SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02152
Pre Gene Modal
BGIBMGA003011
Annotation
PREDICTED:_ral_guanine_nucleotide_dissociation_stimulator_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.191
 

Sequence

CDS
ATGAGCCAGGATGCGGAGAGCTTGCCAACATGGCGGTTGTGGGGGGAAGAGCGCGTGGACGGCGCCATCTACACCGTTTATCTGAAGAAAGTGCGTTACCATCGACCTACCAAAAGTGCTTCAAGTGAGTCTGACGACGAGATCTCACATTTAGAGTGGGAAACCGTACGTGTACGGTTCGTAAAAGCCGGCACAGTCGAGCGGCTAGTGGAGGCGCTCGCTACCGACGACGGCGAACTCGAGTCCACATACGTCAATGTGTTCCTCGCGACGTACCGGTCATTCGCGGAATGCAGTCATGTTCTGGATCTCCTGCTGCGACGGTATGAAACCCTTGCCGCTGAGGACATACTTCCCGCTGCGACTGACACATCACAACAACACCGAAAGACTCTTGTAGCGTGTCTCCACGTGTGGTTGGACACATATCCGGAGGACTTTCGGCAGCCGCCGCACCATCCCGCACTGCAACAGCTGCTCGCCTTCACGCAACTTCATTTACCCGGATCAGAATTACACTCGAAGGTATTACAGAAGCTAGCCATATTCAGTGCGGAACGAAATGGAGGTGTGCAGATGTCTGGAGGGGGCGCCGTGTGCCTTGCTCCTGGCATGCGCCTCTCCGCACATCTCACCAGCGCCTACCGCCTGCCACACGTTCCCCATCGACACTTCGCCGAACAACTTACCAGGATGGACATGGAGCTGTTCAAGAAGCTCGTGCCCCACCAGTGCCTCGGAGCCGTCTGGTCACGTAGAGATAAGGACCGTTCCCACGACGCGGCCACTGTCCTCGCAACCGTCAACCAGTTCAATGCGGTATCGTTCCGCGTCATTTCGACTGTACTCGTGGAGCTCAACTTGAAGCCGGCCGAGCGTGCCGATATTCTTGCTGCCTGGCTTGATATAGCTCGCGAACTGAGAGTTCTTAAAAACTTTTCATCGCTCAAAGCGATTATCTCAGGGTTGCAGAGCAATCCGGTTTATAGACTGAGAAAAACGTGGGCGACTTTACAAAAAGAAAAAGCTGAGCTTTACGATGAACTAGCCCGAATTTTCAGTGAAGACAATAACAGATGGGCTCAGAGGGAGTTGCTGATGCGCGAAGGTACTGCTAAATTTGCTGATACTGTGGGAGAAAACGATCGTCAATTACAAAAACTTCTTCACGAGCGCGGCTCACCAGGTGTCAGCCACGGGACCATTCCATATCTCGGCACGTTTTTGACCGATCTCACAATGATAGATACTGCCATTCCGGATACAGTAACCGACGGTTTGATTAATTTTGATAAGAAACGTAAAGAATTCGAAGTGCTGGCTCAGATCAAATTACTGCAAGGAGCTGCCAACGCCTACCATTTACCCTCCGATCCGATGTTTGACCGGTGGTTTGATTCGGTTATTGTGCTTGATGACAGGGAAGCATATCAGCTATCTTGTCAAATTGAGCCACCGACGAACCCACCCAAAGAGAGACGACCAAAGAAGATAAACGACGCCAACGTTCAAAGTCATAGGAAAAACGACTCGATCGCCAGCACGAGTTCTAGCAATAGTTCACAATTCTTTTGCGAAACCGATGGAACAACTACCGCTTGGAAGAGAGATAGTCTTGAAACGCGAATCTCTCCGACAAGGCTGTCACACGGTTCTTCGTCTTCATCGCTACCGTCTCTGGATGTCTCATTGTCCAGTGCTAACAGTGGACAGAAGCCAAACGGCAAAGCTGGGGGCAGTCCTGCACATCCGGGTGTTCGAAGTGGCCCAGACTTTTATATAATACGAGTGACATATGAGTCGGATTGTGCAGAAACCGAAGGCGTTGTGTTGTACAAGTCTATTATGTTAAGTAACAATGAACGCACGCCTCAAGTGATTCGGAACGCAATGCTCAAACTCAATCTTGATGGAGATCCCGATTCTTATACCTTGGCTCAAGTACTACTCGAACGAGAGATGTTGCTCCCATCGAATGCAAATGTCTACTACGCTGTTAATACCGCTTATAATTTGAACTTCATTTTACGGCCTCGGAAGAACCAGCAGCAAGAGCCAGTGGTTAATGGGAAGTCGAAAGGGAAACGAAACTAA
Protein
MSQDAESLPTWRLWGEERVDGAIYTVYLKKVRYHRPTKSASSESDDEISHLEWETVRVRFVKAGTVERLVEALATDDGELESTYVNVFLATYRSFAECSHVLDLLLRRYETLAAEDILPAATDTSQQHRKTLVACLHVWLDTYPEDFRQPPHHPALQQLLAFTQLHLPGSELHSKVLQKLAIFSAERNGGVQMSGGGAVCLAPGMRLSAHLTSAYRLPHVPHRHFAEQLTRMDMELFKKLVPHQCLGAVWSRRDKDRSHDAATVLATVNQFNAVSFRVISTVLVELNLKPAERADILAAWLDIARELRVLKNFSSLKAIISGLQSNPVYRLRKTWATLQKEKAELYDELARIFSEDNNRWAQRELLMREGTAKFADTVGENDRQLQKLLHERGSPGVSHGTIPYLGTFLTDLTMIDTAIPDTVTDGLINFDKKRKEFEVLAQIKLLQGAANAYHLPSDPMFDRWFDSVIVLDDREAYQLSCQIEPPTNPPKERRPKKINDANVQSHRKNDSIASTSSSNSSQFFCETDGTTTAWKRDSLETRISPTRLSHGSSSSSLPSLDVSLSSANSGQKPNGKAGGSPAHPGVRSGPDFYIIRVTYESDCAETEGVVLYKSIMLSNNERTPQVIRNAMLKLNLDGDPDSYTLAQVLLEREMLLPSNANVYYAVNTAYNLNFILRPRKNQQQEPVVNGKSKGKRN

Summary

EMBL
BABH01010415    NWSH01003201    PCG66799.1    PCG66798.1    PCG66802.1    ODYU01003388    + More
SOQ42088.1    KQ460709    KPJ12718.1    KQ459598    KPI94691.1    AGBW02014507    OWR41548.1    PCG66800.1    JTDY01008089    KOB64749.1    GEZM01059416    JAV71488.1    GEDC01027346    JAS09952.1    GEDC01019234    GEDC01011640    GEDC01005825    GEDC01004469    JAS18064.1    JAS25658.1    JAS31473.1    JAS32829.1    GECZ01026214    JAS43555.1    NEVH01023958    PNF17742.1    PNF17743.1    GBYB01010980    GBYB01010984    JAG80747.1    JAG80751.1    GBYB01005327    JAG75094.1    GBYB01010981    JAG80748.1    KQ971326    EFA00851.2    KK852770    KDR16917.1    KQ976699    KYM77426.1    KQ435748    KOX76425.1    ADTU01019847    ADTU01019848    GBBI01002802    JAC15910.1    GECL01000983    JAP05141.1    GBBI01002801    JAC15911.1    GGFL01005965    MBW70143.1    GL453538    EFN75893.1    QOIP01000007    RLU20017.1    GFDL01003956    JAV31089.1    GFDL01003199    JAV31846.1    GFDL01003957    JAV31088.1    KK107019    EZA62712.1    GL441834    EFN64198.1    KQ982635    KYQ53333.1    KQ979548    KYN21077.1    KQ434978    KZC12954.1    ATLV01011092    ATLV01011093    ATLV01011094    KE524639    KFB35848.1    KQ977121    KYN05524.1    JXUM01055230    JXUM01055231    KQ561857    KXJ77307.1    KQ981241    KYN44276.1    ADMH02000692    ETN65299.1    AXCN02001805    GGFL01002624    MBW66802.1    GBHO01013273    GBRD01000378    GDHC01006903    JAG30331.1    JAG65443.1    JAQ11726.1    GGFL01002199    MBW66377.1    AAAB01008979    EAL39337.3    GBRD01000377    JAG65444.1    APCN01003495    CH477203    EAT48018.1    LBMM01001960    KMQ95472.1    GGFK01003569    MBW36890.1    GGFK01003798    MBW37119.1    AXCM01009161    GFDF01006476    JAV07608.1    KQ765234    OAD53999.1    GBHO01013274    JAG30330.1    GAKP01016268    JAC42684.1    GDHF01020313    JAI32001.1    ACPB03001559    GBXI01013248    GBXI01007512    GBXI01004281    JAD01044.1    JAD06780.1    JAD10011.1    GFDF01006613    JAV07471.1    UFQT01001862    SSX32034.1    GFDF01006614    JAV07470.1    GAKP01016269    JAC42683.1    GAKP01016270    JAC42682.1    GDHF01015765    JAI36549.1    GBXI01013272    JAD01020.1    PYGN01000252    PSN50080.1    GL768059    EFZ12713.1    KZ288250    PBC31064.1    DS231923    EDS26788.1    CVRI01000037    CRK93643.1    KB631657    ERL85088.1    APGK01045058    APGK01045059    KB741028    ENN74870.1    GDIP01078840    JAM24875.1    GDIP01143630    GDIP01119128    LRGB01002076    JAJ79772.1    KZS09338.1    GDIQ01227588    GDIQ01184452    JAK24137.1    GDIP01240537    JAI82864.1    GL732542    EFX81840.1    GGMS01002847    MBY72050.1    ABLF02038419    ABLF02038428    GFXV01002792    MBW14597.1    GFXV01007468    MBW19273.1    GGMR01013568    MBY26187.1    CH954178    KQS43924.1    GFTR01007281    JAW09145.1   
Pfam
PF00617   RasGEF        + More
PF00788   RA
PF00618   RasGEF_N
PF00595   PDZ
Interpro
IPR023578   Ras_GEF_dom_sf        + More
IPR036964   RASGEF_cat_dom_sf       
IPR008937   Ras-like_GEF       
IPR001895   RASGEF_cat_dom       
IPR000651   Ras-like_Gua-exchang_fac_N       
IPR000159   RA_dom       
IPR019804   Ras_G-nucl-exch_fac_CS       
IPR029071   Ubiquitin-like_domsf       
IPR003124   WH2_dom       
IPR001478   PDZ       
IPR036034   PDZ_sf       
IPR018247   EF_Hand_1_Ca_BS       
SUPFAM
SSF54236   SSF54236        + More
SSF48366   SSF48366       
SSF50156   SSF50156       
Gene 3D
PDB
5CM9     E-value=1.43903e-53,     Score=532

Ontologies

Topology

Length:
697
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.35499
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00037
outside
1  -  697
 
 

Population Genetic Test Statistics

Pi
27.732514
Theta
199.053524
Tajima's D
1.300214
CLR
0.200718
CSRT
0.737513124343783
Interpretation
Uncertain
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