Gene

KWMTBOMO02156

Pre Gene Modal

BGIBMGA003013

Annotation

PREDICTED:_whirlin_[Bombyx_mori]

Location

Bomo_Chr4(+):12916217-12921411      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.972 Mitochondrial   Reliability : 1.41

CDS

ATGTCTCGGAGCTTCGACATGAAGGAGGAAGGCAATGCTCTGATTGATGATCGAGGAGGAATTCGAAGGCATCAGTCAATGCAGCGTCTACAGCACGGAGATCAGCAGACCGATGAAAGTCGAGCAGCTAGGGTCGTATCGGACCACCACGGAAACTTACACATCACCGTTAAAAAGACTAAACCAATACTCGGCATAGCGATAGAAGGCGGCGCTAACACCAAACATCCACTACCTCGAATTATAAATATACATGAACATGGAGCCGCATACGAGGCTGGAGGACTAGAGGTGGGCCAGCTGATTTTGGCCGTAGATGGACACCGCGTGGAGGGCATGCAACATCAGGACGTAGCGCGACTTATTGCAGAATCATTCGCGCAAAGAGATAAACCAGAGATCGAGTTCCTCGTCGTGGAAGCAAAAAAGTCGAACTTGGAACCGAAGCCGACAGCTTTAATATTTCTGGAGGCCTAA

Protein

MSRSFDMKEEGNALIDDRGGIRRHQSMQRLQHGDQQTDESRAARVVSDHHGNLHITVKKTKPILGIAIEGGANTKHPLPRIINIHEHGAAYEAGGLEVGQLILAVDGHRVEGMQHQDVARLIAESFAQRDKPEIEFLVVEAKKSNLEPKPTALIFLEA

Uniprot

A0A0N0PC23   A0A194PMZ4   H9J0H6   A0A2A4JGI7   A0A212F704   A0A2H1WXP4   + More
A0A1B0GNZ2   A0A0L0C3L3   A0A1Y1K1C3   A0A1B0G210   A0A139WKZ3   A0A1A9ZMV8   B0X0R6   Q17MX1   A0A0J9RW62   B4J3D1   A0A1W4U7A5   A0A2J7PDZ9   A0A1W4UIE7   A0A1W4UK57   A0A1W4U6P1   A0A1W4UIB6   A0A1B6M3N8   A0A1I8NJF2   A0A0J9UKN9   B7Z048   A0A1W4U6N5   A0A1W4UK52   A0A1W4UID3   A0A1W4U796   A0A0J9RV64   A0A0J9UKP3   U5EDC1   A0A0J9RUN6   M9PFJ0   Q9VU98   A0A0J9RUW8   A0A0R3P3X9   A0A1A9VMP5   A0A1W4WYG5   B4KYV7   M9PF56   A0A0R1DXL9   A0A1I8QAK6   W8AIZ5   W8B777   B4LDL8   A0A0P9AKR2   A0A0Q9X1S5   A0A182J8I0   A0A2M4CG24   Q7PMI9   A0A067R1S1   E0VND8   N6T5P9   A0A1Y1K428   A0A3B0JSX1   A0A151HZG3   A0A151WZZ6   E9J389   A0A151IL97   K7IQT4   A0A310SIE0   A0A151J8A0   A0A182GTZ0   A0A088A1F7   T1DRZ7   A0A182Q5Y3   A0A0L7R320   A0A182KV88   A0A0N0BHL2   A0A182I5T1   A0A182V8Q4   E2C844   A0A084WUH7   W5JEL6   A0A182FVX3   A0A182X0J5   A0A182LUM4   A0A182REK3   A0A182NV62   A0A182YSR4   A0A182KFP6   A0A182P9U7   A0A182W9L1   A0A182T2W8   A0A026X3P9   A0A1B6E6E7   U4TT61   A0A336LQM3   A0A195FUZ2   V9IDY8   A0A0J7K5G6   E2AQT2   A0A023F5U3   V9IBM0   A0A1A9Y9U1   A0A1B0BKA9   A0A1A9WCS2   A0A0A9Z0Z5  

Pubmed

26354079    19121390    22118469    26108605    28004739    18362917    + More
19820115    17510324    22936249    17994087    25315136    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    15632085    17550304    24495485    12364791    24845553    20566863    23537049    21282665    20075255    26483478    20966253    20798317    24438588    20920257    23761445    25244985    24508170    25474469    25401762   

EMBL

KQ460709    KPJ12720.1    KQ459598    KPI94687.1    BABH01010409    NWSH01001661    + More
PCG70502.1    AGBW02009947    OWR49521.1    ODYU01011429    SOQ57164.1    AJVK01014763    JRES01000945    KNC26933.1    GEZM01095944    JAV55243.1    CCAG010020724    CCAG010020725    KQ971326    KYB28491.1    DS232244    EDS38308.1    CH477203    EAT48031.1    CM002912    KMY99469.1    CH916366    EDV97230.1    NEVH01026120    PNF14561.1    GEBQ01009473    JAT30504.1    KMY99470.1    AE014296    ACL83302.1    KMY99477.1    KMY99475.1    GANO01004828    JAB55043.1    KMY99471.1    AGB94504.1    AAF49791.3    KMY99478.1    CH379069    KRT07874.1    CH933809    EDW18849.2    AGB94503.1    CM000159    KRK01835.1    GAMC01020868    JAB85687.1    GAMC01020871    JAB85684.1    CH940647    EDW69979.2    CH902618    KPU78457.1    CH964095    KRF99014.1    GGFL01000007    MBW64185.1    AAAB01008979    EAA13766.3    KK852770    KDR16921.1    DS235336    EEB14894.1    APGK01051366    APGK01051367    KB741190    ENN72998.1    GEZM01095946    JAV55241.1    OUUW01000002    SPP76456.1    KQ976699    KYM77431.1    KQ982635    KYQ53337.1    GL768059    EFZ12707.1    KQ977121    KYN05527.1    KQ760945    OAD58594.1    KQ979548    KYN21083.1    JXUM01018380    KQ560511    KXJ82051.1    GAMD01000410    JAB01181.1    AXCN02001807    KQ414664    KOC65171.1    KQ435748    KOX76431.1    APCN01003496    GL453538    EFN75897.1    ATLV01027085    KE525423    KFB53871.1    ADMH02001614    ETN61788.1    AXCM01016381    KK107019    EZA62708.1    GEDC01003829    JAS33469.1    KB630568    KB630894    ERL83686.1    ERL83932.1    UFQT01000117    SSX20374.1    KQ981241    KYN44273.1    JR039096    AEY58529.1    LBMM01013608    KMQ85562.1    GL441834    EFN64194.1    GBBI01002160    JAC16552.1    JR039095    AEY58528.1    JXJN01015863    GBHO01004652    JAG38952.1   

Proteomes

UP000053240    UP000053268    UP000005204    UP000218220    UP000007151    UP000092462    + More
UP000037069    UP000092444    UP000007266    UP000092445    UP000002320    UP000008820    UP000001070    UP000192221    UP000235965    UP000095301    UP000000803    UP000001819    UP000078200    UP000192223    UP000009192    UP000002282    UP000095300    UP000008792    UP000007801    UP000007798    UP000075880    UP000007062    UP000027135    UP000009046    UP000019118    UP000268350    UP000078540    UP000075809    UP000078542    UP000002358    UP000078492    UP000069940    UP000249989    UP000005203    UP000075886    UP000053825    UP000075882    UP000053105    UP000075840    UP000075903    UP000008237    UP000030765    UP000000673    UP000069272    UP000076407    UP000075883    UP000075900    UP000075884    UP000076408    UP000075881    UP000075885    UP000075920    UP000075901    UP000053097    UP000030742    UP000078541    UP000036403    UP000000311    UP000092443    UP000092460    UP000091820   

PRIDE

H9J0H6    B7Z048    Q9VU98    M9PF56   

Pfam

PF17820   PDZ_6        + More
PF00595   PDZ

Interpro

IPR041489   PDZ_6        + More
IPR001478   PDZ       
IPR036034   PDZ_sf       

SUPFAM

SSF50156   SSF50156       

ProteinModelPortal

A0A0N0PC23   A0A194PMZ4   H9J0H6   A0A2A4JGI7   A0A212F704   A0A2H1WXP4   + More
A0A1B0GNZ2   A0A0L0C3L3   A0A1Y1K1C3   A0A1B0G210   A0A139WKZ3   A0A1A9ZMV8   B0X0R6   Q17MX1   A0A0J9RW62   B4J3D1   A0A1W4U7A5   A0A2J7PDZ9   A0A1W4UIE7   A0A1W4UK57   A0A1W4U6P1   A0A1W4UIB6   A0A1B6M3N8   A0A1I8NJF2   A0A0J9UKN9   B7Z048   A0A1W4U6N5   A0A1W4UK52   A0A1W4UID3   A0A1W4U796   A0A0J9RV64   A0A0J9UKP3   U5EDC1   A0A0J9RUN6   M9PFJ0   Q9VU98   A0A0J9RUW8   A0A0R3P3X9   A0A1A9VMP5   A0A1W4WYG5   B4KYV7   M9PF56   A0A0R1DXL9   A0A1I8QAK6   W8AIZ5   W8B777   B4LDL8   A0A0P9AKR2   A0A0Q9X1S5   A0A182J8I0   A0A2M4CG24   Q7PMI9   A0A067R1S1   E0VND8   N6T5P9   A0A1Y1K428   A0A3B0JSX1   A0A151HZG3   A0A151WZZ6   E9J389   A0A151IL97   K7IQT4   A0A310SIE0   A0A151J8A0   A0A182GTZ0   A0A088A1F7   T1DRZ7   A0A182Q5Y3   A0A0L7R320   A0A182KV88   A0A0N0BHL2   A0A182I5T1   A0A182V8Q4   E2C844   A0A084WUH7   W5JEL6   A0A182FVX3   A0A182X0J5   A0A182LUM4   A0A182REK3   A0A182NV62   A0A182YSR4   A0A182KFP6   A0A182P9U7   A0A182W9L1   A0A182T2W8   A0A026X3P9   A0A1B6E6E7   U4TT61   A0A336LQM3   A0A195FUZ2   V9IDY8   A0A0J7K5G6   E2AQT2   A0A023F5U3   V9IBM0   A0A1A9Y9U1   A0A1B0BKA9   A0A1A9WCS2   A0A0A9Z0Z5  

PDB

1UFX     E-value=1.46765e-18,     Score=222

KEGG

101740884    K21879 whirlin | (RefSeq) whirlin

GO

GO:0007605   GO:0050953   GO:0032426   GO:0002142   GO:0042052   GO:0002141   GO:0005886   GO:0032420   GO:0016021   GO:0032414   GO:0072499   GO:0005623   GO:0045475   GO:0008582   GO:1900074   GO:0045202   GO:0046716   GO:0005515   GO:0007264   GO:0007165   GO:0005694   GO:0003824   GO:0006520   GO:0008483   GO:0006418   GO:0016507   GO:0048384  

Length:

158

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00111

Exp number, first 60 AAs:

0

Total prob of N-in:

0.15824

outside

1  -  158

 

 

Pi

137.209304

Theta

147.985558

Tajima's D

-0.769197

CLR

687.441718

CSRT

0.182240887955602

Interpretation

Uncertain