Gene

KWMTBOMO02121

Pre Gene Modal

BGIBMGA003000

Annotation

PREDICTED:_uncharacterized_protein_LOC106118318_[Papilio_xuthus]

Location

Bomo_Chr4(+):12500463-12509292      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.356

CDS

ATGTTTGGATATAGCAAAGAAGCAGTCAGAGTGAAAGTTAAGAAATGTGAGGGTAAACTCCAGCCAGAGCTGAGGAAGTTCTCAGTTGATCCTCAAATAACATCTTTAGAGGTCTTACAGAGCATTTTAGTTAAGGCATTTGATATTAAATCTGACTTCACCTTATCATACAGAAGTGTTGATGATTATGGACAAGAAATATATTTACCGTTATTATCAGACTGGGACCTGGATGCAGCATTTCTTAAGGCTCATAATATAGCTCTTGGGTTAAGAACAGAACCATGTGTTCTATTGAAAGTCGATATGAAACCTTTCTCGGAAGCCTCTGAAGATTGGGAGCCACCACCTGCTTCTCCAACACCAATAACAAATCATGGTTACAAAGAACAACCTACAGTTGCACCAGTACAGTTGCACCATCAAACAGAGAAACAAGAATCTCAAACTGGTTTTCAAGGACTAATTATGAATCAGGTTGAGAAAACATTCAATATGGTTTCAAGAGCTTTAAATCTATATGAAGATCCTAGCACTCCACCGAGACCACCTCTAAGTGACAATGAGTTTAGAGCTTTCTTAGATGCAGTTGGCCAGATTACTAATCCAACAAAACTAAGAGAAGTAATATACTGTGGAGGTATTGATCCCAGTTTGAGGAAAGTTGTCTGGAAACATATTTTGAATGTATATCCCGAAGGAATGACAGGAAAAGAAAGAATGGACTACATTAAAATGAAAGCGAATGAATATTATTCTCTGAGAACGCGATGGAAAGATTGTATTCAGAAAGGCATGGTAAATGCAGATCTAGCGTACGTTACAAGTATGGTCCGAAAGGATGTTCTCCGGACCGACAGACATCACACATTTTATGCCGGCAGTGACGACAATCAAAACATTGCTTCATTATTTAATATCTTGACAACTTATGCTTTGAATCATCCAACCGTAAGTTATTGTCAAGGCATGTCCGATCTCGCGTCCCCTCTCCTAGTTACAATGGGCGACGAAGCTCACGCGTATATCTGTCTCTGTGCGCTCATGACGCGCCTGTACCCCAACTTCCTTCTAGACGGGGAAGCTATGACCCTAAAATTTTCGCATCTCACCGAATCCCTGCAGGTTTACGATCCGGATTTCTATAATTATTTAAAATTACAACAAGCTGACGATCTGCTGTTCTGTTACCGATGGCTGTTACTGGAAATGAAACGTGAATTTGCTTTCGATGACGCACTAAGAATGCTCGAGGTGCTGTGGGCGTCTTTACCCCAGAAAATTCCAGGGCTCGAATTATCGTTGAAAGAAAAGGAATTCGATCCAGTAGACGATCTGGCCGATGAGCCGCCGCCATCGAGCCCACTACTGAAAACACCTCGTGAAAACGCATACACCAAAGTGTGTGCCATCCGAAGGCAAAGTTCCAGTTTCAGTTTAGCAAATGTAAAAGCCCCAAAGCTCGCTACAAGTAATCAAATGAATCACAGTTTAGACGAGAACGTAACCCGTAAAGTTTCCGTTAATTCGTCGCTAAAACATTCCAAAGAGTTCCAAAGTTTAGATGATGCAACGCTACACATGCAAAACGCCAAATTCGACCGTCACGATGAGTACGCGACTAAAGAGAACGGATTGTCCCCGAAAGATAGTAAAGGTCAAACGAGACGAAGTATGAAAAGTGTTCCGGAAAATACAAAGGCTGAAATTCAAGACACACTGTCCACTGCGTGGTCGAGTACAGGAAATCTAATGAATGGATCTCCTCACGCAGACCCCTCCAAAGAGACACCGCTGGGAAATCAAATAAGAATATTGAGAAATAAAATATCGGTGCATAACAGTAAATTCTTTTCGTCGTTAGAAAAACTGAATGACACCGAGAATTCGGAATTTCCAGAAAAACCCAAAATTAAAATGATCAAAAACCTAAATGAATTCCTTAACTTTGCAACGGGAAGTAAAATCAATACGCAGCACGCCCAATTACAACGAACTAAATCGGCCGTCGACAACGCTTCCTATCTGGATTGTCCAAGAATAACGTTAACAAAAACCGATAATAAAAAGAGATCTTTTAAAGAAGATTCGCTGAAGATGAATATAAACAAGAACACTTGTCCGGAAACCAACGAGGGCAGCAGTCCCGACGATTCTCAGGAATATTATCCAATGAACACTTCCATGACGAGGGAGCTAAGACTAGAACTAGAACATTTAGATCGACAAGTTTTCGGACCATCGTACATTAATCGGCGCAGTATGTTATGCGATTCGCCTTCCGATTCGTTTAGCGTCGACGATAAATTAAGTATCAATCAATTTAAAGAAGTGAAACCGGAATGTAGAACTAGCGATGTTTTAGATCCGCACATAGAAGTTACAGAAGTAAAAGAAATGGTAAAGAAGTCGCCGCTACTCGAAACAGGAAAGTCAAACGCGAGAAGCGCTGAAGATATATATTTATGGGAAAACCCGTTACACAGGAACACACCAACGACGAGGACATCGGCCAGCTGTCCTCAAACTCCTGACGAACAAGCCGATCTCGACTTCGACGGTGATACAGGAGAAATAATCGAAGAACATTTCGGAAAAAAGTCTGTTACACCAATCAAATTATTAAGAAAAATTCAATCGGCTGATGCTCACGACTCCTTTAAGATAACTAAACAAAGTGATGTTAACTCGAGTAATTCTGACGTGTCCGACAAACACGTGACTCAGTTAGAAGAAATACAATCAATGAACAATCAACAAGAGATATCGAACAATTCGAGATCACAGAATTTCTTCTCTAGTATGTCACAAGAATTGGAGAATGCAAGAAAAAATTGCGAATCGTTGTTGAGCGTGAGGCAGCCCAATTTGCATAGCGTCGCATCAACTATCAACAATTTCCAGAAGAAGTACGAAGTTTTGAAGCCGCCCCCGCAAAGAAATACTAACGTATCTCCGATCGTTGGCGATGCTTCAACAAAAACTAGTATAAGTAGTCTTCCACCTCCCGCTGTGTTCGGAGGAGGAAATCCATTTTTGATGTTCCTATGCCTAACGGTCCTGCTACAACACAGGGACTACATAATGAGAAACCGTATGGACTATAACGAGTTAGCGATGCATTTTGACAAAATGGTTCGTAAACATAATGTAAACAGGGTGTTGAACCAGGCTCGGCAAATGTATGCGATCTATTTAAAACATCAAGCACATAAAATCGCCGACGTTGCTACCTGGCCTATAATGTATCCAGATGATCAGATTATGTATTACAAGCCTATCTGCAAGAAGAATGTACTATGA

Protein

MFGYSKEAVRVKVKKCEGKLQPELRKFSVDPQITSLEVLQSILVKAFDIKSDFTLSYRSVDDYGQEIYLPLLSDWDLDAAFLKAHNIALGLRTEPCVLLKVDMKPFSEASEDWEPPPASPTPITNHGYKEQPTVAPVQLHHQTEKQESQTGFQGLIMNQVEKTFNMVSRALNLYEDPSTPPRPPLSDNEFRAFLDAVGQITNPTKLREVIYCGGIDPSLRKVVWKHILNVYPEGMTGKERMDYIKMKANEYYSLRTRWKDCIQKGMVNADLAYVTSMVRKDVLRTDRHHTFYAGSDDNQNIASLFNILTTYALNHPTVSYCQGMSDLASPLLVTMGDEAHAYICLCALMTRLYPNFLLDGEAMTLKFSHLTESLQVYDPDFYNYLKLQQADDLLFCYRWLLLEMKREFAFDDALRMLEVLWASLPQKIPGLELSLKEKEFDPVDDLADEPPPSSPLLKTPRENAYTKVCAIRRQSSSFSLANVKAPKLATSNQMNHSLDENVTRKVSVNSSLKHSKEFQSLDDATLHMQNAKFDRHDEYATKENGLSPKDSKGQTRRSMKSVPENTKAEIQDTLSTAWSSTGNLMNGSPHADPSKETPLGNQIRILRNKISVHNSKFFSSLEKLNDTENSEFPEKPKIKMIKNLNEFLNFATGSKINTQHAQLQRTKSAVDNASYLDCPRITLTKTDNKKRSFKEDSLKMNINKNTCPETNEGSSPDDSQEYYPMNTSMTRELRLELEHLDRQVFGPSYINRRSMLCDSPSDSFSVDDKLSINQFKEVKPECRTSDVLDPHIEVTEVKEMVKKSPLLETGKSNARSAEDIYLWENPLHRNTPTTRTSASCPQTPDEQADLDFDGDTGEIIEEHFGKKSVTPIKLLRKIQSADAHDSFKITKQSDVNSSNSDVSDKHVTQLEEIQSMNNQQEISNNSRSQNFFSSMSQELENARKNCESLLSVRQPNLHSVASTINNFQKKYEVLKPPPQRNTNVSPIVGDASTKTSISSLPPPAVFGGGNPFLMFLCLTVLLQHRDYIMRNRMDYNELAMHFDKMVRKHNVNRVLNQARQMYAIYLKHQAHKIADVATWPIMYPDDQIMYYKPICKKNVL

Uniprot

H9J0G3   A0A2A4JIN6   A0A2W1BUD7   A0A2H1X1C3   A0A194PMR2   A0A194QM39   + More
A0A212FA85   A0A0L7L8X8   A0A2A4JJ32   A0A2J7RJH8   A0A2J7RJI2   D6WJS0   A0A1B0CGD1   A0A1Y1JYS0   A0A2J7RJH6   N6TXM3   A0A1B0EZQ1   A0A067R332   A0A088ATG3   A0A2A3EGR1   E2B7A6   A0A154NX66   A0A3L8DWN9   A0A026WR85   A0A195BMV3   A0A158NZV4   E2A891   A0A310SF91   A0A151J2U9   A0A0M8ZV66   A0A0L7R9M6   A0A195CLZ9   A0A195F237   A0A336MBS3   A0A151XBB5   A0A0M3QV85   A0A336MFV2   B4P895   B4QGF8   B3NQE8   A0A2P8YED0   Q5BI03   A0A0J7LAM1   B4HS27   A0A1W4WCJ8   Q293C6   B4GBW7   E0VC34  

Pubmed

19121390    28756777    26354079    22118469    26227816    18362917    + More
19820115    28004739    23537049    24845553    20798317    30249741    24508170    21347285    17994087    17550304    22936249    29403074    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    15632085    20566863   

EMBL

BABH01010447    BABH01010448    NWSH01001291    PCG71831.1    KZ149933    PZC77254.1    + More
ODYU01012632    SOQ59052.1    KQ459598    KPI94721.1    KQ461196    KPJ06429.1    AGBW02009514    OWR50633.1    JTDY01002298    KOB71711.1    PCG71829.1    NEVH01002992    PNF40984.1    PNF40988.1    KQ971343    EFA04487.1    AJWK01011026    GEZM01096974    JAV54474.1    PNF40986.1    APGK01057245    APGK01057246    APGK01057247    APGK01057248    KB741279    ENN71042.1    AJVK01017742    KK852944    KDR13484.1    KZ288253    PBC30955.1    GL446154    EFN88391.1    KQ434777    KZC04193.1    QOIP01000003    RLU24861.1    KK107144    EZA57594.1    KQ976440    KYM86497.1    ADTU01005012    GL437497    EFN70357.1    KQ761797    OAD56786.1    KQ980404    KYN16202.1    KQ435853    KOX70666.1    KQ414621    KOC67572.1    KQ977580    KYN01756.1    KQ981856    KYN34640.1    UFQT01000729    SSX26771.1    KQ982330    KYQ57671.1    CP012524    ALC41979.1    UFQS01000786    UFQT01000786    SSX06873.1    SSX27217.1    CM000158    EDW91135.1    CM000362    CM002911    EDX07196.1    KMY93965.1    CH954179    EDV55924.1    PYGN01000662    PSN42621.1    AE013599    BT021421    AAF58149.3    AAX33569.1    LBMM01000101    KMR04947.1    CH480816    EDW47974.1    CM000071    EAL24685.2    CH479181    EDW31346.1    DS235045    EEB10940.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000037510    + More
UP000235965    UP000007266    UP000092461    UP000019118    UP000092462    UP000027135    UP000005203    UP000242457    UP000008237    UP000076502    UP000279307    UP000053097    UP000078540    UP000005205    UP000000311    UP000078492    UP000053105    UP000053825    UP000078542    UP000078541    UP000075809    UP000092553    UP000002282    UP000000304    UP000008711    UP000245037    UP000000803    UP000036403    UP000001292    UP000192221    UP000001819    UP000008744    UP000009046   

PRIDE

H9J0G3    Q5BI03   

Pfam

PF00566   RabGAP-TBC

Interpro

IPR035969   Rab-GTPase_TBC_sf        + More
IPR000195   Rab-GTPase-TBC_dom       

SUPFAM

SSF47923   SSF47923       

ProteinModelPortal

H9J0G3   A0A2A4JIN6   A0A2W1BUD7   A0A2H1X1C3   A0A194PMR2   A0A194QM39   + More
A0A212FA85   A0A0L7L8X8   A0A2A4JJ32   A0A2J7RJH8   A0A2J7RJI2   D6WJS0   A0A1B0CGD1   A0A1Y1JYS0   A0A2J7RJH6   N6TXM3   A0A1B0EZQ1   A0A067R332   A0A088ATG3   A0A2A3EGR1   E2B7A6   A0A154NX66   A0A3L8DWN9   A0A026WR85   A0A195BMV3   A0A158NZV4   E2A891   A0A310SF91   A0A151J2U9   A0A0M8ZV66   A0A0L7R9M6   A0A195CLZ9   A0A195F237   A0A336MBS3   A0A151XBB5   A0A0M3QV85   A0A336MFV2   B4P895   B4QGF8   B3NQE8   A0A2P8YED0   Q5BI03   A0A0J7LAM1   B4HS27   A0A1W4WCJ8   Q293C6   B4GBW7   E0VC34  

PDB

5TUC     E-value=8.31617e-46,     Score=467

KEGG

101737598    no KO assigned | (RefSeq) uncharacterized LOC101737598

GO

GO:0005776   GO:1901096   GO:0017137   GO:0006886   GO:0005096   GO:0090630   GO:0008340   GO:0007298   GO:0043087  

Length:

1100

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

15.56638

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00013

outside

1  -  1100

 

 

Pi

183.171956

Theta

157.778817

Tajima's D

0.303389

CLR

0.63075

CSRT

0.459427028648568

Interpretation

Possibly Positive selection