Gene

KWMTBOMO02118

Pre Gene Modal

BGIBMGA002999

Annotation

hypothetical_protein_KGM_01625_[Danaus_plexippus]

Location

Bomo_Chr4(+):12481413-12484322      View in EpiBrowser

Full name

Tetraspanin      

Location in the cell

PlasmaMembrane   Reliability : 4.239

CDS

ATGGGAAATCAATTTAAGAACGTGGCGGTCATCGCCTGCTTGAAGACTTTTCTTTTCGTTTTCAATGTTGTGTTTTGGTTAACTGGGCTACTACTGTTGGTGGTAGGACTATGGGCAGAGTTCGATCTACATAAATACCTGGAACTCTCACCGGAGTTCTCCGGGACAGCTCCTCATGTCATGATTGGAATCGCCGGCTTAATCGTACTGATCAGTTCCGTGGCCTTTTCCTGTATCATCAAAGGACAACCCGTCTTGCTTTACATCTACGGTGGTTTCTTGGCATGCATATTTATGATGGAAGCCGGCGTTGGAGCTTCTGTAGCATGTTACCGCGACACCTTCGCTAAGGGTCTTCGCGACGGACTTACCGAAACAATTACTCACTACAACCCACAGAAAGCAAACTTTGATTTCGCGCAAACCAAGTTGCATTGCTGTGGCGTAAATAACTACACGGACTGGATGAGGATGTCGCCACAGCGCGTGATCCCTATCTCCTGCTGCGTAGACGCTAATAACTGCGTCACGGCCAATTACAGCGAAGTCCATCAAAAGACAAAAATAAACATAGTAAAAGATAGCTTCACTTTCGAATGA

Protein

MGNQFKNVAVIACLKTFLFVFNVVFWLTGLLLLVVGLWAEFDLHKYLELSPEFSGTAPHVMIGIAGLIVLISSVAFSCIIKGQPVLLYIYGGFLACIFMMEAGVGASVACYRDTFAKGLRDGLTETITHYNPQKANFDFAQTKLHCCGVNNYTDWMRMSPQRVIPISCCVDANNCVTANYSEVHQKTKINIVKDSFTFE

Similarity

Belongs to the tetraspanin (TM4SF) family.

Uniprot

H9J0G2   A0A212FA61   A0A2A4JK78   A0A2H1V280   A0A2W1BX49   A0A194PP14   + More
A0A194QSB2   A0A0L7L883   D6WNZ1   A0A2J7RAC0   A0A1Y1LWZ5   A0A1B0D099   U4TY90   U5EVC2   A0A0T6BC03   A0A2P8XHC9   K7IRI9   A0A087UPS1   A0A1D2NHQ3   A0A2L2YQI9   T1IN95   A0A1J1IQH4   A0A2P6KYT6   A0A2T7NC29   E9IK86   E2BKP2   A0A0C9QX11   V3ZNB1   C3YK57   A0A088ABB0   K1Q8A5   A0A2A3E0X8   V9ICQ6   Q2TCS1   A0A0M9ABC1   A0A0L7QW36   A0A151XG20   A0A195CTI3   A0A151IXH2   F4WYM6   A0A2C9LYG3   A0A210QYA5   A0A3P9BIC1   A0A3P8N992   A0A3B4FXW5   A0A2R5LE09   A0A195BY00   A0A154P8E8   A0A0L8I669   E2AFI6   A0A0L0CFQ3   T1FN76   N6TLA3   A0A195F0D5   A0A146X6Y6   A0A1S3JDE5   R7UTH9   A0A146X895   A0A0C9RC81   A0A034WAS6   I3J346   A0A060X046   A0A3B3VI42   A0A147ACX0   A0A3B1JWB4   A0A3B4X585   A0A3B4T5K5   A0A1A8MND5   A0A3P8SA18   I3JHY6   A0A3B3DL88   A0A060WYB6   A0A3B4CRH3   A0A1A8G6E6   A0A3B4G2L7   A0A3P8RGM8   A0A3P9D4U8   A0A1A8B5H4   A0A3B3DL83   K4GIK4   E9FX18   A0A146MK15   A0A1S3MSP3   A0A1S3RSG3   K4FUU5   H2M7Y3   A0A3P9M7E8   A0A3P9I500   A0A2U9C8B9   A0A0C9Q8W8   A0A3B3DJ63   A0A3B3IC82   V9KQW5   A0A3P9I5F1   A0A3B3I5I1   H2L751  

Pubmed

19121390    22118469    28756777    26354079    26227816    18362917    + More
19820115    28004739    23537049    29403074    20075255    27289101    26561354    21282665    20798317    23254933    18563158    22992520    16242907    21719571    15562597    28812685    25186727    26108605    25348373    24755649    25329095    29451363    23056606    21292972    17554307    24402279   

EMBL

BABH01010450    BABH01010451    AGBW02009514    OWR50635.1    NWSH01001291    PCG71833.1    + More
ODYU01000329    SOQ34876.1    KZ149933    PZC77256.1    KQ459598    KPI94723.1    KQ461196    KPJ06431.1    JTDY01002298    KOB71712.1    KQ971343    EFA04407.1    NEVH01006574    PNF37775.1    GEZM01049034    GEZM01049033    JAV76156.1    AJVK01002291    KB630971    KB631830    KB632086    ERL83974.1    ERL86589.1    ERL88647.1    GANO01001942    JAB57929.1    LJIG01002080    KRT84860.1    PYGN01002128    PSN31396.1    KK120917    KFM79360.1    LJIJ01000036    ODN04781.1    IAAA01045326    LAA10366.1    JH431152    CVRI01000055    CRL01350.1    MWRG01003527    PRD31487.1    PZQS01000014    PVD18718.1    GL763924    EFZ19049.1    GL448819    EFN83740.1    GBYB01005217    JAG74984.1    KB202014    ESO92848.1    GG666520    EEN59514.1    JH816697    EKC25090.1    KZ288469    PBC25367.1    JR038403    AEY58241.1    AY955263    AAY53605.1    KQ435692    KOX81047.1    KQ414716    KOC62827.1    KQ982174    KYQ59342.1    KQ977304    KYN03802.1    KQ980809    KYN12724.1    GL888453    EGI60714.1    NEDP02001253    OWF53682.1    GGLE01003644    MBY07770.1    KQ976394    KYM93170.1    KQ434844    KZC08195.1    KQ416546    KOF96520.1    GL439108    EFN67879.1    JRES01000453    KNC31071.1    AMQM01005151    KB096830    ESO01092.1    APGK01032329    APGK01032330    APGK01032331    KB740839    ENN78758.1    KQ981880    KYN33938.1    GCES01048445    JAR37878.1    AMQN01000981    KB298217    ELU09463.1    GCES01048444    JAR37879.1    GBYB01010717    JAG80484.1    GAKP01008044    GAKP01008043    JAC50908.1    AERX01013175    FR904845    CDQ72622.1    GCES01010321    JAR76002.1    HAEF01016775    SBR57934.1    AERX01026718    FR904698    CDQ70069.1    HAEB01019412    SBQ65939.1    HADY01023451    SBP61936.1    JX212614    AFM90928.1    GL732526    EFX87992.1    GCES01166767    JAQ19555.1    JX053146    AFK11374.1    CP026255    AWP11869.1    GBYB01010718    JAG80485.1    JW868218    AFP00736.1   

Proteomes

UP000005204    UP000007151    UP000218220    UP000053268    UP000053240    UP000037510    + More
UP000007266    UP000235965    UP000092462    UP000030742    UP000245037    UP000002358    UP000054359    UP000094527    UP000183832    UP000245119    UP000008237    UP000030746    UP000001554    UP000005203    UP000005408    UP000242457    UP000053105    UP000053825    UP000075809    UP000078542    UP000078492    UP000007755    UP000076420    UP000242188    UP000265160    UP000265100    UP000261460    UP000078540    UP000076502    UP000053454    UP000000311    UP000037069    UP000015101    UP000019118    UP000078541    UP000085678    UP000014760    UP000005207    UP000193380    UP000261500    UP000018467    UP000261360    UP000261420    UP000265080    UP000261560    UP000261440    UP000000305    UP000087266    UP000001038    UP000265180    UP000265200    UP000246464   

PRIDE

H9J0G2   

Pfam

PF00335   Tetraspanin

Interpro

IPR018499   Tetraspanin/Peripherin        + More
IPR000301   Tetraspanin       
IPR008952   Tetraspanin_EC2_sf       
IPR018503   Tetraspanin_CS       

SUPFAM

SSF48652   SSF48652       

Gene 3D

1.10.1450.10    

ProteinModelPortal

H9J0G2   A0A212FA61   A0A2A4JK78   A0A2H1V280   A0A2W1BX49   A0A194PP14   + More
A0A194QSB2   A0A0L7L883   D6WNZ1   A0A2J7RAC0   A0A1Y1LWZ5   A0A1B0D099   U4TY90   U5EVC2   A0A0T6BC03   A0A2P8XHC9   K7IRI9   A0A087UPS1   A0A1D2NHQ3   A0A2L2YQI9   T1IN95   A0A1J1IQH4   A0A2P6KYT6   A0A2T7NC29   E9IK86   E2BKP2   A0A0C9QX11   V3ZNB1   C3YK57   A0A088ABB0   K1Q8A5   A0A2A3E0X8   V9ICQ6   Q2TCS1   A0A0M9ABC1   A0A0L7QW36   A0A151XG20   A0A195CTI3   A0A151IXH2   F4WYM6   A0A2C9LYG3   A0A210QYA5   A0A3P9BIC1   A0A3P8N992   A0A3B4FXW5   A0A2R5LE09   A0A195BY00   A0A154P8E8   A0A0L8I669   E2AFI6   A0A0L0CFQ3   T1FN76   N6TLA3   A0A195F0D5   A0A146X6Y6   A0A1S3JDE5   R7UTH9   A0A146X895   A0A0C9RC81   A0A034WAS6   I3J346   A0A060X046   A0A3B3VI42   A0A147ACX0   A0A3B1JWB4   A0A3B4X585   A0A3B4T5K5   A0A1A8MND5   A0A3P8SA18   I3JHY6   A0A3B3DL88   A0A060WYB6   A0A3B4CRH3   A0A1A8G6E6   A0A3B4G2L7   A0A3P8RGM8   A0A3P9D4U8   A0A1A8B5H4   A0A3B3DL83   K4GIK4   E9FX18   A0A146MK15   A0A1S3MSP3   A0A1S3RSG3   K4FUU5   H2M7Y3   A0A3P9M7E8   A0A3P9I500   A0A2U9C8B9   A0A0C9Q8W8   A0A3B3DJ63   A0A3B3IC82   V9KQW5   A0A3P9I5F1   A0A3B3I5I1   H2L751  

KEGG

101737877    K06571 tetraspanin-7 | (RefSeq) tetraspanin-7-like

GO

GO:0016021   GO:0005887   GO:0030150   GO:0006355   GO:0009072   GO:0003824   GO:0006520   GO:0008483   GO:0006418   GO:0016507   GO:0048384  

Subcellular location

Membrane  

Length:

199

Number of predicted TMHs:

3

Exp number of AAs in TMHs:

67.6032500000001

Exp number, first 60 AAs:

25.86044

Total prob of N-in:

0.99962

POSSIBLE N-term signal

sequence

inside

1  -  16

TMhelix

17  -  39

outside

40  -  58

TMhelix

59  -  80

inside

81  -  86

TMhelix

87  -  109

outside

110  -  199

 

 

Pi

175.580505

Theta

197.788411

Tajima's D

-0.379772

CLR

137.243944

CSRT

0.274336283185841

Interpretation

Uncertain