SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02167  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA003021
Annotation
Protein_unzipped_[Papilio_xuthus]
Full name
Protein unzipped      
Alternative Name
Protein zipper
Location in the cell
PlasmaMembrane   Reliability : 2.332
 

Sequence

CDS
ATGAAAAACAGAAGTCGTCAAAGCGGTTGGTGGATATTGCTAGTAACAATGGCGCTGATTGCACCGGCTGCATCTGAGGCTGGAGTTAACCTTTTCAATTCAAGATTGAAACAAATCACTACTTCAAGCACTCTGAAATGGAAGAATTTCAGAAAAGAATTCATGAATAATTACGTTGTTGGAGCAGAATCTGAAGAAGGTCCCATATATCTCTGCAGAGCTCGACATGAAGGAGATATGATACTTGGACAATTGAAGCCAGATTATAGTTCTTGTGCTGTTTCTGGGAGCAAGAGCTACAGCATATTCGAAGTACTTGAAAATATAGAAAACGCATCTTTAATTGATTGGATCCCATGGTTTAAATTTAATGCAAGACCTCACGGAGCTGTAGCAAGTTCTTTTAGTGATTCTGTGTTTATTGGGAGAATGAAAGCTTCAAGCGGTTATTCGCATTACATAGGAAGAATCGTTTATGAAAGTGCTATTGGACGACTTATAACGTTTGATGATAAAAACAACGACTTAATTGAAAACAGCGGTGACATTTTAGTAGAAATAGAACCAGTTAGTTATAAATTAGAAGATGTTCAATTAGATTTAAAAACTGAACATATACGTCAAAACGATCCTGAGGTATTCGAAGTACGAACTCTAAGAAACGATGAAGAACTTGGCGCTACAGTTACCACAGAAATTGAATACGCTTATAACTACACTGTTTCTTGGGGCCACGGGCACGGCATAGCTATTGGTTTGAACACTACCATTGAAATGGCAGATGGTGATGTTTTACCGCCAATCCAATGGGCTAATCCGTTCACAGAAAGGCGAACCAGGTTGCATAAGCTTGAAAAATATTTAGAACCAGGGACCGCTTGCAATGTAACATTCAGTGGCAACCGTACGGCTAGAGATGTCGAATATACCGCTAAGCTGATCACCTTTTACAATGGAAAAGACCCACGCTCTCGTCAAATGCGTGGACAACGTATAGAAAATACATTAGAAGTTGAGGCAGTTTATGGTGATATATACTTTCTTGGCAACAGCAGCTTAGTACCTACTACTACAACTACAACCACAACTACCACAACCACCACTACCACAACACCTGCTCCAACCGTTCCTCCAGCACCTGAGGAAAACGATATCGCAAGTCCAATGAAAAAACCAAACACACCGGTGGAAGTAGATAGCAACGATATGATGGGTGATAGCGGAGAAGGAATGATTAAAACACCTCCAGTAAAAGATGATAATATCAACCGTTCCGTTGTGGGTGGCCTTGGCAGTACACCTAATTCGGGTAACACAATGCGATTTTTTTACGTTACATTAGTACTCCCAATATTTTCTTTTTTCCATTAA
Protein
MKNRSRQSGWWILLVTMALIAPAASEAGVNLFNSRLKQITTSSTLKWKNFRKEFMNNYVVGAESEEGPIYLCRARHEGDMILGQLKPDYSSCAVSGSKSYSIFEVLENIENASLIDWIPWFKFNARPHGAVASSFSDSVFIGRMKASSGYSHYIGRIVYESAIGRLITFDDKNNDLIENSGDILVEIEPVSYKLEDVQLDLKTEHIRQNDPEVFEVRTLRNDEELGATVTTEIEYAYNYTVSWGHGHGIAIGLNTTIEMADGDVLPPIQWANPFTERRTRLHKLEKYLEPGTACNVTFSGNRTARDVEYTAKLITFYNGKDPRSRQMRGQRIENTLEVEAVYGDIYFLGNSSLVPTTTTTTTTTTTTTTTTPAPTVPPAPEENDIASPMKKPNTPVEVDSNDMMGDSGEGMIKTPPVKDDNINRSVVGGLGSTPNSGNTMRFFYVTLVLPIFSFFH

Summary

Keywords
Complete proteome   Developmental protein   Differentiation   Glycoprotein   Membrane   Neurogenesis   Reference proteome   Signal   Transmembrane   Transmembrane helix  
Feature
chain  Protein unzipped
EMBL
BABH01010395    NWSH01000765    PCG74342.1    ODYU01000372    SOQ35042.1    KQ459598    + More
KPI94672.1    KQ460709    KPJ12737.1    JTDY01000079    KOB78992.1    AGBW02012845    OWR44343.1    GDQN01007344    JAT83710.1    KK852840    KDR15190.1    KQ435922    KOX68546.1    KQ434936    KZC11917.1    NEVH01009081    PNF33808.1    KQ414632    KOC67199.1    GL888480    EGI60268.1    PYGN01000343    PSN48106.1    ADTU01015164    JR049312    AEY60927.1    KQ977793    KYM99646.1    ACPB03010241    KZ288405    PBC26164.1    KQ981625    KYN39068.1    DQ071552    AAY82248.1    GEDC01002747    JAS34551.1    KQ982339    KYQ57336.1    GL447585    EFN86325.1    GL764074    EFZ18643.1    KQ971342    EFA03053.1    GEZM01046052    JAV77556.1    GL434441    EFN74924.1    LJIG01000831    KRT86109.1    APGK01028301    KB740686    KB631083    KB632224    ENN79541.1    ERL84084.1    ERL90219.1    KK854087    PTY11008.1    CH480838    EDW49301.1    CM000362    CM002911    EDX08654.1    KMY96513.1    CH954179    EDV57115.2    CM000158    EDW92646.2    AE013599    AHN56670.1    X07450    AY052139    GFDF01002997    JAV11087.1    GDHF01018426    GDHF01014036    GDHF01012455    GDHF01004554    JAI33888.1    JAI38278.1    JAI39859.1    JAI47760.1    CH902619    EDV37258.1    KPU76662.1    GBXI01010492    GBXI01005542    GBXI01002385    GBXI01001545    JAD03800.1    JAD08750.1    JAD11907.1    JAD12747.1    AJWK01013172    GAKP01014560    GAKP01014559    GAKP01014558    GAKP01014557    GAKP01014556    GAKP01014555    GAKP01014554    JAC44394.1    OUUW01000001    SPP72671.1    CH963849    EDW74061.1    SPP72672.1    CH479183    EDW36151.1    CM000071    EAL25723.3    KRT02483.1    CH940648    EDW60170.2    KRF79286.1    GAMC01017850    JAB88705.1    KA647671    AFP62300.1    JXJN01013911    CCAG010023635    CH933882    EDW05468.2    ATLV01013356    KE524854    KFB37753.1    CP012524    ALC42815.1    UFQT01001856    SSX32027.1    AXCN02001074    AXCN02001075    UFQS01000766    UFQT01000766    SSX06720.1    SSX27066.1    GDIP01029559    JAM74156.1    GDIQ01017438    JAN77299.1    LRGB01001021    KZS13823.1    GDIQ01168424    JAK83301.1    GDIQ01034322    JAN60415.1    GAPW01001083    JAC12515.1    JXUM01098494    JXUM01098495    KQ564424    KXJ72309.1    CH477203    EAT48001.1    APCN01002368    AAAB01008986    EAA00798.4   
Pfam
PF11901   DUF3421
Interpro
IPR024518   DUF3421        + More
IPR006616   DM9_repeat       

Ontologies

Topology

Subcellular location
Membrane  
SignalP
Position:   1 - 27,         Likelihood:  0.989102
 
 
Length:
456
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.11206
Exp number, first 60 AAs:
21.1596
Total prob of N-in:
0.91827
POSSIBLE N-term signal
sequence
inside
1  -  6
TMhelix
7  -  29
outside
30  -  456
 
 

Population Genetic Test Statistics

Pi
193.02198
Theta
200.706311
Tajima's D
-0.892844
CLR
1019.627226
CSRT
0.15969201539923
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 IEDVQIDIK 100.00 1e-09
26822097 KPNTPVEVDSNDMMGDSGEGMIK 95.24 2e-08
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