SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02164
Pre Gene Modal
BGIBMGA003145
Annotation
PREDICTED:_piezo-type_mechanosensitive_ion_channel_component_isoform_X5_[Bombyx_mori]
Full name
Piezo-type mechanosensitive ion channel component      
Location in the cell
PlasmaMembrane   Reliability : 3.512
 

Sequence

CDS
ATGCATAAATATTACTTTTCTATGCTGCTGGTGAGAGTTGTCTTGCCAGCTGGACTACTCTTAAGTATAGCATTACGACCTTTCGGGCTTTCGTTATTATATCTTCTCCTCTACCTGTTAGCGCCGCTGACGCAAATACCCGATCCTCAAACGTTCTCGGGATGGGGAGGAAAATATCTACTTCTGAATGTGGTCGTTTCATTCCTCCTGCTGCTATGTCACGCTGTATGGCACAGCGTCCTGGCGGCTTTTACACCATACGGCTCTCTTCTAAACGATTATCCTATAATACGTGATATCGGACATAATCTCGGTCTCGTGTCGTATGATGGCATAGAGGCCCTAATGGCCATCCATTATTTGGCACCAGAGCTTGTCATGACGGGATCATCATTGGTAGTGTACATTCTAGTAAGGAAATTATCAAATGTGCCCGATCCTGAACTACAGAAGAAAGATTTCAAACATCAACGGTATCCACTTCTAACAAGTGCAGGAAAATACTTGTGTTTATTCCTTATAATGTTCTCCGGGATAATGCGGCCTAGTGTTACATCGGGAATTTACTTTCTCGTGTTTATGGGTGCGGCTACTGCCTGGGCCGTTGGTCGTCCCTTGGAGAAGGGCTTTGCTGTTGTTGGAAGATGTCTCATGGCCATAATGGCAACACACATAATGGTTTTGCTTATCTACCAGTGCTCATGGCTAATAGAACTATATCCCCCTGAAATGGACTTTGCAAGGTACTTTGGCTTGACGAAATTGGTGATTATTACCGAAAAAAATCCAATGGGCTTCATTTATGAAGTGACAGACGATCATATGTGGGCAACTCTAGCTAGTCCACTGGTTATACTCGTCACGTATTATGTTCTAGCCATCGAGACACGAGAACTCTTCAAACCCAAGGAGGCATATTCATACATAAATTCAAAAGCACTACTACGTGGGAATGCCAGTGAGACCGCCCCTCTAATGCGGAACATAAGTCCGAATAAGCGTTGGTCAAGTATGCGCTCTGGATCCGTAACAAGACAGCTGCACCAAGATTCTACTGGGTCTGTGGTAGTACCGGATGAAGAATCTATAATAGAAGAAGAGGAACCCACTCTGTTGGATGACATTATCGCTGCGATAATTGATTTTTTCCAAGTCTTGATCAGGTCCTCATATATAGCGACAACAATAACGATGATGGCTTGGAGCATTATGTTTCATTCTTGGTTGACGTTCGTGTTCCTAATGTGGGCCAACATAGTGTGGCTGTGTCAGGACCAGAGATCGTTCATGTTGAAGACCAGTCCTATACTGGTGTGCTATGCAATGTTACTGCTCCTCGCGCAATACATTTACGGAATGAACCTGTTAGAGTCGGAATTGCCATCTAATATAACGGAAGTGAATCTCCGTCAGATCGGTGTGGGTCGTGCCGAGGGCGAGCCCTGTGTCCCGTTGTTGATAAAAGCGTTGTTCACGTGCATGTTCTGGGTGACGCTTCGGCAGCGAGTGCAAGAGATCAGACAGAGACGACAATCGGCGGTCATAACAGATATGGCCGCCCCCCTCCAGCTGACCGTCTCCACTGCTGCTAGCGTGCTAGAGGCACAGAGGGAGGAGGAGAGCCGGTCCCGCTTGCTGCGCGCGCTCGGCGAGTGGCTGCGGGCGATGTGCGCTCGCTACTGGATCTACGTCGTGGTCATCATGCTGTTCGTCATCGGCATCACCGGGGACCGTATGACCATCTTCCGGATCATATACATGTTCCTGTTCCTCGGATTTATTCTCATGTTTCAAATAAGTTGGTATTGGTGGCGCCGACTGATGTACGTGTTCTGGATAACAGTCATCATATATTCCATGATCAATCTAATTCTCATATACGTTTATCAATTCGACAATTTCTCGAAGACCATAGAAGAGTATCTCCTGATCAACGAGAGATTACAACACGATCTCGGCCTGGAACCGTATCACCCCGCCGACCTGTTCGTCAAACTGCTAACACCAACGTTGTTCTTGATAATAACGATAATGCAAGTACACTATTTCCACAAAGACTTCATGGCGCTCTCGGATCCTAAAACCAGAACCAACAGTGTAGTGAAAGAGCCGGAGTCCAGTCGACCGAGCCAAGCCGGCATTTCGACAATGAAAGATGACCTTCCTCAACTTCCTTTAGAAGAGGAGCAGCCGCCCTCTGTGGAAGGTAGCATGACGGAAGTTGAACATTCACTAGAGATGTCCTCGGTCAACAACGGGGCTAGAAGATCTATACACAGGAAGGCGTCGCGCAGTCGCTCGTACGCGCCCACGGTGACGGAGCGGGCGTCGAGCGGGCTCAGAGCGGCGCTGGCGGACGCGCTCATTGCCGGCCGCCGCGCGCTGCGACACTGGACCGACAAAGTCTTCGTGTACCTCGACATACACCTCATCAAGATCATATTTCTGTCCCTCATGCTGCTCTGCGTTATGAATGTATGCGCAATGCACGTTCCCATCATGATAATAATATCACCAGCTCTGTGGTTCAGTTCGCGGAAACAAAGAATATGCGTGTTATTCATATCAACTCTAATAAGCGTTTATTTTATGGCGAAAATGGTCTATCAGATTGATTATATCAAACATTCTTTGTTCGAAGTTAATTGTACCTCAGTTGAAGCTAACGAGACATCGACGAACATAGTCACGAACACGTACAACAACGCAGAATGGATCGGGTTCCACAAGGCGACACGTGAGAAACCTCTAGTGGTTCTACTCAAAGGCTATATAGGACTGATAGCTGTGTTTACGTTCTATTCCTTGGTCACCTATCGACAACAGACTATAAGGGAATTAGAGATGACGCCTAAAGAGAGAGAAAAAGTGATGTTCCCCGATATCACGCGCAAGGACGCCGACAAAGACTTGATCCACTGCATTAAATATTTAGTTAATTACGGATTTTACAAATTCGGAGTGGAGGTGACGCTGATCTGCCTGATAGGCGTGATCGGGTCCCGCATGGACGTGTACGCCGTGCTGTACGCGGCGTGGCTGCTGGCGCTGGTGGCGGCGCGGCGGGCGCGCCAGGCTCGGCTGTGGCCGGCCTTCGCCTGCTTCGTCACCTTCTTCGTGCCCGTGCAGTACATGGTGGCGGTCGGCTTCCTGCCGCAGCTGTGCGTGTCCTACCCTTGGAGTGGGGATTCCTCGCGCATGAAGCACATCCGCACATGGTTGTTCCTGCCGTACGCCGAGGAGCCCCCGCACGCCATTAAACTGATCTTCGATTACTTCCTGCTGCTGTTCGCGACGAGACAGCTCCGCGTGTTCCGGCTCGAGAAAGCGCACGGCGCGGAGTATCCCGGCGGCTCCAACAGCGAAGACATCGGCAAGGACTGGGAAACTCCGAACTTCGTCAACCCTGTTCCGGACTTCCTCGGTTGTGTGACTACGTGGCTGGACGTAGTGAAACGCATGGTGTTTTTAGGGATGCTGTGGGTTACTCTAGCCATAATGTTCATGACGGGCACAAACCGAGTCAATCTTTTCTCAATGGGATATCTAATCGGCTCGTTTATTTTCCTATGGCAAGGAACTGACTTTTATTTGAGACCGAAAGAAGCGATTTTACAGTGGTGGTCGTGGCTACTTCGGTACAACGTGTCCGTTGTAGTGGTGAAGTCGTTGCTGCAGATACCGGGCTGTCTGTTCATCTCGGTGCTGCAGGAGCACGCCTGCTGGCTGGTGCAGCTGCTGGGTATCGGCTGCGTCGATAAGTTCGCCGGCGGAAACATCGCCAGGTTCATCAAGATGAACTATGAAAAGGATCCTATATGTTCGGTACCTCAAGAAGACATAGGACTCGCTTGGGACGGAGTATGTTTTGCGTTTCTGATATTACAGCGCCGTCTGTTCCATAGCTATTATTTCTTTAGAGTCATCGATGAAAGTAAAGCCACCACAGTACTCGCGTCCAGAGGAGCCGAGTTGATCGAAGAATTACGACAAAAACAAATGTTGGTTCAAGAGGAACAAGAGAAAAAGATATTAGAGAAAATCAAAGTTAAAATGGAGAGGATCAAAGCAAATCAAAAGAAAATACAGGGTGTTATTAGTAAAGAACCACCTCACCACGATATCGGAATTCAATCAGAATTCGCGTTTAGGAGAAGAGTTTATTCGAAGAGGCACGAAGCTATTCGTTCCGGCGATTACTACATGTTTGATGAGTTCGATGACACCGACATCCATATGAAAGACGACGAATCCAGTTCCGACGAAGACGCGCCTAAAGAAATGGGATTCGGCAAGGTTCGAAGGAAACAATCACAAGGGGAAATTGTACAAGAGGGAGATGTGAAACCGGCTTTAGGTGAGAGAGAAGGCGATCCGCCCGGCTCTGACATAGATGACTACGCACCATTGCCCGAACAAGAGACTGCATTTGAAAAGCTGAAGCGTTTCATGGAAACCGCTTGGGCGTTCATTTCGAGCTTTTTGGTGTCCGTAACACGATACCTGATGCGATACTCGCGCGATTATCGATATGTCTCACGAACTCTATCCGTCGAGAAGAAGATCCTAAAGGAAAAAGAAGGTTTCGGCATCGGACTGAGGGAGGGCTCGCAGATGATCTGGGAACCACTACCCGAGGCGTTGATACATCACAAGGATGTGACAACCCTAGAGGAGCAGGACGATTCTATGTTTAAACAGGACAGATCTCCATTTTTACATTTGACCTACGCCTTGTGGTACGCGGTGTTGGCGCACACTGACATTGTGTGCTATATTATGGTGTTTATAAACCAGATACAATCCGCTACGATTCTATCTATACCGTTACCACTAATGGTGTTCCTGTGGGGCACACTGACAATACCGAGACCAACGAAGACCTTCTGGGTCACGCTTATCGCATATACTGAGGTGATAGTGTTGATAAAAAGTATGTTCCAATTCGAAATATTGCCATGGAATCGCGATAATGTACCAGCGAACGTTCCATTCAGTACTGCACGCGTTATTGGTATTGAGAGGAAGCCGAACTACGCCATCTACGATTTATTGTTGCTTTTGATTATATTCCTGCACAGATTCATGCTGAAATCACTGGGACTGTGGAAGGAATCGTCTCCAGAAATAGAACTCCGAGAGGACATGGAGTACGCCCTGACGCCCGAAGACACGCAGCTCGTGGTGGAGGGCCGGGCCGCCGAAGTGGCACGCAAATTCGTGCAGCTGCACGACCGAAGCGGACCACGAGAAGATGAGGCTGATAATGGCTCAAGCAGGAGTATCGGAGAGGAGGTACGCCTGCAAGAACAGCGAGACTATGAAGAAGCGGGACCCTCGAAACCAATCGACGATGATCATTACAATGTAAACGACGATCAAGAGCCCATTATTGCTGTTACAACAACTATGGAAGACACGTACAAGCATTACCCGAAAGTCATGCTTTTGTCAGTGAAGCGGTACTTGCGTCCGACGCAGCGTTTCTTCAAGCGGATGTTGACGCCGGGCGCGCGCGTCACCGCCGACGTGTATGCGTACATGTTCCTTTGCGACTTCTTCAATTTCCTCGTCGTCATATTCGGATTTGCCGCTTTTGGGACCCACCAGGGCGATGGCGGCGTTCAAGCGTACATAGAAGAGAACAAAGTGCCCATTCCGTTTCTAATAATGTTGATCCTGCAATTCATATTGATCATCATCGACCGAGCGTTGTATTTACGAAAGTACATGCTCGGCAAGATACTGTTCCAATACGCGCTCATCATCGGCGTTCACATCTGGATGTTCTTTGTGCTGCCCTTCATCACGGAGAGGTCGTTCAACACATTACCGCCCCCGCCAATGTGGTACATGATGAAATGCATCTACCTGCTGCTGTCGGCCTATCAGATACGCTGCGGGTACCCGAGACGTATCATCGGGAACTTCCTCTGCAAGTCCTACCGATTCCTCAACATGATATGCTTTAGAGGATTTATGGCGGTTCCATTTGTATTCGAGCTGCGTACTTTAATGGATTGGATCTGGACTGATACTTCAATGACTCTAATGGACTGGCTGAAAATGGAGGATATATTCGCTAGTGTTTTCCTGTTAAAGTGTTCTCGCTACGTAGAAGATGAATTTCCCCAACCACGAGGCGTGAAGAAGTCCAGCACATCCAAGTATCTATTGGGAGGCTGTGTACTGGCATTCGTTATTGCAATAATCTGGTTCCCGCTCGTTTTCTTCGCATTTGGAAATTCTGTTGGCCAACCGAACCCGCCGACTGACGTCACAGTCAAAATACGAATCGGTCCGTACCTCCCCGTTTACCAGATGTCAGCACAATCGCACAACATCGAAGGATTCACCGAACAAGACTACACCCAGCTGAGCAACATGTACGGACGCAACCGAGCGGCGCAGACGTTCCTGTCGAACTACATGTACAACGACATCGCCGTCATCTACATCAACCCTATATCGACCATGAACTGGGTCATCTCGCCGCCTGAACTCAAACGACTCGAAATGGAGGCTTTATCCAATGCGTCATTACAAGTGAAATTCACATACGTGATAACTCACCCGACGAACGCGGTCCCGAGCCCGCCAACCCTGGAGGACCAGCGCGAGGTCACGCTGCCGGCCTTCGTGGAGGGACGCGCCAACCCCGACCGCGGCCTGCTCACCGACATGCTCAACGGCACCGCGCCCGCCGACGCCTGGTTCAACGTGTCGACTTTGTTCCCGAAGTTCATCAAGGTATTCAATAAAGGCACAACGAAACCAGCGTCTCAACTCATGCCGCCCGACGATGACCCCGATGCCCGGCAGTACCGAGACGTGCAGCTCCGCTTAGAGAGACAAGACTCCAACATGTACTGGCGTGTACGCGAGAGATGCGCCACGGGTGACTCGTTAGCTTCGCTTCCGTTGAACAACTGCGACATGCTGGTCATGTACACCTTCAACGATAAACTCTTCCCAGAAACGTTAAACTTCATATCCGGAAGCGGTATAATCGGGCTGTACACGACGTTCGTGTTCCTCGCGTCTCGGATACTGCGCGGCTTCTTCTCCGGCATCTACACCAAGATCATGTTCGACGACCTGCCCAACGTGGACCGCGTGCTGCAGCTCTGCCTCGACATTTATTTGGTTCGGGAAGCTCTAGAGCTGTCTCTGGAAGAGGACTTATTTGCGAAACTGGTGTTCCTGTATCGGTCGCCGGAGACTATGATCAAGTGGAGTCGGCCCAAGGAGGAGCCCGAGGAGCAGCGGGCGCTCCCGCCCTCGCGCTCCGAGAGGAGTTGA
Protein
MHKYYFSMLLVRVVLPAGLLLSIALRPFGLSLLYLLLYLLAPLTQIPDPQTFSGWGGKYLLLNVVVSFLLLLCHAVWHSVLAAFTPYGSLLNDYPIIRDIGHNLGLVSYDGIEALMAIHYLAPELVMTGSSLVVYILVRKLSNVPDPELQKKDFKHQRYPLLTSAGKYLCLFLIMFSGIMRPSVTSGIYFLVFMGAATAWAVGRPLEKGFAVVGRCLMAIMATHIMVLLIYQCSWLIELYPPEMDFARYFGLTKLVIITEKNPMGFIYEVTDDHMWATLASPLVILVTYYVLAIETRELFKPKEAYSYINSKALLRGNASETAPLMRNISPNKRWSSMRSGSVTRQLHQDSTGSVVVPDEESIIEEEEPTLLDDIIAAIIDFFQVLIRSSYIATTITMMAWSIMFHSWLTFVFLMWANIVWLCQDQRSFMLKTSPILVCYAMLLLLAQYIYGMNLLESELPSNITEVNLRQIGVGRAEGEPCVPLLIKALFTCMFWVTLRQRVQEIRQRRQSAVITDMAAPLQLTVSTAASVLEAQREEESRSRLLRALGEWLRAMCARYWIYVVVIMLFVIGITGDRMTIFRIIYMFLFLGFILMFQISWYWWRRLMYVFWITVIIYSMINLILIYVYQFDNFSKTIEEYLLINERLQHDLGLEPYHPADLFVKLLTPTLFLIITIMQVHYFHKDFMALSDPKTRTNSVVKEPESSRPSQAGISTMKDDLPQLPLEEEQPPSVEGSMTEVEHSLEMSSVNNGARRSIHRKASRSRSYAPTVTERASSGLRAALADALIAGRRALRHWTDKVFVYLDIHLIKIIFLSLMLLCVMNVCAMHVPIMIIISPALWFSSRKQRICVLFISTLISVYFMAKMVYQIDYIKHSLFEVNCTSVEANETSTNIVTNTYNNAEWIGFHKATREKPLVVLLKGYIGLIAVFTFYSLVTYRQQTIRELEMTPKEREKVMFPDITRKDADKDLIHCIKYLVNYGFYKFGVEVTLICLIGVIGSRMDVYAVLYAAWLLALVAARRARQARLWPAFACFVTFFVPVQYMVAVGFLPQLCVSYPWSGDSSRMKHIRTWLFLPYAEEPPHAIKLIFDYFLLLFATRQLRVFRLEKAHGAEYPGGSNSEDIGKDWETPNFVNPVPDFLGCVTTWLDVVKRMVFLGMLWVTLAIMFMTGTNRVNLFSMGYLIGSFIFLWQGTDFYLRPKEAILQWWSWLLRYNVSVVVVKSLLQIPGCLFISVLQEHACWLVQLLGIGCVDKFAGGNIARFIKMNYEKDPICSVPQEDIGLAWDGVCFAFLILQRRLFHSYYFFRVIDESKATTVLASRGAELIEELRQKQMLVQEEQEKKILEKIKVKMERIKANQKKIQGVISKEPPHHDIGIQSEFAFRRRVYSKRHEAIRSGDYYMFDEFDDTDIHMKDDESSSDEDAPKEMGFGKVRRKQSQGEIVQEGDVKPALGEREGDPPGSDIDDYAPLPEQETAFEKLKRFMETAWAFISSFLVSVTRYLMRYSRDYRYVSRTLSVEKKILKEKEGFGIGLREGSQMIWEPLPEALIHHKDVTTLEEQDDSMFKQDRSPFLHLTYALWYAVLAHTDIVCYIMVFINQIQSATILSIPLPLMVFLWGTLTIPRPTKTFWVTLIAYTEVIVLIKSMFQFEILPWNRDNVPANVPFSTARVIGIERKPNYAIYDLLLLLIIFLHRFMLKSLGLWKESSPEIELREDMEYALTPEDTQLVVEGRAAEVARKFVQLHDRSGPREDEADNGSSRSIGEEVRLQEQRDYEEAGPSKPIDDDHYNVNDDQEPIIAVTTTMEDTYKHYPKVMLLSVKRYLRPTQRFFKRMLTPGARVTADVYAYMFLCDFFNFLVVIFGFAAFGTHQGDGGVQAYIEENKVPIPFLIMLILQFILIIIDRALYLRKYMLGKILFQYALIIGVHIWMFFVLPFITERSFNTLPPPPMWYMMKCIYLLLSAYQIRCGYPRRIIGNFLCKSYRFLNMICFRGFMAVPFVFELRTLMDWIWTDTSMTLMDWLKMEDIFASVFLLKCSRYVEDEFPQPRGVKKSSTSKYLLGGCVLAFVIAIIWFPLVFFAFGNSVGQPNPPTDVTVKIRIGPYLPVYQMSAQSHNIEGFTEQDYTQLSNMYGRNRAAQTFLSNYMYNDIAVIYINPISTMNWVISPPELKRLEMEALSNASLQVKFTYVITHPTNAVPSPPTLEDQREVTLPAFVEGRANPDRGLLTDMLNGTAPADAWFNVSTLFPKFIKVFNKGTTKPASQLMPPDDDPDARQYRDVQLRLERQDSNMYWRVRERCATGDSLASLPLNNCDMLVMYTFNDKLFPETLNFISGSGIIGLYTTFVFLASRILRGFFSGIYTKIMFDDLPNVDRVLQLCLDIYLVREALELSLEEDLFAKLVFLYRSPETMIKWSRPKEEPEEQRALPPSRSERS

Summary

Similarity
Belongs to the PIEZO (TC 1.A.75) family.
Pfam
PF15917   PIEZO        + More
PF12166   Piezo_RRas_bdg
Interpro
IPR031334   Piezo_RRas-bd_dom        + More
IPR031805   Piezo_dom       
IPR027272   Piezo       
PDB
6BPZ     E-value=5.41432e-144,     Score=1317

Ontologies

Topology

Subcellular location
Membrane  
Length:
2433
Number of predicted TMHs:
33
Exp number of AAs in TMHs:
755.33252
Exp number, first 60 AAs:
26.74006
Total prob of N-in:
0.14672
POSSIBLE N-term signal
sequence
outside
1  -  14
TMhelix
15  -  37
inside
38  -  58
TMhelix
59  -  81
outside
82  -  115
TMhelix
116  -  138
inside
139  -  157
TMhelix
158  -  180
outside
181  -  183
TMhelix
184  -  203
inside
204  -  209
TMhelix
210  -  232
outside
233  -  273
TMhelix
274  -  293
inside
294  -  400
TMhelix
401  -  423
outside
424  -  432
TMhelix
433  -  455
inside
456  -  556
TMhelix
557  -  576
outside
577  -  579
TMhelix
580  -  602
inside
603  -  608
TMhelix
609  -  631
outside
632  -  661
TMhelix
662  -  684
inside
685  -  801
TMhelix
802  -  824
outside
825  -  827
TMhelix
828  -  845
inside
846  -  851
TMhelix
852  -  874
outside
875  -  916
TMhelix
917  -  939
inside
940  -  976
TMhelix
977  -  999
outside
1000  -  1002
TMhelix
1003  -  1020
inside
1021  -  1031
TMhelix
1032  -  1054
outside
1055  -  1145
TMhelix
1146  -  1168
inside
1169  -  1174
TMhelix
1175  -  1194
outside
1195  -  1485
TMhelix
1486  -  1503
inside
1504  -  1573
TMhelix
1574  -  1596
outside
1597  -  1599
TMhelix
1600  -  1622
inside
1623  -  1628
TMhelix
1629  -  1651
outside
1652  -  1678
TMhelix
1679  -  1697
inside
1698  -  1843
TMhelix
1844  -  1866
outside
1867  -  1885
TMhelix
1886  -  1908
inside
1909  -  1914
TMhelix
1915  -  1937
outside
1938  -  1946
TMhelix
1947  -  1969
inside
1970  -  2056
TMhelix
2057  -  2079
outside
2080  -  2328
TMhelix
2329  -  2351
inside
2352  -  2433
 
 

Population Genetic Test Statistics

Pi
235.809733
Theta
176.416502
Tajima's D
0.91501
CLR
0.422589
CSRT
0.63726813659317
Interpretation
Uncertain
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