SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02149
Pre Gene Modal
BGIBMGA003152
Annotation
PREDICTED:_protein_O-mannosyltransferase_1_isoform_X2_[Bombyx_mori]
Full name
Protein O-mannosyltransferase 1      
Alternative Name
Dolichyl-phosphate-mannose--protein mannosyltransferase 1
Protein rotated abdomen
Location in the cell
PlasmaMembrane   Reliability : 4.053
 

Sequence

CDS
ATGGACACAGGACGGTGTGTTAAAAATCGTAAAATAAACAAGATTCGTAAGGAGGTCACAGAACCTCAGGAGTACAGTTATTCGGAGAAAACATGTAATTCCCATCGAGAAGTGGGCGATGGTGCCCCAGCTGAAAATGAAACTGAAAAACCAGAATTAATGCTGACGAACAAAATGAATCATTCTCCTTCACGCATATATTTACAGCTCAAGATTGATGTAATCGCAATAGGACTTCTAATATTGGCATTATGCACTCGTTTATATAAACTAGATGAACCTCGCCATATTGTATTTGATGAATTACATTATGGAAGATATGTTTCATTATATACTAAGGGTGTCTTTTTTTTTGATGCTCATCCACCACTTGGCAAACAGTTGTTATATCTAGCTGGTAGTATTGCTGGATATGATGGAAACTTTACTTTTGACCGGATTGGTACTCCATATACTGACAATGTTCCTGTGAAGGCTCTCAGGCTAGTTCCAGCTGTGTCAGGAAGTTTTCTAGTTTTAATTACATATTTTTTGATGCTAGAACTATCTTTACATCAATGGACTGCCATACTTGCTGCTTTATTAGTGCTCCTTGAAAATTGTTTCTTAGCACAGTCAAGGTTCATGTTGCTGGAAAGCATTCAGATACTATTTGGCTTGTGCGGTGTGTATTGTATTATTAAAAGTACAAAGAGAATTGGACTCACAGCACTTGTTTGGCTATGTGCTGCTGCTGTTTTGCTTGGTTGTTGCTTCTCGGTGAAATACTCTGGGCTGTACACATACTATTTATCATTATTCTTAGTTGGAAGACACATATGGTTGCAACTAGACCAAATAAAATCAGGAACACGTTTATTATTTTCTGCCTTGTGGCGGTTTGCGGTCTTATTGATCATCCCGCTGGCTGTGTATGTGAGCGTGTTTTACATGCATTTGTCTATGTTGCCAAAGGCTGGACCGCATGACAGTGTTATGACGAGTGCATTCCAAGCCTCATTACAGGGCGGCCTTGCGAGCATAACGCACGGACAGCCATTGCATGTCGCTCACGGCTCTCAAATAACACTCAGGCACACCCACGGCAGGACCTGTTGGCTCCATTCACACGCACACGTATATCCAGTGCGTTATGCGGACGGACGTGGCTCCTCACACCAGCAGCAAGTGACTTGTTACAGCTTCAAAGATGTCAACAATTGGTGGATTGTAAAACGGCCGGACCAAGCGTCGCTGGCCGTTTCGCGACCTCCAGACGCTATAAGACACGGAGATATCGTACAACTGTTGCATGGAATAACGAGTCGCGCTTTGAATTCCCACGATGTGGCCGCAGCTGTTTCGCCTCAATCTCAAGAAGTGTCTTGCTACATCGACTACAATGTATCGATGCCAGCTCAGAATCTTTGGCGTGTGGATATTGTGAATCGTGATTCTGAAGAGTCAACCTGGGATAGCATACGCTCGTTAGTGAGACTTGTTCACGTTGACACGGGGTCGGGCTTGCGTTACAGTGGTCGCCAACTTCCGGCTTGGGGTTTCCATCAACATGAGATTGTTGCTGACAAGGTGTTATCCCATCAAGATACAATATGGAATGTTGAAGAGCATCGCTATACCAAAGCCGATGATCGAAAAGAACGGGAACGCGAGTTAGTCACGGCTGAAATGATACCGACTGCAGTGACCCAATTAACTTTTTGGGAAAAATTTACAGAATTACAATATAAAATGATAGCACACGCACCTGATGCCCCTCACGGGCACATGTTTGCCAGCGAACCAGCTGAATGGCCTCTGCTTGTTCGTTCAATTGCATATTGGCTCTCTCCTGACTCTAATGCTCAAATACATCTGATAGGCAACATTGTAACATGGTATACTGGGACAATATCGGTAGTAGTCTACAGTGCCCTCCTGGCTATTTACTCCGTTCGAAAACGTCGAGCTTGTGAAGACTTGCCTCCATTTGTTTTGAATAAGTTTTATGAAACTGGCTATACATTATTTCTAGGTTATTGTGTTCTGAACTATGGAAATGTTGATTTAAAGGAAAATGATCTAATGAGTCTTAGGTGGAAAGATACCTGGGACTTTATATTACATAAAAAGATATAA
Protein
MDTGRCVKNRKINKIRKEVTEPQEYSYSEKTCNSHREVGDGAPAENETEKPELMLTNKMNHSPSRIYLQLKIDVIAIGLLILALCTRLYKLDEPRHIVFDELHYGRYVSLYTKGVFFFDAHPPLGKQLLYLAGSIAGYDGNFTFDRIGTPYTDNVPVKALRLVPAVSGSFLVLITYFLMLELSLHQWTAILAALLVLLENCFLAQSRFMLLESIQILFGLCGVYCIIKSTKRIGLTALVWLCAAAVLLGCCFSVKYSGLYTYYLSLFLVGRHIWLQLDQIKSGTRLLFSALWRFAVLLIIPLAVYVSVFYMHLSMLPKAGPHDSVMTSAFQASLQGGLASITHGQPLHVAHGSQITLRHTHGRTCWLHSHAHVYPVRYADGRGSSHQQQVTCYSFKDVNNWWIVKRPDQASLAVSRPPDAIRHGDIVQLLHGITSRALNSHDVAAAVSPQSQEVSCYIDYNVSMPAQNLWRVDIVNRDSEESTWDSIRSLVRLVHVDTGSGLRYSGRQLPAWGFHQHEIVADKVLSHQDTIWNVEEHRYTKADDRKERERELVTAEMIPTAVTQLTFWEKFTELQYKMIAHAPDAPHGHMFASEPAEWPLLVRSIAYWLSPDSNAQIHLIGNIVTWYTGTISVVVYSALLAIYSVRKRRACEDLPPFVLNKFYETGYTLFLGYCVLNYGNVDLKENDLMSLRWKDTWDFILHKKI

Summary

Description
Rt/POMT1 and tw/POMT2 function as a protein O-mannosyltransferase in association with each other to generate and maintain normal muscle development.
Catalytic Activity
dolichyl beta-D-mannosyl phosphate + L-seryl-[protein] = 3-O-(alpha-D-mannosyl)-L-seryl-[protein] + dolichyl phosphate + H(+)
dolichyl beta-D-mannosyl phosphate + L-threonyl-[protein] = 3-O-(alpha-D-mannosyl)-L-threonyl-[protein] + dolichyl phosphate + H(+)
Subunit
Interacts with tw/POMT2.
Similarity
Belongs to the glycosyltransferase 39 family.
Keywords
Complete proteome   Developmental protein   Endoplasmic reticulum   Glycoprotein   Glycosyltransferase   Membrane   Reference proteome   Repeat   Transferase   Transmembrane   Transmembrane helix  
Feature
chain  Protein O-mannosyltransferase 1
EC Number
2.4.1.109
EMBL
ODYU01011353    SOQ57045.1    AGBW02014506    OWR41554.1    NWSH01003201    PCG66793.1    + More
KZ288253    PBC30948.1    LJIG01002331    KRT84609.1    NEVH01019395    PNF22479.1    GL888175    EGI66055.1    KQ982330    KYQ57674.1    KQ971342    EFA03006.2    ADTU01005005    ADTU01005006    GBBI01002782    JAC15930.1    KK107144    QOIP01000003    EZA57599.1    RLU24315.1    KQ977580    KYN01760.1    GL446154    EFN88395.1    KQ981856    KYN34645.1    KQ434777    KZC04285.1    KQ980404    KYN16198.1    BT126988    AEE61950.1    APGK01034125    KB740904    ENN78451.1    NNAY01003486    OXU19345.1    KB632006    ERL87963.1    GEZM01059416    JAV71489.1    DS235219    EEB13374.1    GBYB01008836    GBYB01008838    JAG78603.1    JAG78605.1    GEFH01002408    JAP66173.1    GEDC01016863    GEDC01009346    JAS20435.1    JAS27952.1    GEBQ01028051    GEBQ01003489    JAT11926.1    JAT36488.1    JRES01000005    KNC34982.1    GACK01005177    JAA59857.1    GDHC01020914    JAP97714.1    GFPF01007376    MAA18522.1    GEDV01004782    JAP83775.1    CH933809    EDW19311.1    CM002912    KMY99011.1    CM000363    EDX10095.1    CH480815    EDW41120.1    GBXI01017423    JAC96868.1    OUUW01000002    SPP77086.1    X95956    AB176550    AE014296    AY071270    AAF50046.2    AAL48892.1    BAD54754.1    CAA65194.1    ABLF02031480    GFAA01003514    JAT99920.1    KK852432    KDR24004.1    CH479199    EDW29400.1    CM000159    EDW94152.1    CH940647    EDW70930.1    KRF85195.1    GANP01007871    JAB76597.1    GFAC01005082    JAT94106.1    ABJB010465798    ABJB010495453    ABJB010952312    ABJB010978496    DS823764    EEC11850.1    KQ414621    KOC67579.1    CH379069    KK854178    PTY12654.1    CCAG010020780    CH954178    EDV51430.1    CP012525    ALC44725.1    GANP01012886    JAB71582.1    CH902618    EDV39360.1    JH430339    GGLE01002047    MBY06173.1    CH963847    EDW72750.2    GAMC01009462    GAMC01009460    GAMC01009458    GAMC01009456    GAMC01009454    GAMC01009452    JAB97099.1    GDHF01028653    JAI23661.1    CVRI01000037    CRK93645.1    CH916366    EDV97088.1    GEDC01001062    JAS36236.1    UFQT01000995    SSX28355.1    UFQS01001598    UFQT01001598    SSX11541.1    SSX31108.1    KQ761797    OAD56791.1    GAKP01018885    GAKP01018884    JAC40067.1    KQ976440    KYM86491.1    APCN01003494    GDRN01100275    GDRN01100274    GDRN01100273    GDRN01100271    JAI58605.1    AXCM01003724    GDIP01251960    JAI71441.1    AAAB01008979    EAA13728.4    DS231923    EDS26784.1    GDIP01251916    JAI71485.1    AXCN02001805    CAEY01001374    GDIQ01152320    JAK99405.1    GBYB01008837    JAG78604.1   
Pfam
PF02366   PMT        + More
PF16192   PMT_4TMC
PF02815   MIR
PF01770   Folate_carrier
PF06080   DUF938
Interpro
IPR036300   MIR_dom_sf        + More
IPR027005   GlyclTrfase_39-like       
IPR032421   PMT_4TMC       
IPR003342   Glyco_trans_39/83       
IPR016093   MIR_motif       
IPR020846   MFS_dom       
IPR002666   Folate_carrier       
IPR036259   MFS_trans_sf       
IPR010342   DUF938       
IPR029063   SAM-dependent_MTases       
SUPFAM
SSF82109   SSF82109        + More
SSF103473   SSF103473       
SSF53335   SSF53335       
PDB
3MAL     E-value=2.58569e-07,     Score=134

Ontologies

Topology

Subcellular location
Endoplasmic reticulum membrane  
Length:
705
Number of predicted TMHs:
6
Exp number of AAs in TMHs:
156.67352
Exp number, first 60 AAs:
6e-05
Total prob of N-in:
0.78967
inside
1  -  156
TMhelix
157  -  179
outside
180  -  183
TMhelix
184  -  203
inside
204  -  207
TMhelix
208  -  227
outside
228  -  236
TMhelix
237  -  259
inside
260  -  288
TMhelix
289  -  311
outside
312  -  622
TMhelix
623  -  645
inside
646  -  705
 
 

Population Genetic Test Statistics

Pi
178.613657
Theta
178.388492
Tajima's D
0.279474
CLR
1.850559
CSRT
0.454977251137443
Interpretation
Uncertain
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