Silkworm Genome Informatics Database

Gene

KWMTBOMO02157

Pre Gene Modal

BGIBMGA003014

Annotation

Cytochrome_b5_[Operophtera_brumata]

Location

Bomo_Chr4(+):12954617-12956436 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.769

CDS

ATGACGACGGTACATACTACCAACGAAGTGAATTTGTCAGCACCCACGCCAAATCAGGACGCAGATTTGGATCTAATGGCGCTAACTATGGCAGCCTTACGCTTTGTCAATCCTTGGTCAGTTAACACGGAGCAGAAACAGTGGACTGAAGTGGTACCAGGCTCACCTGAAGCCAAGGACCGCACAATTACTTTGGCAGAAGTTGCCCACCATGACACCCCCGATGATTGTTGGATAGTTATTTATGATCGTGTCTATGATATATCGACATTCTTAGACGAGCATCCTGGCGGTGGCGATATAATGTTGGAGTACGCAGGCCGAGACGCAAGCACGGCTTTCAGGAGTTCTGGGCACTCTCGCATGGCTGTTAAGGCTCTAGATCGATTTCTAGTCGGAGAACTGCCCCTACAGGAACGCTTGTACCGACGCCCGGGTGGTATTAAGCTTAGCGATATACCCGAATGA

Protein

MTTVHTTNEVNLSAPTPNQDADLDLMALTMAALRFVNPWSVNTEQKQWTEVVPGSPEAKDRTITLAEVAHHDTPDDCWIVIYDRVYDISTFLDEHPGGGDIMLEYAGRDASTAFRSSGHSRMAVKALDRFLVGELPLQERLYRRPGGIKLSDIPE

Similarity

Belongs to the cytochrome b5 family.

Uniprot

H9J0H7 A0A2H1X2V9 A0A0L7LD40 A0A2A4JGG6 A0A212F713 A0A0N1IDN1 + More
A0A194PMN0 S4PNR2 A0A1W4WYH6 A0A154PM82 B3MMG4 A0A1I8Q3S5

Pubmed

19121390 26227816 22118469 26354079 23622113 17994087 + More

EMBL

BABH01010407 ODYU01012569 SOQ58974.1 JTDY01001595 KOB73428.1 NWSH01001661 + More
PCG70503.1 AGBW02009947 OWR49520.1 KQ460709 KPJ12722.1 KQ459598 KPI94686.1 GAIX01002840 JAA89720.1 KQ434978 KZC12969.1 CH902620 EDV30910.1

Proteomes

UP000005204 UP000037510 UP000218220 UP000007151 UP000053240 UP000053268 + More
UP000192223 UP000076502 UP000007801 UP000095300

PRIDE

H9J0H7

Pfam

PF00173 Cyt-b5

Interpro

IPR018506   Cyt_B5_heme-BS        + More
IPR001199   Cyt_B5-like_heme/steroid-bd
IPR036400   Cyt_B5-like_heme/steroid_sf

SUPFAM

SSF55856 SSF55856

Gene 3D

3.10.120.10

ProteinModelPortal

H9J0H7 A0A2H1X2V9 A0A0L7LD40 A0A2A4JGG6 A0A212F713 A0A0N1IDN1 + More
A0A194PMN0 S4PNR2 A0A1W4WYH6 A0A154PM82 B3MMG4 A0A1I8Q3S5

PDB

2IBJ E-value=3.54486e-15, Score=193

KEGG

101746637 K23490 cytochrome b5 | (RefSeq) cytochrome b5

GO

GO:0046872 GO:0020037 GO:0007264 GO:0007165 GO:0005694 GO:0003824 GO:0006520 GO:0008483 GO:0006418 GO:0016507 GO:0048384

Length:

155

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01987

Exp number, first 60 AAs:

0.01987

Total prob of N-in:

0.38234

outside

1 - 155

Pi

208.600823

Theta

196.765569

Tajima's D

0.26145

CLR

0

CSRT

0.447977601119944

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics