SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02127
Pre Gene Modal
BGIBMGA003164
Annotation
PREDICTED:_hydrocephalus-inducing_protein_homolog_[Bombyx_mori]
Location
Bomo_Chr4(-):12540393-12552002      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 2.665
 

Sequence

CDS
ATGAGCGATGATAACCCTATCGACCTATCGATCTGTATGGATCGAAAACCCGGAAAAAATCCTAAATCTACAACCAAGTCAACAACACCTAAAGAATCTAGTCCGAGGATATTCAGAACGGAAGCTGAAATTATCGCAGATGAAATAATAGCAATGAAAGACCGCCAGGTTGATCCTTTGAAAGAATGTTTGCATGTCTTTGAAAATTTATCAACAGTTACTGAATTCGATAAACATTCGAAGGGCATTATTATCTTTGTACACGGATCTCCATGTGAAGAAATACAATGTCAAGAAATTGCGTACTCAATTGGGAAAAAATTAAAAATTCCAACTATAAATATAGATTTGTGTATTGTCGAAGCACTGTGCACTCTTGAATGTTCAGCAAAAACGCTTATAATGAATGCCCTTAATGAGTGCTACGAAATGTTTCGGAAAAGAACCACTGATCATTTCGCCGATAACGAAAACGATGCCGCTAATGATGAGACTCTGATAGACAATGAAGACGAATTCGACATGATACTTCGGAAATTGCAATATCTAGTTATAAATAAAAACATACCGACGCCAAGATCTAAAGGTAGTGAAAAAAAGAAGAAGAAATCTCCGAACTCCTCAATGACATCGCATTCAGCATTAGGGGCACTTGGCTCCACGACTATGTTCAATATGGACTTAATACAAGAGCTACTGTCAGAATTTTTCGAGCTACCTAAGTTTAATAAAGGCTTTGTAATGGACTCTTTGTCTAGTACAATATTTAACAATCCAGTTTTAGTTTTGACAACGGTTTTGAAATGCAAACATTCAATATGGAACATTCACCTCGTATTGTGTCAGTCGGATTTTAATAAGTGGGCTCAAGCGCACGACGAGTCACAGAGAGAAACGGATTTTCTTGCTGAGAATATTTCTAAAGTGTACGAAGAAAACGAAATTAAAAATATCGTTGAAACTGTAGAAGATATGACAGCGGAGGAATACGAAAATGCACCACCAGAGCTACGGTCGATTTATCAGACGTATGGTTTAGAGGAACGAAGAAAAAAGTACAATATAATAGTAAAACCTGTTAATGAAACAATTAAGAAGGAAAAATTTGCCAAAGAACATAGCAAATCACTTTTGGCGGTTGAAGGCTCAGAGTCCAGGAAAAAAATAAAAAAGGACGACGTGAAAGCGAAACCAACAAGCGAATATTTAGCAATGAATACAAAATATAACGAATATTATAAAAATACGTACGAGAACCTCATTAACATCGCCAACAATTGGATTGTGGAGGACTGCGATGTTGGAACTCCTTTAATAGGATTGAACGGGCAAGTCGTCGGTTCAGCTCAGAAAAAAACAAAAAAGAAATCTGAAGTTCAGATACAGGTATCTGAAGTAAGCATCGCAGAAAGAGGATTTCCATTAACTTTAATTACGTGCCCGTGTCTACGATATAAAGAGGCTGTAGTGAGCATGTTTTCAAAATCGCAACTGGTGCAAGATGCTTTGAAAAGCGAGCAAGATTTTGATATACTAAGCAGTCCAGTGACCCGCAAAGAGTTCACAGTGCTATTGCCGAAAACATTTCCTAAACTATTACACGAAGAATCTCTAGGATGGCATTTTTTAGATGAAGCACCGATTAAGAAATGTGAATGTAATCCCATAAATGATCTCAATTTACTGGACGATGCTACTCAAGATAACGTGTTAAACATTTTAACGAAGTGGCATTGTATTTGTGGTAAAAAGGTAACATCAGCACAAACTTCAACCAGTGAGATACCGTCCGCTTCCATAGAGAAAACAGAGAGTAGTGAATCTGATACGTTTTATCCATTACCACTACGTAGCGTAAAATCCTGTCACGCGCCTGGCGGGCGTCTAGTTCTGCAGCCCGGTGACCTAGTTAGATGCAAATACTCGTTCAGTCCACACGTAGAAGGTAATTTTAGCGTGAAACGCTTCGTCGAAGTAAGCGGGTGGCCTGAATCGAGGGTAACGATCAAAGTTCGAGGAATATGCGATTTGCCTAGACTAGATACTAGACCTAAAAAGATGTTCCAAAATTTTATTCGAAGAACTATGGACGATACAATCTATAAAAAGACTTATTTGGATGACCTTAAAATGTTTCAATTTGGACCAATTTTCATTGGAAATAATAGAATTTACGAAGAAGAATACACAATTTGTCTCCGAAATTCATCATTAATAACCGCAGACGTGGATATAGAATTTTTGGAAGAAACTAGTGTTTTTCAAATAAACAAACAATTTATTCGATTAGAGCCTGGATGTCGCGAAACTGTGATTATTTCAGCGGCTCCTAATGAAGTAGGAACATATAACAGTGTACTGCTATTTTGCATCAAAGATAACCCTGAAGTGATAGCAGTAAACATATCGTGTAGTGGTGTTTTGCCTTCCGTTGAAATATTGCCACTGAATAAATTAATTGAATACGGAAAACATTTACTGTATCGGCGTGAAGATGACAGGTTTATTGTAAGAAACGATTCTATTTTGCCTATAATGTGGAAGATACGAAACGCACAAGAGTTTTTAAAAGATTTCATTATAGCACGTACATCCGGTATAATCGCCAGGCAAGATAACCAAGTTGTGCCGGTGACGTATATAGCTTGTAGTGTTGGCGTCATTTCACACAAACAACTAATAATCGATATTTACGACGAAGAAGGTCGCGGAGAACCCATGATAGTGGATAGCATATATTTATCGGCCGAATGCTATGACGTAATGGTGGATTGCGCTTACGAAAATCCTTCAGAGAATTTCCTAAACTACGGCAACGTAAAAGTCAATTCGACTGTCGTGAGAGAAATGTATCTGTTGAATCGCGGAAAATATAGTATTTATTACAAACTTAAGAAGGTCAAGAATTTTCCGGAACCTTCTTTGCTGCGGTCGTTCGAAGTCGAGCCGGAGTGTGGCGTTATTCCACCAACTTTAAAGCTTATTTCATTAGAATTTGAATGTACCCCTTCAACTTCTGTAAATCTTGTAAAAGAGCCCGCGTACATCTGCACGCTACTTGATAGCAGTAAAAGCCAAGTCGTTGTTGCCAAGTTTCCAGTTTGTGTTACTATCGCATCGTTTTACAACACATTCACTTTGTTTCCACTGGGTGAGTTAAATTTCCACATAATACCAGTTGGTAGTGGCGTTTTGAGAGAAGTAATATTGAACAATACCAGTAAATGTCCCTTTACGTATGAAATCGTGCTGCCATCTCAGTACCAGCTGGATCCCGCAGTCCAGCAACTTCCAACAAAAGGCAAAGACAACAAAATAAAAAATCCTCCAATGAAATGTGGAAATTTTCTGATAATGAACGACGACAATCTTCTTGCACCCGGTACAAGTAAAACGATTCAAATACAATTTTTGGCGACTGCAGCCAAAAAATTCGAAGAAACCATTAGTTTTATAATCAGCGATACTTGCCCAGCAGAGGCACAGGGAGTGCCATTAAAACTAGTTGGGACTGGAGCAATGCCGACTTTAGATATCTGGAATATAGAGACTACTTTTAGAGAACATTTAATTGTAAGAGACTTATCTGAATATAAAGTTCCCGAGTATACAGCGCATTGTGTGTTTGTCGAAAATTCAGTAACATTACATTTCTTCAGTGTAACAGTGAACACTAGTTTCACTGCTGCATTAGATTTGTCTAACAGTGGTCTAGTTGCTTGTGCGTTAACAATGAAATTACAATACCAGTCGAATACGGACAATACGATATTCTCCTTAGATAAATATGAAACCCACATCGAACCATTGACTCATAAAAAGCTTGGTATAATATTTAGGCCGAAAGCTCTTCAGGAATACCGGGCAGTATTAGAGATAAAACTTAAACTGTTAGAAAACCAAGAACAATCGTTTCGGATTTGTTTGATAGGCGAAGGGGTTATACCCAGAATAAAAATTGTAGCACCGTTGTTAAGGCAAAACAGGATTGCGCTCTTAACATTTCCAGTTACCTGTCTAGGGTCGATTAATACTAAAGTCATTCGTTTTAAAAATGTTAGCACTGTAATAAGCGTTGTTGTTTTGAAGATCATAGAACAACAGCATGACCTACGACCAGTGTTCTGGTTATCGACTGCAGCAGATCAAGAAATCGATGTGATTGAAAATTACGACAAATCGAATCTAACAATGATTATAACATTGAAACCTGAAGAAATTGCTACAATTAACGTTAATTATAACCCACTAAAAAAAGGCAAGATTAGTTGCGACGTGAAACTGACTATTGTAGACAATCCTTATGAATATTTCACGGTCTTATGTGAAGGTGAATCCTTTATGGAAGACGTAATACTAATGGGCATAGAAATGCTGCCGATGGATACAGATTTAGAAACTTATCGATATTCCGGTGACGGGACAATGTCAACAGTATCGACTATGGATAGTCGAAAAAAAAGCCGCAGTGCTCCTGTCGATAAAAAGAAATCTAAACAGCTAGAAACACGAAAAACTAAACGAGTGTCAGTAGGCTCTACGAAGCAAAGTGAATGTAGCTTACAAAACGCATGTCTAAAGTATGTCTTAGATTTTGGTGGATGTGAATTGTGTTCATTACAAAAGAGATCCATCATCATGATAAACAATTCGGAAAAAGTTTATAAATTTATTTGGGATAAAGTAGATTATATTGTGGTAAAACCATCAGTTGGTTATATTTCGCCTGGCGAAGAGAAAGATTTGGAAATAATTTTCTTTGCTGGACAACCAGTTGTTATTAAAAAGGAAGTCTTCCATTGTACCCTGACAGTGATAAGCGATGATACACTAGGTGATCTAAACGGTGCCACATGGGATAACCGCCAAACTATAACATTGTTTGACCAAAATATGTGCGTTCCTAACTAA
Protein
MSDDNPIDLSICMDRKPGKNPKSTTKSTTPKESSPRIFRTEAEIIADEIIAMKDRQVDPLKECLHVFENLSTVTEFDKHSKGIIIFVHGSPCEEIQCQEIAYSIGKKLKIPTINIDLCIVEALCTLECSAKTLIMNALNECYEMFRKRTTDHFADNENDAANDETLIDNEDEFDMILRKLQYLVINKNIPTPRSKGSEKKKKKSPNSSMTSHSALGALGSTTMFNMDLIQELLSEFFELPKFNKGFVMDSLSSTIFNNPVLVLTTVLKCKHSIWNIHLVLCQSDFNKWAQAHDESQRETDFLAENISKVYEENEIKNIVETVEDMTAEEYENAPPELRSIYQTYGLEERRKKYNIIVKPVNETIKKEKFAKEHSKSLLAVEGSESRKKIKKDDVKAKPTSEYLAMNTKYNEYYKNTYENLINIANNWIVEDCDVGTPLIGLNGQVVGSAQKKTKKKSEVQIQVSEVSIAERGFPLTLITCPCLRYKEAVVSMFSKSQLVQDALKSEQDFDILSSPVTRKEFTVLLPKTFPKLLHEESLGWHFLDEAPIKKCECNPINDLNLLDDATQDNVLNILTKWHCICGKKVTSAQTSTSEIPSASIEKTESSESDTFYPLPLRSVKSCHAPGGRLVLQPGDLVRCKYSFSPHVEGNFSVKRFVEVSGWPESRVTIKVRGICDLPRLDTRPKKMFQNFIRRTMDDTIYKKTYLDDLKMFQFGPIFIGNNRIYEEEYTICLRNSSLITADVDIEFLEETSVFQINKQFIRLEPGCRETVIISAAPNEVGTYNSVLLFCIKDNPEVIAVNISCSGVLPSVEILPLNKLIEYGKHLLYRREDDRFIVRNDSILPIMWKIRNAQEFLKDFIIARTSGIIARQDNQVVPVTYIACSVGVISHKQLIIDIYDEEGRGEPMIVDSIYLSAECYDVMVDCAYENPSENFLNYGNVKVNSTVVREMYLLNRGKYSIYYKLKKVKNFPEPSLLRSFEVEPECGVIPPTLKLISLEFECTPSTSVNLVKEPAYICTLLDSSKSQVVVAKFPVCVTIASFYNTFTLFPLGELNFHIIPVGSGVLREVILNNTSKCPFTYEIVLPSQYQLDPAVQQLPTKGKDNKIKNPPMKCGNFLIMNDDNLLAPGTSKTIQIQFLATAAKKFEETISFIISDTCPAEAQGVPLKLVGTGAMPTLDIWNIETTFREHLIVRDLSEYKVPEYTAHCVFVENSVTLHFFSVTVNTSFTAALDLSNSGLVACALTMKLQYQSNTDNTIFSLDKYETHIEPLTHKKLGIIFRPKALQEYRAVLEIKLKLLENQEQSFRICLIGEGVIPRIKIVAPLLRQNRIALLTFPVTCLGSINTKVIRFKNVSTVISVVVLKIIEQQHDLRPVFWLSTAADQEIDVIENYDKSNLTMIITLKPEEIATINVNYNPLKKGKISCDVKLTIVDNPYEYFTVLCEGESFMEDVILMGIEMLPMDTDLETYRYSGDGTMSTVSTMDSRKKSRSAPVDKKKSKQLETRKTKRVSVGSTKQSECSLQNACLKYVLDFGGCELCSLQKRSIIMINNSEKVYKFIWDKVDYIVVKPSVGYISPGEEKDLEIIFFAGQPVVIKKEVFHCTLTVISDDTLGDLNGATWDNRQTITLFDQNMCVPN

Summary

Uniprot
A0A2H1WKT1   A0A212FA77   A0A2A4JJ76   A0A194QN70   A0A194PP09  
Pubmed
22118469    26354079   
EMBL
ODYU01009244    SOQ53522.1    AGBW02009514    OWR50630.1    NWSH01001291    PCG71826.1    + More
KQ461196    KPJ06425.1    KQ459598    KPI94718.1   
Proteomes
UP000007151    UP000218220    UP000053240    UP000053268   
Interpro
IPR013783   Ig-like_fold        + More
IPR033305   Hydin-like       
IPR008962   PapD-like_sf       
SUPFAM
SSF49354   SSF49354       
Gene 3D
2.60.40.10    
ProteinModelPortal
A0A2H1WKT1   A0A212FA77   A0A2A4JJ76   A0A194QN70   A0A194PP09  

Ontologies

KEGG
101742171    K17570 hydrocephalus-inducing protein | (RefSeq) hydrocephalus-inducing protein homolog
GO
PANTHER
PTHR23053  

Topology

Length:
1636
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0215999999999999
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00042
outside
1  -  1636
 
 

Population Genetic Test Statistics

Pi
206.530849
Theta
178.316505
Tajima's D
0.315957
CLR
0.458611
CSRT
0.453977301134943
Interpretation
Uncertain
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