Gene

KWMTBOMO02125

Pre Gene Modal

BGIBMGA003164

Annotation

PREDICTED:_hydrocephalus-inducing_protein_homolog_[Bombyx_mori]

Location

Bomo_Chr4(-):12528275-12535572      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.116 PlasmaMembrane   Reliability : 1.367

CDS

ATGTTTATTTCACATTTTAAGGTTTATGAATCACAATGGAAATTCTTGATACCGTCACGAAATCTCGTCATGAACTTACTCATAGTCGGCACTGTCAGAGAACCAGACGTTGTATTTGTACCCACGATTCTGGTCATTAAAAATTCACTGGTTGGCTTCACGAAAACCGACATTGTGATATTACAAAACAATGAAAACGAAAGTTTGAAATTCGAATTTAAAGGTGATTCATTGTGCAACGACTCTGGAAAAACTCCAGTTGTCGTTGAACCCGCGTGCGGGATCATGAAACCAATGTCCGAAACTCCTATTAAAATAATCTACACTCCGATATTGGACGGTCCGTTATCGTTCAAGCTATTCTGTAGCGTGACTCACTTGAAAAAGTTTTTGACTTTGTGCGTGAATGCGCTGAGCTATGAAATAAAACCTAAAGTAACGTATTATTTGATTGGGAACGAACACATTTTGAACAATGATGCGTTAACTAAAATATATTTGGATCAGACTGCGTCGACGTATGAAAGAACAGTACCGTTCACTATAAAAAACGATGGCTCCGCAACTTTCTTTTTCGATTGGCGTTATGATACGAGGGCCGTCAAGAAGTATCTACAAGTCACCGTAGAACCTAAGTGTGGTCACGTAACTCCGAGTGGCGAGGTTGAGTGCGTCCTGTACTTCACACTAAAACAAGTCCCGGTTCAGGCATTCCCTGTTACATTATTTATTTCTGATGGTCCAGAATATAATATATTTTTATATGCTGAAATCGAGAAGCCCTTGTACCATTTCACGTGTATGGATTACGATTTTGGAAAATGTTTCGTGAATGCACCAGACAGTACATACAAGAAAAATATAGCCTTTTGTAACAACGATAAAACCCCTTTGACCATTGATTTGAATTTCAACAATTTACCGGAGTTATACGTCGATTATCCCAAAGTGTCTTGCGTTGAAGCAAATCAAAGATTAAAGATAGCCATTTTCTTCAGACCGAAACAAGTCAGAGAATATGAGTTTAAATTACAATTCTGGGTAAATTCTCTCGTTGAAGAAGTCGTTACCATTAAAGGAGAAGGTGTGCCTTTATTATTCGATCTCTACGAAGGGTGCCAAAAGAGTTTCGATCTTGGACCGGTTAAGCTTGGGGAGAAAATAATTCGTAGAATAGAAGTAATGAACCACAGTAAAATCCCGATCGATGCCAGTTTTATATTCAGAGATATGTATCCCGTTGTGGATAACACGACGATCTCTCAGATAACTAGCGTGTGCCTTAGTCCCAGTAACACGAATATTCAGGCAGATGCGGGCCCATCTAGAGGAAAGATGCTTCAGGACCACAAAAATGACATTGTTACTAATCAAATTGCTATGGACATACAAAATGCTTTATCTTCTTTAAAAGTTATACCAAATAAATGCAAAATAATGCCGCATCGAAAAATACCTCTCAAGATTCAATTTAAGCCACTTGGAATGATTAGTTCATTAAGCGTCCAGTTGAACATGAAAGTTCTTGAATTCGAAAAGCCCCTGGTGCGACTCAGCGGAAGCGCAACGGGCATGAGTCTTTGTTTGAGCCAAAATTCATTACAATTTGGGCGAGTACGTAAACGAGGCTGTAAAGTATTGAAAGTTATGCTGTTGAATAAAGGGGACTTTGGTGCTAGATTTTGGTGGCAGCCTTTGACGTCTGACGAATTTACTATTTCCCCCCAAAAAGGAAACATCGCGGCCCATACAAACGTAACATTCACTATAACTTTTAGACCGCTCAACCACAATCCGTTCATCAAAGTTTGGGCAAGCTGTAACATTGAAAACTTCATGCCACTAGAGTTGGCACTGTACGCGACTTGTGTTGATATAGGGAATGTTCAAAACAAGTCGCTTTACTTGGAATGTCCCGTACGTGAGCTACAGACCGAATATGTGGTGGTCACTAATCCTTCTGATGATCTGTGGCTAGTTTTGTCGGAACTATCTGGTGGCCCATTTGAAACTCTAAAGCAATTCAATGTTGAGCCCAATTCGACCTTTGAAATACCGGTACATTTTAAACCAAAGGCTATTGGAAAACATGAGGTTTGA

Protein

MFISHFKVYESQWKFLIPSRNLVMNLLIVGTVREPDVVFVPTILVIKNSLVGFTKTDIVILQNNENESLKFEFKGDSLCNDSGKTPVVVEPACGIMKPMSETPIKIIYTPILDGPLSFKLFCSVTHLKKFLTLCVNALSYEIKPKVTYYLIGNEHILNNDALTKIYLDQTASTYERTVPFTIKNDGSATFFFDWRYDTRAVKKYLQVTVEPKCGHVTPSGEVECVLYFTLKQVPVQAFPVTLFISDGPEYNIFLYAEIEKPLYHFTCMDYDFGKCFVNAPDSTYKKNIAFCNNDKTPLTIDLNFNNLPELYVDYPKVSCVEANQRLKIAIFFRPKQVREYEFKLQFWVNSLVEEVVTIKGEGVPLLFDLYEGCQKSFDLGPVKLGEKIIRRIEVMNHSKIPIDASFIFRDMYPVVDNTTISQITSVCLSPSNTNIQADAGPSRGKMLQDHKNDIVTNQIAMDIQNALSSLKVIPNKCKIMPHRKIPLKIQFKPLGMISSLSVQLNMKVLEFEKPLVRLSGSATGMSLCLSQNSLQFGRVRKRGCKVLKVMLLNKGDFGARFWWQPLTSDEFTISPQKGNIAAHTNVTFTITFRPLNHNPFIKVWASCNIENFMPLELALYATCVDIGNVQNKSLYLECPVRELQTEYVVVTNPSDDLWLVLSELSGGPFETLKQFNVEPNSTFEIPVHFKPKAIGKHEV

Uniprot

H9J0X7   A0A2W1BSE4   A0A2A4JJ76   A0A212FA77   A0A2H1WKT1   A0A194PP09   + More
A0A194QSA7   A0A0L7LKW4   E0VPS2   A0A310SI90   F1NYR0   A0A1D5P4W4   G1MRN0   A0A091TJ40   G3URZ1   A0A093H3D0   A0A2P4T4Z1   A0A093P5D8   A0A151IJ54   A0A1S3J5T2   A0A091U4X4   A0A151WXJ4   A0A2I0LNC7   A0A087ZUU9   S4R9B3   A0A226MPL8   U3IUQ9   A0A0A0AFS5   A0A0N1ITL4   A0A091WNA9   A0A0Q3WR32   E9J975   A0A158NB93   A0A1V4K2G8   A0A1V4K0Y2   A0A154PQ37   A0A091RXF6   A0A151I3C5   A0A1L8GF33   A0A1L8GF23   A0A1B6FPL6   A0A151MSN1   A0A151MSN2   E2ARG1   A0A151K0U1   A0A3Q0G7E4   F6ZLU4   A0A151JM36   F6RH68   F6SNE8   F6QAQ3   E1BED7   A0A078AWY2   W5P1K1   A0A210QFE7   F4X5N1   A0A341AQ85   A0A1Y1XDW0   A0A2U4BD20   V4BQE4   A0A099ZSX8   A0A340XNV9   G1L6C3   J9IUW8   A0A2Y9P0Z3   G1L6C0   A0A2K5C1C4   G1T0P3   G1L6C1   D2HFV7   A0A337SLB3   A0A2P6NSE8   A0A1Y2BXZ0   C3ZBW1   A0A2Y9E6A0   A0A384D1F4   A0A3Q0E5I8   A0A2Y9SVU2   L9KKN1   A0A1B6CJ37   G1S2C7   A0A1Y1I4A9   A0A1R2BM21   A0A146Y4F6   A0A146Y5L5   A0A146Y414   A0A146Y3S4   A0A146Y5Y7   R7TDL7   A0A146Y5R6   A0A146Y3V4   M7BNE7   A0A2K6BH83   U3C8G1   F7E8Q9   A0A146Y440   A0A2K5WPX1   F6VSU6   G3T094   A0A1Y2BU15  

Pubmed

19121390    28756777    22118469    26354079    26227816    20566863    + More
15592404    20838655    26383154    23371554    21282665    21347285    27762356    22293439    20798317    20431018    19892987    18464734    20809919    28812685    21719571    23254933    20010809    23382650    21993624    17975172    29378020    18563158    23385571    24865297    23624526    25243066    17431167   

EMBL

BABH01010444    KZ149933    PZC77251.1    NWSH01001291    PCG71826.1    AGBW02009514    + More
OWR50630.1    ODYU01009244    SOQ53522.1    KQ459598    KPI94718.1    KQ461196    KPJ06426.1    JTDY01000796    KOB75846.1    DS235371    EEB15378.1    KQ765174    OAD54090.1    AADN05000561    KK455442    KFQ76081.1    KL205731    KFV73572.1    PPHD01008635    POI31443.1    KL225379    KFW71611.1    KQ977412    KYN02890.1    KK415219    KFQ85082.1    KQ982665    KYQ52600.1    AKCR02000174    PKK18919.1    MCFN01000563    OXB57221.1    KL871350    KGL91870.1    KQ435792    KOX74282.1    KL411055    KFR03001.1    LMAW01000459    KQL50268.1    GL769168    EFZ10626.1    ADTU01010652    ADTU01010653    ADTU01010654    ADTU01010655    ADTU01010656    LSYS01005191    OPJ78097.1    OPJ78096.1    KQ435007    KZC13514.1    KK936156    KFQ47220.1    KQ976506    KYM82840.1    CM004473    OCT82470.1    OCT82469.1    GECZ01017623    JAS52146.1    AKHW03005169    KYO27512.1    KYO27513.1    GL442063    EFN63970.1    KQ981225    KYN44368.1    AAMC01003423    AAMC01003424    AAMC01003425    AAMC01003426    AAMC01003427    AAMC01003428    AAMC01003429    AAMC01003430    AAMC01003431    AAMC01003432    KQ978966    KYN26906.1    CCKQ01014030    CDW85762.1    AMGL01028451    AMGL01028452    AMGL01028453    AMGL01028454    AMGL01028455    AMGL01028456    AMGL01028457    AMGL01028458    AMGL01028459    AMGL01028460    NEDP02003910    OWF47429.1    GL888730    EGI58236.1    MCFG01000062    ORX83929.1    KB202284    ESO91099.1    KL897887    KGL84882.1    ACTA01001627    ACTA01137625    ACTA01145624    ACTA01153623    ACTA01161622    ACTA01169620    ACTA01177618    ACTA01185616    ACTA01193614    AMCR01008518    EJY79583.1    AAGW02055408    AAGW02055409    AAGW02055410    AAGW02055411    AAGW02055412    AAGW02055413    AAGW02055414    AAGW02055415    AAGW02055416    AAGW02055417    GL192795    EFB27046.1    AANG04002512    MDYQ01000025    PRP86885.1    MCGO01000039    ORY39534.1    GG666603    EEN50348.1    KB320797    ELW63034.1    GEDC01023880    JAS13418.1    ADFV01127327    ADFV01127328    ADFV01127329    ADFV01127330    ADFV01127331    ADFV01127332    ADFV01127333    ADFV01127334    ADFV01127335    ADFV01127336    DF237179    GAQ85333.1    MPUH01000554    OMJ77837.1    GCES01037457    JAR48866.1    GCES01037458    JAR48865.1    GCES01037459    JAR48864.1    GCES01037453    JAR48870.1    GCES01037456    JAR48867.1    AMQN01014785    KB311278    ELT89592.1    GCES01037451    JAR48872.1    GCES01037452    JAR48871.1    KB554237    EMP29717.1    GAMS01001378    JAB21758.1    GCES01037454    JAR48869.1    AQIA01043520    AQIA01043521    AQIA01043522    AQIA01043523    AQIA01043524    AQIA01043525    AQIA01043526    AQIA01043527    AQIA01043528    AQIA01043529    JSUE03026555    JSUE03026556    JSUE03026557    JSUE03026558    JSUE03026559    JSUE03026560    JSUE03026561    JSUE03026562    JSUE03026563    JSUE03026564    MCOG01000137    ORY38260.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000053240    UP000037510    + More
UP000009046    UP000000539    UP000001645    UP000053584    UP000054081    UP000078542    UP000085678    UP000075809    UP000053872    UP000005203    UP000245300    UP000198323    UP000053858    UP000053105    UP000053283    UP000051836    UP000005205    UP000190648    UP000076502    UP000078540    UP000186698    UP000050525    UP000000311    UP000078541    UP000189705    UP000008143    UP000078492    UP000002281    UP000002279    UP000002356    UP000242188    UP000007755    UP000252040    UP000193944    UP000245320    UP000030746    UP000053641    UP000265300    UP000008912    UP000248483    UP000233020    UP000001811    UP000011712    UP000241769    UP000193642    UP000001554    UP000248480    UP000261680    UP000189704    UP000248484    UP000011518    UP000001073    UP000054558    UP000014760    UP000031443    UP000233120    UP000008225    UP000233100    UP000006718    UP000007646    UP000193920   

PRIDE

H9J0X7   

Pfam

PF15780   ASH        + More
PF17213   Hydin_ADK
PF07177   Neuralized
PF07525   SOCS_box
PF07610   DUF1573
PF01728   FtsJ

Interpro

IPR033305   Hydin-like        + More
IPR013783   Ig-like_fold       
IPR008962   PapD-like_sf       
IPR033768   Hydin_ADK       
IPR031549   ASH       
IPR000399   TPP-bd_CS       
IPR027417   P-loop_NTPase       
IPR006573   NHR_dom       
IPR001496   SOCS_box       
IPR036036   SOCS_box-like_dom_sf       
IPR000535   MSP_dom       
IPR011467   DUF1573       
IPR023591   Ribosomal_S2_flav_dom_sf       
IPR025807   Adrift-typ_MeTrfase       
IPR029063   SAM-dependent_MTases       
IPR002877   rRNA_MeTrfase_FtsJ_dom       

SUPFAM

SSF49354   SSF49354        + More
SSF52540   SSF52540       
SSF158235   SSF158235       
SSF52313   SSF52313       
SSF53335   SSF53335       

Gene 3D

2.60.40.10    

ProteinModelPortal

H9J0X7   A0A2W1BSE4   A0A2A4JJ76   A0A212FA77   A0A2H1WKT1   A0A194PP09   + More
A0A194QSA7   A0A0L7LKW4   E0VPS2   A0A310SI90   F1NYR0   A0A1D5P4W4   G1MRN0   A0A091TJ40   G3URZ1   A0A093H3D0   A0A2P4T4Z1   A0A093P5D8   A0A151IJ54   A0A1S3J5T2   A0A091U4X4   A0A151WXJ4   A0A2I0LNC7   A0A087ZUU9   S4R9B3   A0A226MPL8   U3IUQ9   A0A0A0AFS5   A0A0N1ITL4   A0A091WNA9   A0A0Q3WR32   E9J975   A0A158NB93   A0A1V4K2G8   A0A1V4K0Y2   A0A154PQ37   A0A091RXF6   A0A151I3C5   A0A1L8GF33   A0A1L8GF23   A0A1B6FPL6   A0A151MSN1   A0A151MSN2   E2ARG1   A0A151K0U1   A0A3Q0G7E4   F6ZLU4   A0A151JM36   F6RH68   F6SNE8   F6QAQ3   E1BED7   A0A078AWY2   W5P1K1   A0A210QFE7   F4X5N1   A0A341AQ85   A0A1Y1XDW0   A0A2U4BD20   V4BQE4   A0A099ZSX8   A0A340XNV9   G1L6C3   J9IUW8   A0A2Y9P0Z3   G1L6C0   A0A2K5C1C4   G1T0P3   G1L6C1   D2HFV7   A0A337SLB3   A0A2P6NSE8   A0A1Y2BXZ0   C3ZBW1   A0A2Y9E6A0   A0A384D1F4   A0A3Q0E5I8   A0A2Y9SVU2   L9KKN1   A0A1B6CJ37   G1S2C7   A0A1Y1I4A9   A0A1R2BM21   A0A146Y4F6   A0A146Y5L5   A0A146Y414   A0A146Y3S4   A0A146Y5Y7   R7TDL7   A0A146Y5R6   A0A146Y3V4   M7BNE7   A0A2K6BH83   U3C8G1   F7E8Q9   A0A146Y440   A0A2K5WPX1   F6VSU6   G3T094   A0A1Y2BU15  

KEGG

101742171    K17570 hydrocephalus-inducing protein | (RefSeq) hydrocephalus-inducing protein homolog

GO

GO:0000287   GO:0030976   GO:0035556   GO:1990718   GO:0002064   GO:1904158   GO:0021591   GO:0003341   GO:0060438   GO:0008168  

PANTHER

PTHR23053  

Length:

699

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.144890000000001

Exp number, first 60 AAs:

0.13676

Total prob of N-in:

0.00624

outside

1  -  699

 

 

Pi

203.351492

Theta

186.388939

Tajima's D

0.679866

CLR

0.433163

CSRT

0.564871756412179

Interpretation

Uncertain