SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02133  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA003004
Annotation
small_nuclear_ribonucleoprotein_polypeptide_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.205
 

Sequence

CDS
ATGGGCGGGCCTGGAAGTGCTCGTGCTGCTGGTAGAGGCACTGGCCCGGGCGGAGTACCTCCGGGTCTTCAAGGTCCTGCCAGAGGAGTAGGCGGGCCATCTCAACAACACATGGCACCAGGAAATCGTGGTCAACTTTCTGCTCCTCCTCAAATGCGAGGAGGCCCCATGATGGGTGGCCCTCCTCCAGGAATGATGGGAGCTCCTCCTGGCATGGGTCGTGGTGGGCCAGGACGGGGTCCTCCAGGAATGCGACGCTATTAG
Protein
MGGPGSARAAGRGTGPGGVPPGLQGPARGVGGPSQQHMAPGNRGQLSAPPQMRGGPMMGGPPPGMMGAPPGMGRGGPGRGPPGMRRY

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
87
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00497
Exp number, first 60 AAs:
0.00134
Total prob of N-in:
0.22050
outside
1  -  87
 
 

Population Genetic Test Statistics

Pi
161.153446
Theta
155.67828
Tajima's D
0.655486
CLR
21.290054
CSRT
0.55977201139943
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 GQISAPPQMR 100.00 1e-04
26280517 GTNFQIMENIQR 100.00 1e-04
25044914 GVGGKPGSIISCK 100.00 1e-04
27102218 VIIQDSR 100.00 1e-04
28556443 AAGRGTGPGGVPPGLQGPAR 100.00 1e-04
28556443 VPLPGAMGGPGSAR 100.00 1e-04
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