Gene

KWMTBOMO02159

Pre Gene Modal

BGIBMGA003147

Annotation

PREDICTED:_uncharacterized_protein_LOC106118175_[Papilio_xuthus]

Location

Bomo_Chr4(-):12977854-12986756      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.138

CDS

ATGACGACCACTTCGTTATCTCTCGAGGTCCTGGCACTTTTGTTCCTGACCCTAATACCTTGGCCGGGGCCTTCAGTGTTCAAGATCAGCTGCTCTCGTGACAACTCCAAAATCGTAAGAAAAGTCATACAGAACAAATGGCTTCCCGTCTTGGAGAGATTCCAGGTAAAACTACCATTAGAATGTCCATTCCACCCCGCGCGAGACATATTCGCGCCTCAGCACGCAGCCAAGATGCAACACCGACCATCGCAATGGACGTGCGCTTTCTGTGGAAAATCCTTTTACGAAGAACGACATCTAGACGCACACTTTGACCACCGACACAAAAATCAGATCAACAAGGCAGAAGACGCAGTTTGTCTAGCTGACTACTGTGATATTTTGCGGTGTCAAGTCTTGGTCGCACACGGACTACTAAACGGTGGCGACGGACCTGGCACCGACATTGAGGTGTGGCAGGACGTGGAATCCATAAAGAAGGCCTTAGCACCGGCAGCAACCCGGAGTGTGGCGCGAGTGGCCCCACGCCGTAGACATCGACCGCGTTCAACGCCTCTCCCTGTACCTGACTGCCCCAAGACTGACCTTGAAAATGATGAGCCAGAATCCGATGAAAAAAAGACGGAAGACAGCGAAACGGATGTGAATCAAACCGCTAAATTATGTGACGCAGACACCGTAGAGTCCTCTCTTCCACCGGACAGCAGACAGAAACGGTTGGCAGACTTGCAGGCCGAGCGCGCGGCTTGCGATCCCACAAGACTTCAAATATTAAAGATACGATGTGAGAAAATAGTTCATTCTTGTATAGCGACGTTGTTATTAAATCTGACTCAACATCAGTTTACTGAATTGGAAGAAGAGATGCAACGCGCAGTGTGTTGGTACTTGAGCTGTGACCGGTACTGGGAGGACACCGCGCCAACGGCTCGAGCGTTCCCTTGGCCGCTACTGTTGGCGCTCGCGACAGGCCTCGCTTTGGCTTTGTGTATGTGTTACTACATCATCTGGATAGTGTTCGATTCCGAGGAGGGTAGTGTGGCGGGAAGCGCCTCCGTTTCTATGACGACGCATTCGTCGCCGACTCGGGGGGAGCGGATGGGGACAGAAGACGGCATGCTGGATGATCCCGACCATGACGACCACTACATATACGTTACTTACCCACCTGAACTAAAGCGGAGGCTACTTGAGAGCTGCTACAATAGAACGACGCGCCTTTGA

Protein

MTTTSLSLEVLALLFLTLIPWPGPSVFKISCSRDNSKIVRKVIQNKWLPVLERFQVKLPLECPFHPARDIFAPQHAAKMQHRPSQWTCAFCGKSFYEERHLDAHFDHRHKNQINKAEDAVCLADYCDILRCQVLVAHGLLNGGDGPGTDIEVWQDVESIKKALAPAATRSVARVAPRRRHRPRSTPLPVPDCPKTDLENDEPESDEKKTEDSETDVNQTAKLCDADTVESSLPPDSRQKRLADLQAERAACDPTRLQILKIRCEKIVHSCIATLLLNLTQHQFTELEEEMQRAVCWYLSCDRYWEDTAPTARAFPWPLLLALATGLALALCMCYYIIWIVFDSEEGSVAGSASVSMTTHSSPTRGERMGTEDGMLDDPDHDDHYIYVTYPPELKRRLLESCYNRTTRL

Uniprot

A0A2A4JFM9   A0A2H1WK11   A0A0N1I6T6   A0A212F714   A0A194PMY9   D6WKZ3   + More
N6TEC2   A0A1W4WKT2   A0A1B0DB74   A0A0A9WY33   A0A146KT90   E0VY63   A0A2P8Z454   A0A023EWL9   A0A0V0GD09   A0A1B6DHM1   A0A0P4VR48   A0A1B0CHH6   B0WE50   A0A1B6JST8   A0A1W4W9M1   A0A182QU16   A0A1B6KFD7   A0A0C9RKH7   A0A067R9V8   A0A1J1IBU8   A0A0A9X3L8   A0A1B6D3X7   T1HAU2   A0A0R1DQ04   A0A0Q5WHV7   M9PAY9   A0A0J9QTD9   T1GQC6   A0A1B6C3F9   W8CBB0   A0A154P5E0   A0A2J7RPG3   A0A1Y1KF16   A0A0K8WBU0   A0A0T6AV26  

Pubmed

26354079    22118469    18362917    19820115    23537049    25401762    + More
26823975    20566863    29403074    25474469    27129103    24845553    17994087    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    22936249    24495485    28004739   

EMBL

NWSH01001661    PCG70508.1    ODYU01009115    SOQ53306.1    KQ460709    KPJ12725.1    + More
AGBW02009947    OWR49517.1    KQ459598    KPI94682.1    KQ971343    EFA03538.2    APGK01032734    KB740848    KB631797    ENN78714.1    ERL86213.1    AJVK01004642    AJVK01004643    GBHO01030217    JAG13387.1    GDHC01019470    JAP99158.1    DS235843    EEB18319.1    PYGN01000204    PSN51282.1    GBBI01004982    JAC13730.1    GECL01000368    JAP05756.1    GEDC01012097    JAS25201.1    GDKW01001097    JAI55498.1    AJWK01012386    DS231904    EDS45226.1    GECU01005418    JAT02289.1    AXCN02000805    GEBQ01029799    JAT10178.1    GBYB01007401    JAG77168.1    KK852829    KDR15358.1    CVRI01000044    CRK96462.1    GBHO01030216    JAG13388.1    GEDC01016955    JAS20343.1    ACPB03014852    CM000157    KRJ97041.1    CH954177    KQS69929.1    AE014134    AGB92363.1    CM002910    KMY87321.1    CAQQ02042342    CAQQ02042343    CAQQ02042344    GEDC01029271    JAS08027.1    GAMC01004991    JAC01565.1    KQ434822    KZC07146.1    NEVH01001358    PNF42726.1    GEZM01090039    JAV57377.1    GDHF01003656    JAI48658.1    LJIG01022749    KRT78918.1   

Proteomes

UP000218220    UP000053240    UP000007151    UP000053268    UP000007266    UP000019118    + More
UP000030742    UP000192223    UP000092462    UP000009046    UP000245037    UP000092461    UP000002320    UP000075886    UP000027135    UP000183832    UP000015103    UP000002282    UP000008711    UP000000803    UP000015102    UP000076502    UP000235965   

PRIDE

M9PAY9   

Interpro

IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf       

SUPFAM

SSF57667   SSF57667       

ProteinModelPortal

A0A2A4JFM9   A0A2H1WK11   A0A0N1I6T6   A0A212F714   A0A194PMY9   D6WKZ3   + More
N6TEC2   A0A1W4WKT2   A0A1B0DB74   A0A0A9WY33   A0A146KT90   E0VY63   A0A2P8Z454   A0A023EWL9   A0A0V0GD09   A0A1B6DHM1   A0A0P4VR48   A0A1B0CHH6   B0WE50   A0A1B6JST8   A0A1W4W9M1   A0A182QU16   A0A1B6KFD7   A0A0C9RKH7   A0A067R9V8   A0A1J1IBU8   A0A0A9X3L8   A0A1B6D3X7   T1HAU2   A0A0R1DQ04   A0A0Q5WHV7   M9PAY9   A0A0J9QTD9   T1GQC6   A0A1B6C3F9   W8CBB0   A0A154P5E0   A0A2J7RPG3   A0A1Y1KF16   A0A0K8WBU0   A0A0T6AV26  

KEGG

101740743    no KO assigned | (RefSeq) uncharacterized LOC101740743

GO

GO:0003676   GO:0016021   GO:0046872   GO:0007264   GO:0007165   GO:0005694   GO:0003824   GO:0006520   GO:0008483   GO:0006418   GO:0016507   GO:0048384  

SignalP

Position:   1 - 28,         Likelihood:  0.718467

 

 

Length:

408

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

41.98237

Exp number, first 60 AAs:

18.96784

Total prob of N-in:

0.12781

POSSIBLE N-term signal

sequence

outside

1  -  9

TMhelix

10  -  32

inside

33  -  317

TMhelix

318  -  340

outside

341  -  408

 

 

Pi

175.969787

Theta

187.533669

Tajima's D

0.305441

CLR

0.850774

CSRT

0.455677216139193

Interpretation

Uncertain