Gene

KWMTBOMO02138  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003156

Annotation

Alpha-methylacyl-CoA_racemase_[Operophtera_brumata]

Location

Bomo_Chr4(-):12693552-12695526      View in EpiBrowser

Full name

Alpha-methylacyl-CoA racemase      

Alternative Name

2-methylacyl-CoA racemase

Location in the cell

Cytoplasmic   Reliability : 2.113

CDS

ATGGCGTTAAAAGGAATAAAAGTTCTCGAGTTCATGGGATTAGCTCCAGGTCCTATGTGTGGCACAATTCTAGCAGATTTTGGAGCGAGTGTTACTGTAATTGAAAAGATACAAAGAACGGTTTTTGATGTAATGTCCAATGGAAAGAGGATTTTAGCAGTTAATTTAAAAACCAAGGAAGGTGTGGACATTGTCAAGCAGCTTTCAAACTCATCTGATGTACTTTTAGACACTTTTCGTCCTGGTGTGATGGAAAAGTTGGGTTTAGGCCCTGAAAAACTTCTAGAACAAAACCCACGGCTTATTTATGCTAGATTAACTGGTTATGGTCAAAATAATTATAATAAAATGAAAGCTGGGCACGACATAAATTACGTCGCAGTGTCTGGTATTTTATCATTATTAAGGAGAAATAATCAACCTCCATTTCCTCCAATCAATCTTTTGGGCGACTTTGCTGGTGGAAGTTTATTGTGTGCATTTGGCATATTGTTAGCCTTGTTAGAGAGAAGTGTTTCTGGAAAAGGTCAGGTTGTAGATACAAGTATGACTCAAGGTCTAGCTTATATTTCAACTTGGTTGTTTAAATCAAGAACTTTACCTATCTGGTCAGGAGAACCTGGATCCAATGTTTTAGATGGAGGATTTCATTTTTATCAAACTTATCAAACAAAAGATGGAAAATATATGGCTGTGGGTGCCCTAGAACCCCAATTTTATTCCAATCTCATGAAGGGATTGAATTTATCCGAGGAAGAGTATTCACAATTTACAGATAAAGATATTTGTAAAAAAAAATTTCAAGATGTATTTCTCACCAAAACACAAGAAGAATGGTGTGCAATATTTGATAAATTGGATGCATGTGTTACTCCAGTACTAGATTTTGATGAGATTGATAAAACAAAGTACCACACTTTTGATAATACATTTTATAGGAATGATGAAGGCAATGTTGTTCCACAACCTGCACCAAGACTCTCAAGAACTCAAGGTATCTCCAGTAGTTGTAAAAAAATGCCTAAGCATGGAGAGCATACCATTACCATATTAAGAGAAATAGGATATAGTGAGAATCAAATTAAAGACTTGATCTTGAGTGGACATGTTTATGCAGACAAAAAATCATTATTGTAG

Protein

MALKGIKVLEFMGLAPGPMCGTILADFGASVTVIEKIQRTVFDVMSNGKRILAVNLKTKEGVDIVKQLSNSSDVLLDTFRPGVMEKLGLGPEKLLEQNPRLIYARLTGYGQNNYNKMKAGHDINYVAVSGILSLLRRNNQPPFPPINLLGDFAGGSLLCAFGILLALLERSVSGKGQVVDTSMTQGLAYISTWLFKSRTLPIWSGEPGSNVLDGGFHFYQTYQTKDGKYMAVGALEPQFYSNLMKGLNLSEEEYSQFTDKDICKKKFQDVFLTKTQEEWCAIFDKLDACVTPVLDFDEIDKTKYHTFDNTFYRNDEGNVVPQPAPRLSRTQGISSSCKKMPKHGEHTITILREIGYSENQIKDLILSGHVYADKKSLL

Catalytic Activity

(2S)-2-methylacyl-CoA = (2R)-2-methylacyl-CoA

Similarity

Belongs to the CoA-transferase III family.

Keywords

Acetylation   Complete proteome   Direct protein sequencing   Isomerase   Mitochondrion   Peroxisome   Reference proteome  

Feature

chain  Alpha-methylacyl-CoA racemase

Uniprot

H9J0W9   A0A2H1WYM1   A0A2A4ISR6   A0A2W1BVL2   A0A0L7LKE9   A0A2A4IRA6   + More
A0A0N1IFE6   A0A194PPP4   A0A212FA59   A0A1Y1MA96   A0A087U2T0   D6WLY2   A0A210PRF7   A0A182F5J2   A0A1I8PSN8   A0A2M4ARL8   A0A226F0G6   A0A182NEU3   Q16JP4   W5JBK3   Q5ZL63   A0A2M4BRA5   A0A2P4TAM5   E0VVM3   F1NKY1   A0A1B6GNS4   K7J8X2   A0A1B6IW22   A0A0K8TKU1   K1QBH3   A0A232ENJ8   A0A0L7R8N6   A0A2I0U6H0   Q68EP6   A0A3L8S8K8   B0WCR2   A0A0P5HJL2   A0A182RG38   C3Z661   A0A0P5ZIY5   A0A0P4ZTD2   A0A218UYQ7   A0A182J6M1   A0A1B6IRN8   A0A224YMU9   A0A226PGF2   A0A182HE92   A0A131Z2I4   A0A182LYD6   A0A182V9L6   A0A182PAN6   A0A0Q3M7W9   A0A226NH30   A0A182QHQ4   A0A2J7RL54   A0A182TVN1   A0A1W4UX75   R7T7Y7   A0A067RA56   A0A023GLS5   A9UMM3   A0A2M4BPX0   A0A1Q3FI80   A0A0B6ZFE0   O09174   D3TMR8   A0A147BRZ2   A0A182XFV2   Q7PN33   A0A182IC37   A0A0C9QBA8   A0A1B6C2W6   A0A182L0G0   A0A0A9WTM5   A0A1E1XC65   A0A0B6ZF29   A0A0K8TD63   A0A0N8E0W4   A0A131XXV0   A0A151XDL0   A0A1I8M9T6   A0A026WUS1   B3MK20   J3JW73   A0A182WHB8   A0A0P4ZNI2   A0A3M6UVU3   A0A0K8S2S4   A0A1S3JZQ2   A0A1B0A0P8   A0A158P3I3   A0A0K8RT37   A0A182JZJ7   A0A3B4BXB8   U5EV35   V4A4I4   A0A154PKT2   E2CAE7   E9G2H4   C1BK28  

EC Number

5.1.99.4

Pubmed

19121390    28756777    26227816    26354079    22118469    28004739    + More
18362917    19820115    28812685    17510324    20920257    23761445    15642098    20566863    15592404    20075255    26369729    22992520    28648823    20431018    30282656    18563158    28797301    24621616    26483478    26830274    23254933    24845553    27762356    16141072    10770938    9307041    21183079    23806337    23576753    20353571    29652888    12364791    14747013    17210077    20966253    25401762    26823975    28503490    25315136    24508170    30249741    17994087    22516182    23537049    30382153    25727380    21347285    20798317    21292972   

EMBL

BABH01010426    ODYU01011624    SOQ57484.1    NWSH01008529    PCG62526.1    KZ149933    + More
PZC77237.1    JTDY01000796    KOB75844.1    PCG62527.1    KQ460709    KPJ12704.1    KQ459598    KPI94704.1    AGBW02009514    OWR50621.1    GEZM01036577    JAV82583.1    KK117880    KFM71669.1    KQ971343    EFA04186.1    NEDP02005548    OWF39044.1    GGFK01010041    MBW43362.1    LNIX01000001    OXA63289.1    CH477997    EAT34518.1    ADMH02001866    ETN60778.1    AJ719871    CAG31530.1    GGFJ01006393    MBW55534.1    PPHD01003610    POI33413.1    DS235812    EEB17429.1    AC212746    GECZ01005709    JAS64060.1    GECU01016614    JAS91092.1    GDAI01002659    JAI14944.1    JH817073    EKC18886.1    NNAY01003150    OXU19902.1    KQ414632    KOC67204.1    KZ506097    PKU41612.1    AAMC01116568    BC080155    AAH80155.1    QUSF01000044    RLV98176.1    DS231890    EDS43788.1    GDIP01150259    GDIQ01227156    JAJ73143.1    JAK24569.1    GG666584    EEN51987.1    GDIP01056566    JAM47149.1    GDIP01221802    JAJ01600.1    MUZQ01000092    OWK58756.1    GECU01018101    JAS89605.1    GFPF01005923    MAA17069.1    AWGT02000073    OXB79155.1    JXUM01241294    KQ635199    KXJ62524.1    GEDV01002933    JAP85624.1    AXCM01007660    LMAW01002630    KQK78839.1    MCFN01000056    OXB66717.1    AXCN02000840    NEVH01002699    PNF41560.1    AMQN01015837    KB312277    ELT87540.1    KK852595    KDR20634.1    GBBM01001360    JAC34058.1    BC157715    CM004466    AAI57716.1    OCU02615.1    GGFJ01005995    MBW55136.1    GFDL01007791    JAV27254.1    HACG01020277    CEK67142.1    AK048249    AK002401    U89906    EZ422720    ADD18996.1    GEGO01001870    JAR93534.1    AAAB01008964    EAA12853.3    APCN01000774    GBYB01000529    JAG70296.1    GEDC01029753    JAS07545.1    GBHO01035404    GDHC01012294    JAG08200.1    JAQ06335.1    GFAC01002343    JAT96845.1    HACG01020278    CEK67143.1    GBRD01002726    JAG63095.1    GDIQ01072756    JAN21981.1    GEFM01003712    JAP72084.1    KQ982268    KYQ58461.1    KK107088    QOIP01000008    EZA59795.1    RLU19846.1    CH902620    EDV31438.1    APGK01034107    BT127491    KB740904    KB632006    AEE62453.1    ENN78438.1    ERL87949.1    GDIP01213998    JAJ09404.1    RCHS01000617    RMX57740.1    GBKD01000110    JAG47508.1    ADTU01008064    ADTU01008065    ADTU01008066    ADTU01008067    GBKC01002072    JAG43998.1    GANO01002055    JAB57816.1    KB202752    ESO88171.1    KQ434936    KZC11908.1    GL453976    EFN75058.1    GL732530    EFX86308.1    BT074957    ACO09381.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000053240    UP000053268    UP000007151    + More
UP000054359    UP000007266    UP000242188    UP000069272    UP000095300    UP000198287    UP000075884    UP000008820    UP000000673    UP000009046    UP000000539    UP000002358    UP000005408    UP000215335    UP000053825    UP000008143    UP000276834    UP000002320    UP000075900    UP000001554    UP000197619    UP000075880    UP000198419    UP000069940    UP000249989    UP000075883    UP000075903    UP000075885    UP000051836    UP000198323    UP000075886    UP000235965    UP000075902    UP000192221    UP000014760    UP000027135    UP000186698    UP000000589    UP000076407    UP000007062    UP000075840    UP000075882    UP000075809    UP000095301    UP000053097    UP000279307    UP000007801    UP000019118    UP000030742    UP000075920    UP000275408    UP000085678    UP000092445    UP000005205    UP000075881    UP000261440    UP000030746    UP000076502    UP000008237    UP000000305   

PRIDE

H9J0W9    O09174   

Pfam

PF02515   CoA_transf_3

Interpro

IPR003673   CoA-Trfase_fam_III        + More
IPR023606   CoA-Trfase_III_dom_sf       

SUPFAM

SSF89796   SSF89796       

Gene 3D

3.40.50.10540    

ProteinModelPortal

H9J0W9   A0A2H1WYM1   A0A2A4ISR6   A0A2W1BVL2   A0A0L7LKE9   A0A2A4IRA6   + More
A0A0N1IFE6   A0A194PPP4   A0A212FA59   A0A1Y1MA96   A0A087U2T0   D6WLY2   A0A210PRF7   A0A182F5J2   A0A1I8PSN8   A0A2M4ARL8   A0A226F0G6   A0A182NEU3   Q16JP4   W5JBK3   Q5ZL63   A0A2M4BRA5   A0A2P4TAM5   E0VVM3   F1NKY1   A0A1B6GNS4   K7J8X2   A0A1B6IW22   A0A0K8TKU1   K1QBH3   A0A232ENJ8   A0A0L7R8N6   A0A2I0U6H0   Q68EP6   A0A3L8S8K8   B0WCR2   A0A0P5HJL2   A0A182RG38   C3Z661   A0A0P5ZIY5   A0A0P4ZTD2   A0A218UYQ7   A0A182J6M1   A0A1B6IRN8   A0A224YMU9   A0A226PGF2   A0A182HE92   A0A131Z2I4   A0A182LYD6   A0A182V9L6   A0A182PAN6   A0A0Q3M7W9   A0A226NH30   A0A182QHQ4   A0A2J7RL54   A0A182TVN1   A0A1W4UX75   R7T7Y7   A0A067RA56   A0A023GLS5   A9UMM3   A0A2M4BPX0   A0A1Q3FI80   A0A0B6ZFE0   O09174   D3TMR8   A0A147BRZ2   A0A182XFV2   Q7PN33   A0A182IC37   A0A0C9QBA8   A0A1B6C2W6   A0A182L0G0   A0A0A9WTM5   A0A1E1XC65   A0A0B6ZF29   A0A0K8TD63   A0A0N8E0W4   A0A131XXV0   A0A151XDL0   A0A1I8M9T6   A0A026WUS1   B3MK20   J3JW73   A0A182WHB8   A0A0P4ZNI2   A0A3M6UVU3   A0A0K8S2S4   A0A1S3JZQ2   A0A1B0A0P8   A0A158P3I3   A0A0K8RT37   A0A182JZJ7   A0A3B4BXB8   U5EV35   V4A4I4   A0A154PKT2   E2CAE7   E9G2H4   C1BK28  

PDB

2YIM     E-value=5.10916e-68,     Score=654

KEGG

101736242    K01796 alpha-methylacyl-CoA racemase [EC:5.1.99.4] | (RefSeq) alpha-methylacyl-CoA racemase

PATHWAY

01100    Metabolic pathways - Bombyx mori (domestic silkworm)
04146    Peroxisome - Bombyx mori (domestic silkworm)

GO

GO:0003824   GO:0016021   GO:0008111   GO:0005886   GO:0005102   GO:0005777   GO:0005739   GO:0008206   GO:0043231   GO:0006699   GO:0006631   GO:0008300   GO:0005737   GO:0008270   GO:0005674   GO:0006366   GO:0006520   GO:0008483   GO:0006418   GO:0016507   GO:0048384  

Subcellular location

Peroxisome  
Mitochondrion  

Length:

378

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

10.91332

Exp number, first 60 AAs:

3.95825

Total prob of N-in:

0.15664

outside

1  -  378

 

 

Pi

153.633618

Theta

198.398106

Tajima's D

-0.565356

CLR

0.718766

CSRT

0.228688565571721

Interpretation

Uncertain