTCTTCGTCTTCATGGCAATGTACAGCGTGTGGTCTCCGCGTGCCAAGTAAAATTATCTACAAAATACAGGTAGCTTTAGGGACCTTAATAAGCACTTTAGACTTCCAAAACCTTGAACAAATGGAGAATTTCCTAATGAAAAGGGTCACAAAATTCGTGCCAAAAGTTAATCACATAGTCGTCGACCTCCAATGCCGACTCATATGGGAATTCGGAGACGTACAAGGGTATCGCTGGCACGAGCTAACGGAATCGCGGCTATCCCTGAAATTGGTCCTGTGCCGAGATATATTGGCCACGCTGGCGGCCCTGGGTTTAGAAGACTCGCACCTGTGCGGCCTGCTATTCTACCACCTGCACGCCACGCTAGCAGAACGCGCCAGGCGCCACCCAGACTTATATGACGGTCTGAAATCAGAAATAGAGAGTACCATAGAAAGAGCGTACCGAATCCTCCGAGGCGATATATCCGCTCCAGTTGACCTTGAGTTGAGATATCGCTATCTTGGTCCCGATTGTGAAAAACCACAGCAAGAGAGATTCTCCATCCTCAGTATATAA

Protein

MLSSNQLTQIVHKYLGLYNSTDCIQQFCKWTVRESTVGGRGIIATEDIPCGEVLFVDRPLIFGPRCGNVIRGCTVCSKFEDDGFFKCSLCALLLCSTECQDFHTDDCNIIAGWKKKVDIEEIDEIVMSHALAAIRALSLNQEQKQFMSALAAHTLPQHGGEIIKLKQYFEIPEEIEKDMIFACQALDTNAFQIATPYGKKEMSLRGLYPVAGLMNHSCLPNATYSYNDERQMIVKTSRFIAAGTEIFTCYSGILWGTTTRRSYLFKTKHFWCKCERCADPTENGTMLAALCCLANECTTGYLLPIEPLKSSSSWQCTACGLRVPSKIIYKIQVALGTLISTLDFQNLEQMENFLMKRVTKFVPKVNHIVVDLQCRLIWEFGDVQGYRWHELTESRLSLKLVLCRDILATLAALGLEDSHLCGLLFYHLHATLAERARRHPDLYDGLKSEIESTIERAYRILRGDISAPVDLELRYRYLGPDCEKPQQERFSILSI

Similarity

Belongs to the class V-like SAM-binding methyltransferase superfamily.

Keywords

Alternative splicing   Complete proteome   Methyltransferase   Reference proteome   S-adenosyl-L-methionine   Transferase  

Feature

chain  SET domain-containing protein SmydA-8, isoform A

Uniprot

H9J0V2   A0A2A4JRU9   A0A194PU53   A0A194R3A3   A0A2H1WK83   A0A0L7LAT1   + More
A0A2H1WJV1   A0A2A4JQL2   D6WLG5   E2APG8   A0A1Y1MC08   A0A1Y1MDX9   A0A1Y1MF86   E9J2E4   A0A195B1H2   A0A195DJ28   A0A154P0F2   A0A3L8DDT9   A0A158NDG8   A0A195FI27   A0A151X0G6   A0A0N0U4Z4   A0A088AD93   A0A2A3ECJ9   A0A2P8ZCM0   A0A067QYV6   A0A1B6D0F2   A0A1B6E7R7   A0A0L7RA61   U4UGP7   A0A1B0CSC2   A0A1W4VT46   A0A1A9X4K0   A0A026WKD8   X2JDK3   O46040   A0A1A9XKB7   A0A1A9UU31   B5RJI3   B3MYS6   A0A1A9ZB74   B3P8Y6   A0A0A1XAS4   W8BTV1   A0A0Q5SS11   A0A1I8PSS9   A0A0K8V843   A0A1I8PSQ9   A0A0R3NXV9   A0A1I8PSV0   B4L5T8   A0A1B6C5C4   A0A1I8N6L9   B4NQ06   A0A1B0FK75   B4H372   A0A1Q3FS50   A0A1S3CTS0   A0A1J1IR78   A0A3Q0IJ68   B0XG67   T1PEZ7   A0A1I8N6M1   B5DKF2   A0A182FML8   A0A034W4S6   A0A182GQP9   A0A1W4VTU3   A0A0M3QZK5   A0A0Q5SY93   A0A1I8PSQ3   B4M7C7   P83501   W8BNI2   W5JT12   J9LMV0   A0A182PNS3   A0A0A1XGI4   B4L398   A0A0K8UI74   A0A3B0J935   A0A182MJM8   A0A182IZV8   A0A1I8N6M0   A0A1I8N6L8   A0A0A1WXV0   Q16ZX7   A0A1S4FI78   A0A1B0CEQ0   B4M3S5  

EC Number

2.1.1.-

Pubmed

19121390    26354079    26227816    18362917    19820115    20798317    + More
28004739    21282665    30249741    21347285    29403074    24845553    23537049    24508170    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    10779958    10731137    17994087    25830018    24495485    15632085    25315136    25348373    26483478    20920257    23761445    17510324   

EMBL

BABH01010388    NWSH01000765    PCG74344.1    KQ459598    KPI94665.1    KQ460779    + More
KPJ12283.1    ODYU01009118    SOQ53312.1    JTDY01001935    KOB72509.1    ODYU01009145    SOQ53363.1    PCG74345.1    KQ971343    EFA04109.2    GL441542    EFN64667.1    GEZM01035428    GEZM01035426    GEZM01035424    GEZM01035417    JAV83234.1    GEZM01035436    GEZM01035435    GEZM01035433    GEZM01035418    GEZM01035416    JAV83218.1    GEZM01035434    GEZM01035432    GEZM01035431    GEZM01035430    GEZM01035429    GEZM01035427    GEZM01035425    GEZM01035423    GEZM01035422    GEZM01035421    GEZM01035420    GEZM01035419    GEZM01035415    GEZM01035414    GEZM01035413    JAV83240.1    GL767845    EFZ13004.1    KQ976690    KYM78049.1    KQ980800    KYN12885.1    KQ434787    KZC05302.1    QOIP01000009    RLU18491.1    ADTU01012513    ADTU01012514    KQ981560    KYN39922.1    KQ982626    KYQ53461.1    KQ435811    KOX72882.1    KZ288285    PBC29465.1    PYGN01000104    PSN54241.1    KK853182    KDR10160.1    GEDC01018154    JAS19144.1    GEDC01003404    JAS33894.1    KQ414620    KOC67641.1    KB632288    ERL91523.1    AJWK01025894    KK107199    EZA55564.1    AE014298    AHN59283.1    AJ238707    AL009193    AAN09072.1    BT044457    ACH92522.1    CH902632    EDV32770.1    CH954183    EDV45591.1    GBXI01005903    JAD08389.1    GAMC01006167    JAC00389.1    KQS26034.1    GDHF01017386    JAI34928.1    CH379063    KRT05812.1    CH933811    EDW06547.1    GEDC01028611    JAS08687.1    CH964291    EDW86231.2    CCAG010004881    CH479205    EDW30765.1    GFDL01004614    JAV30431.1    CVRI01000057    CRL02052.1    DS232996    EDS27285.1    KA647264    AFP61893.1    EDY72001.2    GAKP01008351    JAC50601.1    JXUM01081058    JXUM01081059    JXUM01081060    JXUM01081061    KQ563224    KXJ74253.1    CP012528    ALC49539.1    KQS26033.1    CH940653    EDW62694.2    GAMC01006168    JAC00388.1    ADMH02000168    ETN67517.1    ABLF02029157    GBXI01003793    JAD10499.1    CH933810    EDW07026.1    GDHF01033587    GDHF01026086    JAI18727.1    JAI26228.1    OUUW01000003    SPP78717.1    AXCM01006441    GBXI01010408    JAD03884.1    CH477481    EAT40226.1    AJWK01009066    CH940651    EDW65450.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000037510    UP000007266    + More
UP000000311    UP000078540    UP000078492    UP000076502    UP000279307    UP000005205    UP000078541    UP000075809    UP000053105    UP000005203    UP000242457    UP000245037    UP000027135    UP000053825    UP000030742    UP000092461    UP000192221    UP000091820    UP000053097    UP000000803    UP000092443    UP000078200    UP000007801    UP000092445    UP000008711    UP000095300    UP000001819    UP000009192    UP000095301    UP000007798    UP000092444    UP000008744    UP000079169    UP000183832    UP000002320    UP000069272    UP000069940    UP000249989    UP000092553    UP000008792    UP000000673    UP000007819    UP000075885    UP000268350    UP000075883    UP000075880    UP000008820   

PRIDE

H9J0V2    X2JDK3    O46040    P83501   

Pfam

PF00856   SET        + More
PF01753   zf-MYND

Interpro

IPR001214   SET_dom        + More
IPR011990   TPR-like_helical_dom_sf       
IPR002893   Znf_MYND       

Gene 3D

1.25.40.10    

ProteinModelPortal

H9J0V2   A0A2A4JRU9   A0A194PU53   A0A194R3A3   A0A2H1WK83   A0A0L7LAT1   + More
A0A2H1WJV1   A0A2A4JQL2   D6WLG5   E2APG8   A0A1Y1MC08   A0A1Y1MDX9   A0A1Y1MF86   E9J2E4   A0A195B1H2   A0A195DJ28   A0A154P0F2   A0A3L8DDT9   A0A158NDG8   A0A195FI27   A0A151X0G6   A0A0N0U4Z4   A0A088AD93   A0A2A3ECJ9   A0A2P8ZCM0   A0A067QYV6   A0A1B6D0F2   A0A1B6E7R7   A0A0L7RA61   U4UGP7   A0A1B0CSC2   A0A1W4VT46   A0A1A9X4K0   A0A026WKD8   X2JDK3   O46040   A0A1A9XKB7   A0A1A9UU31   B5RJI3   B3MYS6   A0A1A9ZB74   B3P8Y6   A0A0A1XAS4   W8BTV1   A0A0Q5SS11   A0A1I8PSS9   A0A0K8V843   A0A1I8PSQ9   A0A0R3NXV9   A0A1I8PSV0   B4L5T8   A0A1B6C5C4   A0A1I8N6L9   B4NQ06   A0A1B0FK75   B4H372   A0A1Q3FS50   A0A1S3CTS0   A0A1J1IR78   A0A3Q0IJ68   B0XG67   T1PEZ7   A0A1I8N6M1   B5DKF2   A0A182FML8   A0A034W4S6   A0A182GQP9   A0A1W4VTU3   A0A0M3QZK5   A0A0Q5SY93   A0A1I8PSQ3   B4M7C7   P83501   W8BNI2   W5JT12   J9LMV0   A0A182PNS3   A0A0A1XGI4   B4L398   A0A0K8UI74   A0A3B0J935   A0A182MJM8   A0A182IZV8   A0A1I8N6M0   A0A1I8N6L8   A0A0A1WXV0   Q16ZX7   A0A1S4FI78   A0A1B0CEQ0   B4M3S5  

PDB

3OXG     E-value=1.53824e-09,     Score=151

KEGG

101744718    no KO assigned | (RefSeq) protein msta, isoform A-like

GO

GO:0010629   GO:0042826   GO:0008757   GO:0000790   GO:0034968   GO:0008168   GO:0005737   GO:0005634   GO:0046872   GO:0005515   GO:0008236   GO:0006351   GO:0032549   GO:0003824   GO:0006520   GO:0008483   GO:0006418   GO:0016507   GO:0048384  

Length:

495

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.07262

Exp number, first 60 AAs:

0.00041

Total prob of N-in:

0.06223

outside

1  -  495

 

 

Pi

230.591031

Theta

166.075174

Tajima's D

0.993408

CLR

0.081938

CSRT

0.656417179141043

Interpretation

Uncertain