Gene

KWMTBOMO02128

Pre Gene Modal

BGIBMGA003162

Annotation

PREDICTED:_hydrocephalus-inducing_protein_homolog_[Bombyx_mori]

Location

Bomo_Chr4(-):12559041-12572452      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.46 Nuclear   Reliability : 1.321 PlasmaMembrane   Reliability : 1.639

CDS

ATGTGTATGAAAAATGAATCTGTGTATCATGATTTTGAAGAAAAGGTAAAGCTTGCTAAAATATTTTACAATTTAAAAGACAAGGAATCCGCAAAGTCTGCTAAACTAGTCCAATACGGTATCATGAGCTGCGAGGAACATGAAAGAGTTTACACGAGGATATTTTTTGATGAAGTACAGGCACTTGTAGTTGACGAAAAATTGTTCTTTCAAAACATGCATTTCACTATTAATCCAATTAAAGGAAAGCTTTGGCCCAATGAATCAACAGACCTTACTGTCACGTTTGCACCTAAGGAACTAGGTGAAATAAATGCGTCTTTGTATTTAGACATTGAAGGCGTTGCGGATCGCGTACCGTTGACAATGGTCGGAACATCTATGCCTCCCCTAATAAATTTAAACTTAGAGACACTCAATATGGATCGTGTGTATATTAACAAGACTTATAACTACGAAGTGGTCGCTATTAACAGAGGGCATATAAATGGAGTGATAGAGTATAAAGAAATACCACCCCTATTTGGAAGTGTCATAAATTGTATACCAAAACGGCATTGTTTGAGAGCCGGAGATAAGGAGACGTTCATCGTATCATTTTGTAATTCGAATCAAGGACCATATTTCGAAGAAGTCAATTTCACAATCAGAGACACTGATATTGTTCTCAAGCTGTACCTAAAGGGTGAAGTAATATATCCCTCACTAACGTTCAGTTTGCCTTGTTTGGATTTTGGGGTTGTAAGTTTAGGAGTACCAAAAACGCTAGAACTGGATGTGATAAACGAATCCGTTGTTCAGGTCCGGGCGTCTGTTAAGATTTCCTCGGACGGACCGGAAATTAGCAGTATAACATTAACCGATTATGCTGTAGCATCAAAACCTAAGCCCAATGTACCTCAATGGCCGAGAGAGTTCAATATTGAACCTAGCAACATTGACATGGGACCTGAATCTAGAATCACTCTGAGGATAACGTTAACAGCAAATTTGATTAGAACAAATCAAACTTCTTTAGAAATAGAACTTGAAAAATCGGACAGCGCTCCCATCGTTTTGCCTGTAGTTTTTAGTGCTGTAGTCCCGGAGATAGTACCAGCCCAAGATATCAAACTACGAGCGTGTTTCATAGATTTTCCATACCAACACGAAATAAAAATAACTTCTAATCAATTTTGGGGTTATTTTACGGTCGACGAAATTAAGGAACAATCCACGTTAGAAGTTGATGTTGCCGTTAAAGAGTGCTTGATCGAACCCAACAGCACAATATGTTTACCGGTAACGATAAAAACAAGTGTACTTGGAGAACAGGAGTTCATTGTGCGACTGCATCTTTTCGGCTTGACGAAACCTATTGACATATGCCGCATTACGGGCTGTGGTGTGCGACCTATCGTCACGTGTTCCCCTATGGCTCTGCATTGGGGTCAGGTTAAATTGTTGACTAAATCTCAAAAAGTGTTAACGCTATGCAATGACTCCCCGGTGACTGTTACATTTAGGGCATCTTTGTTGAATAAAGATAGTCACTGGAGTATTCGTCCTTCTGAAGGCTACATTGACCCTGAGTCCGAAACAGATTTATTCTTTACACTCTATTTAATCGACGCCGATTTATATACGAACAAAGCTGTGATTCAACTCGAAAAAGTTAAGGAAATTTTAGTGCCGCTCTCAGCTACGGGAATCGGTACAAGTATTGTAGTCGGGGAGCTCCAGGACCATATCGTACTCGGACGACATTTCACAAGAGTTCCGTTTACCTGCAAAGTAATCATGGAAAACTTTGGCACCCGCTTACACGCATTAGAGTGGAGTGAGCATTACAAAGCGCCAAAAAATAAACAACCAACTGTGAGCTTCTTTACTCTTGAGCCTAAAGCATTCAAGATGGGCTCAGGAGAAAAAATGGAATTAGCAGTGAGCGGAACGTCTTCGAAAATTACAACGGTAAAGGAAACCTGGTACCTCATAGGCAGTATTGAAGGTGTTAATAAAAAAGAGCTATTACTGGAATGCCAAATCACAGCAGAATTCGTAGATCCAAATATAGAAATTTCATCGCCTGTCGTAGAACTACAGTACGATCATGGGCCGTATAGCGAATATTATAAATTAACTGATATTATAAGTATAAAAAATGTGGCGAAATTACCGTTGGATCTGGATATTACAGTGAAACCGCCATTTGCTATAATTCAGAAGCAAAACACTTACAAAATTCAACCTGATGAAGAAAATCTCTGTTGTTGTATTCGCTACAATGAGAATGACTTGAATTTGCCAAGTATTAACAGTGAATATGGGCCTAGAAAATCACAGGAACTAATCGACTTCTTGACTTTGAAACCGGTCGAGCCTCTACGCTTAGGACCACTTAAGTTCTTTGAAGATATACATAAAATAAAAAAGGCATTTACATTAACCCACTCTGTTGAGGAACGCTTGGAAGATGAAGAAATTATGAAACTTCAAATTTTGTTTGATACAACAAAACATTCGAGTTTAAAATCCAAAGTTTACTCGGATTTGATGAAAATAAAATTTAAAGGCCACAAAAATAAGGATGCTATTAAACTGATTGGAACAGTAAATTTTCCTAATCTGTTGGTTTTATCCCCAAAAGTGGACTTCCAGTGCCTACTTAATGAGAGCGTAATCAGCAAAACAATAAAAATACAAAACGTGACTCCCCTCTTAGTTTGCTACATGCTACATTGGAAAAAATATGTAGTTTCCAACGGAGCGGAGCCACAACCGAATACTTTTAAGCGTTCTAGTTATGCAAGTGATATCAAGGCGCAAAGTGACGAGACTGAATCTAATGTTACCAGCGCCAATGAAATGATAGAATGTCGGGCATCCGTTATTTCAAATTTTAATAAAGACTTTGATAACTATCCGAAATCAATGAATACAGAAGCGCTCGTTAACGGCCATACGACTAGTGATTTAACAAGTTCCGAGGAAATGAAATCAAATATATTACAAATATTAACACCTATGCTATATCCAGAATATGATGAAAATTTCTGTTGGGTTTCAAAGTTTCCGAAAAAGTGTAAGGACAATAAATTCGAGATAAACCAAATATGTCAGGTGATACCACATCGAGGAATTTTGAAACCGGATGAAATACAATATATACATGTAATATTTAGGCCACCTCCTAATGTTAGCGTTCGCGCTATTTTAGAATGTGAAGTTTTAGGAGGTCCGCCTGAAAGTGTATTAGTCACCGGTCAGAGTTCAGATTTGAGGTATAACATTGATGCGAAGAGAGTAAATTTTGGAATAAGATCTTTTTACGAGAAGGCGTCTTTAAAACTGTCGATATCAAATGTAGCACAGCTGCCGTTTGAACTTAAAACTTATTTAAACGAACCAATGAATGAAAATGTATTTGATGCACTTATAATCGATTTAATACCACAACAGCAGGTATTGGAGCCCGAAGAAATAGCAGATATTAATATACTGGTATATCCTGGAGTGACAGGATGTTTCAATAGAAATTTTCTGTTAGAAATAGGTCATTTACCATATTTTCCGATTGAAGTATGCGGCTGGGGGGTTATTCCTCAAGTTTATATCGTGTTACCGAGACCAGATATTTGTCAATTAAACGTAGAGTTCGGCTATGAAGCAATTTCTACATTAACTTTGGAGTACTTAGAAGCAGTTGGTGAAATTTTCCACAAAAATAATTCAGAACATTTGAACACTCCGCTAGTTGAAAAATGTTTTGAAGATCCATTTTTCCAATGTGATTGGCATATTTGTTCACCTTGGGATTACTTTCCTTCTAAAATGGATATTGAATTAGCAATAGAAAGGAAATTAGTAGTGTACCACTTGAAACAGAGACCAGAAATTTTGAGGGCATATTCAACAAGTAATAAAAATAACTCGATTACTGGATTCAGTACGACACCTTACGTCATTGATTTCGGTGTTGTAATAACGGGTACTACGGTTCACCGAATTATAGAAGTAATCAATTATGGACCGGTTCCTACGAAATTACATTTCGCAAAAGGTACCCAGTTCCCTACTTGGCTGACTATGAAGCTGTGTGGTAAATTAAATCCTGGCGATACGGGAAAACTGGAAGTTGTCTTCTCCCCATCATCTGACGATTTTCCGGAGTTAGAAGATACAGTAGACACTTGTATTTATTCAGAGGTACCATTCGGCGTTACGATACCGATTAAAGTAAAATCTATTTGTGCCGTACCGTATTTAGTATCGAGCGTGAAAGAAATTCATTTTGGATCTGTCCGATGCGGCGATAAGATTATTTGTTCCATACCATTGAAGAATATCGGTAAGCCGACGTGTATTTGGTATGTGACATTAAAGCTTAAAACATCTGGACCGAATCCCATGATGATTTTGGATAGTTCAGGAAAATATGAACCTGGCGAAGGAGGTTGGCTGAGCATCGCATTCAAGCCTACTCTAGAGATGACATATGAAGGAATCTTGATATTTAGATTCCATATGAATCCCAATCGAATGACGATCCCGGTGTATGGACAAGGCGTCGTGCCTCATGTCCACGTGATTGGGCCAAATGTTGATTTCCCACCGACTCTGCCATGGGCTGAAACGAATTATCTATATTTCGGGATTACAAATCCTTGCTCGTTCCCGATCGAAATTATAATCGCACATAGTGATGAGTAA

Protein

MCMKNESVYHDFEEKVKLAKIFYNLKDKESAKSAKLVQYGIMSCEEHERVYTRIFFDEVQALVVDEKLFFQNMHFTINPIKGKLWPNESTDLTVTFAPKELGEINASLYLDIEGVADRVPLTMVGTSMPPLINLNLETLNMDRVYINKTYNYEVVAINRGHINGVIEYKEIPPLFGSVINCIPKRHCLRAGDKETFIVSFCNSNQGPYFEEVNFTIRDTDIVLKLYLKGEVIYPSLTFSLPCLDFGVVSLGVPKTLELDVINESVVQVRASVKISSDGPEISSITLTDYAVASKPKPNVPQWPREFNIEPSNIDMGPESRITLRITLTANLIRTNQTSLEIELEKSDSAPIVLPVVFSAVVPEIVPAQDIKLRACFIDFPYQHEIKITSNQFWGYFTVDEIKEQSTLEVDVAVKECLIEPNSTICLPVTIKTSVLGEQEFIVRLHLFGLTKPIDICRITGCGVRPIVTCSPMALHWGQVKLLTKSQKVLTLCNDSPVTVTFRASLLNKDSHWSIRPSEGYIDPESETDLFFTLYLIDADLYTNKAVIQLEKVKEILVPLSATGIGTSIVVGELQDHIVLGRHFTRVPFTCKVIMENFGTRLHALEWSEHYKAPKNKQPTVSFFTLEPKAFKMGSGEKMELAVSGTSSKITTVKETWYLIGSIEGVNKKELLLECQITAEFVDPNIEISSPVVELQYDHGPYSEYYKLTDIISIKNVAKLPLDLDITVKPPFAIIQKQNTYKIQPDEENLCCCIRYNENDLNLPSINSEYGPRKSQELIDFLTLKPVEPLRLGPLKFFEDIHKIKKAFTLTHSVEERLEDEEIMKLQILFDTTKHSSLKSKVYSDLMKIKFKGHKNKDAIKLIGTVNFPNLLVLSPKVDFQCLLNESVISKTIKIQNVTPLLVCYMLHWKKYVVSNGAEPQPNTFKRSSYASDIKAQSDETESNVTSANEMIECRASVISNFNKDFDNYPKSMNTEALVNGHTTSDLTSSEEMKSNILQILTPMLYPEYDENFCWVSKFPKKCKDNKFEINQICQVIPHRGILKPDEIQYIHVIFRPPPNVSVRAILECEVLGGPPESVLVTGQSSDLRYNIDAKRVNFGIRSFYEKASLKLSISNVAQLPFELKTYLNEPMNENVFDALIIDLIPQQQVLEPEEIADINILVYPGVTGCFNRNFLLEIGHLPYFPIEVCGWGVIPQVYIVLPRPDICQLNVEFGYEAISTLTLEYLEAVGEIFHKNNSEHLNTPLVEKCFEDPFFQCDWHICSPWDYFPSKMDIELAIERKLVVYHLKQRPEILRAYSTSNKNNSITGFSTTPYVIDFGVVITGTTVHRIIEVINYGPVPTKLHFAKGTQFPTWLTMKLCGKLNPGDTGKLEVVFSPSSDDFPELEDTVDTCIYSEVPFGVTIPIKVKSICAVPYLVSSVKEIHFGSVRCGDKIICSIPLKNIGKPTCIWYVTLKLKTSGPNPMMILDSSGKYEPGEGGWLSIAFKPTLEMTYEGILIFRFHMNPNRMTIPVYGQGVVPHVHVIGPNVDFPPTLPWAETNYLYFGITNPCSFPIEIIIAHSDE

Uniprot

A0A2A4JIA0   A0A212FA77   A0A194PP09   A0A2W1BSE4   A0A194QN70   A0A1B6DJT7   + More
S4R9B3   A0A0M9A1Y4   A0A139WH03   A0A1S3EXT0   A0A060VSZ3   A0A1S3MMV0   A0A1S3MN07   G1T0P3   F6RH68   A0A2D0QTQ4   F6SNE8   F6ZLU4   R7TEU8   F1R516   H2YKD6   U3IUQ9  

Pubmed

22118469    26354079    28756777    18362917    19820115    24755649    + More
21993624    19892987    20431018    23254933    23594743   

EMBL

NWSH01001291    PCG71825.1    AGBW02009514    OWR50630.1    KQ459598    KPI94718.1    + More
KZ149933    PZC77251.1    KQ461196    KPJ06425.1    GEDC01011339    JAS25959.1    KQ435792    KOX74283.1    KQ971343    KYB27278.1    FR904294    CDQ57972.1    AAGW02055408    AAGW02055409    AAGW02055410    AAGW02055411    AAGW02055412    AAGW02055413    AAGW02055414    AAGW02055415    AAGW02055416    AAGW02055417    AAMC01003423    AAMC01003424    AAMC01003425    AAMC01003426    AAMC01003427    AAMC01003428    AAMC01003429    AAMC01003430    AAMC01003431    AAMC01003432    AMQN01014785    KB311278    ELT89591.1    BX548070    BX957343    CT025853   

Proteomes

UP000218220    UP000007151    UP000053268    UP000053240    UP000245300    UP000053105    + More
UP000007266    UP000081671    UP000193380    UP000087266    UP000001811    UP000002281    UP000221080    UP000008143    UP000014760    UP000000437    UP000007875   

Pfam

PF17213   Hydin_ADK        + More
PF15780   ASH
PF13855   LRR_8

Interpro

IPR013783   Ig-like_fold        + More
IPR033305   Hydin-like       
IPR008962   PapD-like_sf       
IPR033768   Hydin_ADK       
IPR027417   P-loop_NTPase       
IPR031549   ASH       
IPR032675   LRR_dom_sf       
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR001611   Leu-rich_rpt       
IPR000535   MSP_dom       

SUPFAM

SSF52540   SSF52540        + More
SSF49354   SSF49354       

Gene 3D

2.60.40.10     3.80.10.10    

ProteinModelPortal

A0A2A4JIA0   A0A212FA77   A0A194PP09   A0A2W1BSE4   A0A194QN70   A0A1B6DJT7   + More
S4R9B3   A0A0M9A1Y4   A0A139WH03   A0A1S3EXT0   A0A060VSZ3   A0A1S3MMV0   A0A1S3MN07   G1T0P3   F6RH68   A0A2D0QTQ4   F6SNE8   F6ZLU4   R7TEU8   F1R516   H2YKD6   U3IUQ9  

PDB

2E6J     E-value=0.0436949,     Score=92

KEGG

101742171    K17570 hydrocephalus-inducing protein | (RefSeq) hydrocephalus-inducing protein homolog

GO

GO:0060438   GO:0003341   GO:0021591   GO:1904158   GO:0002064   GO:1990718  

PANTHER

PTHR23053  

Length:

1563

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.11732

Exp number, first 60 AAs:

2e-05

Total prob of N-in:

0.00221

outside

1  -  1563

 

 

Pi

19.887814

Theta

181.878362

Tajima's D

0.632671

CLR

0.912859

CSRT

0.55857207139643

Interpretation

Uncertain