SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02122  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA003165
Annotation
PREDICTED:_transmembrane_BAX_inhibitor_motif-containing_protein_5_isoform_X1_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.667
 

Sequence

CDS
ATGTGTATCGGTCGCTCGGCGTTCAATGTAACGCAGAGTCTAAAATCGCCAGTACCACAAAATTTTGTACCGAGAAACTATGTGGTCAGAAATTATGCACGAGAACCTCGAACAAGGGTCGCTACACGCTCACAACCCACACTTCGGGAGAGACTCATGGCACCTGCTGGACCAAATGCATTCAGCTTGGGCAAGGGTGCATTAGCTGGAGCCTCTGCAGTTGGACTAGTTGCTCTGTGCTACTATGGCTCTGGGGTAAAACCAGGTACTCTTCAGGAATCTCACCTTTGGCCACAATATGTGAAAGAACGTATAAAAACAACATATGGATACATCGCGGGTTCTTTGGTGCTGACTGCTGGTAGTGCAGTTGCTGTTTTCAGAACACCCGCACTTCTAAATTTGGTAGCAAGAAATGGATGGATGTCCATTATTGTCACATTGGGTCTGATGATTGGTTCTGGCATGGTAGTAAGAGGAATGGAGTACACACCTGGATTTGGGGCTAAACAATTAGCATGGATGGCGCACACTGGTATTATGGGAGCTGTCATTGCTCCAATTTGCTTCCTTGGTGGCCCAATCCTGATGCGTGCAGCTTGGTACACTGCTGGTGTAGTTGGTGGTCTGAGTACAATTGCAGTGTGTGCACCATCTGGAGAGTTCTTGAACATGCGTGCTCCACTTGCTATGGGTCTAGGAGCTGTGTTTGCTGCATCTCTGGCTGGGATGTTTCTACCACCTACTAGTGCTCTTGGTGCCGGATTGTATTCACTAAGTTTGTATGGTGGCTTAATTGTATTTGGCGGATTTTTATTATACGATACGCAATCTATTATTAAACGCGCCGAGATGCATCCACCCTACGGATTCAAACCATATGACCCAATCAATTCGGCCATATCTGTTTATCTGGATGTTCTGAATATATTCATGAGAATTGCCATGATCTTGTCTGGAGCTGGTGGCAACAGGAGGAAGTAA
Protein
MCIGRSAFNVTQSLKSPVPQNFVPRNYVVRNYAREPRTRVATRSQPTLRERLMAPAGPNAFSLGKGALAGASAVGLVALCYYGSGVKPGTLQESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVAVFRTPALLNLVARNGWMSIIVTLGLMIGSGMVVRGMEYTPGFGAKQLAWMAHTGIMGAVIAPICFLGGPILMRAAWYTAGVVGGLSTIAVCAPSGEFLNMRAPLAMGLGAVFAASLAGMFLPPTSALGAGLYSLSLYGGLIVFGGFLLYDTQSIIKRAEMHPPYGFKPYDPINSAISVYLDVLNIFMRIAMILSGAGGNRRK

Summary

Similarity
Belongs to the BI1 family.
EMBL
DQ311440    ABD36384.1    DQ228724    ABB49054.1    GAIX01014220    JAA78340.1    + More
AGBW02009514    OWR50632.1    KQ459598    KPI94720.1    GDQN01003490    GDQN01002612    JAT87564.1    JAT88442.1    KZ149933    PZC77253.1    NWSH01001291    PCG71828.1    KQ461196    KPJ06428.1    ODYU01012632    SOQ59051.1    BABH01010446    BABH01010447    GFDL01006806    JAV28239.1    GDUN01000347    JAN95572.1    DS231890    EDS43800.1    GANO01003145    JAB56726.1    GALA01001035    JAA93817.1    CVRI01000013    CRK89602.1    GDAI01000723    JAI16880.1    GGLE01000902    MBY05028.1    GFWV01004453    MAA29183.1    GGFJ01007127    MBW56268.1    GGFJ01007126    MBW56267.1    JRES01000994    KNC26341.1    GGFK01004445    MBW37766.1    AXCN02002061    ADMH02001853    ETN60863.1    GAMD01002943    JAA98647.1    GEZM01068062    GEZM01068061    JAV67239.1    KK115857    KFM66226.1    GADI01004385    JAA69423.1    GFDG01001664    JAV17135.1    GFJQ02004221    JAW02749.1    JXUM01103896    GAPW01002435    GAPW01002434    KQ564842    JAC11164.1    KXJ71663.1    GEFM01003055    JAP72741.1    KA646630    AFP61259.1    GEDC01014654    GEDC01006544    JAS22644.1    JAS30754.1    GALA01001010    JAA93842.1    GAMC01001353    GAMC01001352    JAC05203.1    GDHF01006619    GDHF01005245    JAI45695.1    JAI47069.1    GBXI01016495    JAC97796.1    GFAC01000481    JAT98707.1    AXCM01000820    GBBM01001627    JAC33791.1    JO843858    AEO35475.1    AAAB01008980    EAL39226.3    APCN01001715    ATLV01022579    ATLV01022580    KE525333    KFB47823.1    AJWK01024261    GFPF01008177    MAA19323.1    GBBL01001395    JAC25925.1    GEDV01007302    JAP81255.1    GEFH01000563    JAP68018.1    GBBK01002881    JAC21601.1    KQ971343    EFA03190.1    CH964232    EDW81341.1    GBBK01002883    JAC21599.1    KK854831    PTY19088.1    OUUW01000035    SPP89844.1    GFDF01007308    JAV06776.1    CH379064    EDY72523.1    CH479209    EDW32683.1    GBZX01001655    JAG91085.1    DS235045    EEB10939.1    LRGB01003257    KZS03483.1    GDIQ01258423    JAJ93301.1    LJIG01022848    KRT78405.1    AJVK01010693    AJVK01010694    MNPL01011269    OQR72672.1    CH940655    EDW66279.1    CH902621    EDV44510.1    CH480821    EDW55239.1    CH916369    EDV93371.1    NNAY01000372    OXU28818.1    CM000364    EDX11992.1    AE014297    BT082005    AAF54013.2    ACO57624.1    CH954181    EDV48150.1    JR038380    JR038381    AEY58227.1    AEY58228.1    CM000160    EDW96363.1    GL732602    EFX72148.1    AY075204    AAL68072.1    CH933812    EDW06158.1    KRG07164.1    GBGD01002070    JAC86819.1   
Pfam
PF01027   Bax1-I        + More
PF06825   HSBP1
PF00071   Ras
Interpro
IPR006214   Bax_inhibitor_1-related        + More
IPR035871   GHITM       
IPR009643   HS1-bd       
IPR005225   Small_GTP-bd_dom       
IPR030702   Rab14       
IPR001806   Small_GTPase       
IPR027417   P-loop_NTPase       
SUPFAM
SSF52540   SSF52540       

Ontologies

Topology

Length:
327
Number of predicted TMHs:
6
Exp number of AAs in TMHs:
157.30979
Exp number, first 60 AAs:
0.38918
Total prob of N-in:
0.69273
inside
1  -  108
TMhelix
109  -  131
outside
132  -  140
TMhelix
141  -  160
inside
161  -  172
TMhelix
173  -  195
outside
196  -  199
TMhelix
200  -  222
inside
223  -  228
TMhelix
229  -  246
outside
247  -  250
TMhelix
251  -  273
inside
274  -  327
 
 

Population Genetic Test Statistics

Pi
199.466724
Theta
221.312425
Tajima's D
-0.424602
CLR
2.058976
CSRT
0.260336983150842
Interpretation
Possibly Positive selection
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