SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02166
Pre Gene Modal
BGIBMGA003143
Annotation
Protein_FAM73B_[Papilio_xuthus]
Location in the cell
Nuclear   Reliability : 2.402
 

Sequence

CDS
ATGGCACCGCCAAGACGAATTTCGAATCAACAATTAGAGGAGCTAATAAGTTATTTGGAGGAGAATAAGGAAATGTCAAAAGGACTGGTGCCCGGTTCGGTATTATCACACCAAGAAACTCGACAGAAGTGGAGCTTTCTCACAAAAAGGCTCAATGCTCTGCAGGGCGGTGCATTAAAGTCCGCAGATGGTTGGAGGAAGTATTGGGTTGAATGGCGACACAAATGCAGGAAAAAAGCTAGGCGCAAGTTAGCCAATAGCACTTTAAAGTTGAACTTTAGTGATTTGGAACTTAGATCATTAGAGATCAGCGGTGACACTTCTATGACAACTAATATTCCTGAATTAAAGACGGACAATGATGAAGAGGACGATTCAGACTCAATACCACTTGACAGTGTTAAAAGTCATACTCCTCCTATAAAATTAAAGAAAAGGAGATCCACTTCAAAAATGATGGGAATACATGTAGAAGAAGATAATGCATCGTTGCCACCTAAGTGGGCTTTAGACATGGAAGAGAGACGCATTGCAGCTCAAGAACGAATGGCTGAAGCACTAGAATCTATAGCCTCTATAATGAGGAGGATGGAGGCACTAGAAACGAGCATAAACTACTGGGAAGACGCGTTGGCCGCTTTTTCTCTGGGCGCGCGCGGTGGTACTTCAGGCACGCTGGCGCTCACTTCACCAGAGGAGGCAGAGTTCTGTCGGGAGATACAAGATCTGCTACAGAATGCTTACATGTTACAGGAGCGGTGCGAGCTGCTGTTCTTGGACCAGCGCTCGGTGCTGTTCCGGTCGGAGAGCGGCGGCTCGGTGCGCGCCCGCACGCGCCTGCTCTCCTCGCACACGCGCCGCGACCACTACTCCAGCGCGGAGTCCTTCGCCTCCGCTGAGGATCAGGTGGCTGACCTCCGAGACTTTGATGATCTATCGGAAGCGTTGCCTGAATTAGAAAATTTAGAACTGTATCAGGCCGCCGTTAAACAATTAGAAAATGGAATACCCTACAGGACGCTCCGCACGGAGGTGGTGCAGTGCGGCTCGGACGCGGAGTTCCTGTGCAAGCTGCAGTGTCTGCGCCGCGCCTTCCAGCACGCCCTCCGCGCGCCCGACCTGCGCGCCTGGTTCCAGGACGCCGGCCGCCAGGTGCTCACCGACCTGCTGCTCTACGCGGACAAGGAACCGAAGGAGTTTTTAGTGGCGTACGAAGAAATGGTTTCGTGGGCAACTGACGACGCCAATTGGCCTATTATCGAAAATGAATTGACAAGCAAAGGGGTGAAGGCACTGACGTTCTACGACATAGTACTGGACTACATACTGTTGGACGCCTTCGAAGACTTGGCTTCCCCCCCGTCGTCCGTGTTGGCGGTCGTCAGGAACCGTTGGCTTTCGGACGGATTTAAAGAAAGCGCACTGACGACCGCGGTGTGGTCAGTTATAAAAGCAAAGAGACGCTACCTCCAGTACCCGGACGGTTTCATGGCCCATTTTTATTCGATATCCGAACATCTGCTGCCGGTGCTCGTGTGGGGCTTCCTCGGGCCGCAGGAGAGACTAAGGGACGTTTGCGAGACGTTCCAAGCAGAGATCGTGGGCTTCATCACGGATCTGTTTAGTTTCCAAAAGTGCCGGTACACCACCGTCGAAGACCTGGCCACTGATATAATGCAACACGCGAGGCTCAGGAGTGCCAACATCACGGACAAACTATCGGAGCGTATTTAA
Protein
MAPPRRISNQQLEELISYLEENKEMSKGLVPGSVLSHQETRQKWSFLTKRLNALQGGALKSADGWRKYWVEWRHKCRKKARRKLANSTLKLNFSDLELRSLEISGDTSMTTNIPELKTDNDEEDDSDSIPLDSVKSHTPPIKLKKRRSTSKMMGIHVEEDNASLPPKWALDMEERRIAAQERMAEALESIASIMRRMEALETSINYWEDALAAFSLGARGGTSGTLALTSPEEAEFCREIQDLLQNAYMLQERCELLFLDQRSVLFRSESGGSVRARTRLLSSHTRRDHYSSAESFASAEDQVADLRDFDDLSEALPELENLELYQAAVKQLENGIPYRTLRTEVVQCGSDAEFLCKLQCLRRAFQHALRAPDLRAWFQDAGRQVLTDLLLYADKEPKEFLVAYEEMVSWATDDANWPIIENELTSKGVKALTFYDIVLDYILLDAFEDLASPPSSVLAVVRNRWLSDGFKESALTTAVWSVIKAKRRYLQYPDGFMAHFYSISEHLLPVLVWGFLGPQERLRDVCETFQAEIVGFITDLFSFQKCRYTTVEDLATDIMQHARLRSANITDKLSERI

Summary

Pfam
PF13873   Myb_DNA-bind_5        + More
PF10265   Miga
Interpro
IPR028002   Myb_DNA-bind_5        + More
IPR019392   Miga       

Ontologies

Topology

Length:
577
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.67083
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00230
outside
1  -  577
 
 

Population Genetic Test Statistics

Pi
216.019599
Theta
165.855829
Tajima's D
1.182244
CLR
0.25939
CSRT
0.704314784260787
Interpretation
Uncertain
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