Gene

KWMTBOMO02117

Pre Gene Modal

BGIBMGA003167

Annotation

PREDICTED:_uncharacterized_protein_LOC106143669_[Amyelois_transitella]

Location

Bomo_Chr4(-):12461265-12479522      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.566 PlasmaMembrane   Reliability : 1.629

CDS

ATGTCAAATTATTTAAATATTATTATAATTGGATTTTTTTATTTAATAACATCTGGTTCTTCGATTCCCGAAATTGAAGACAATGAAGATGTGCTGCATTTAATAGGAGAGCCGGACTTTCGAGATGTGCGACTCCGTTGGGAATATGGCAAAGTTGATGAGAAAGATAGACCGAAACTTCTAGCGTTTCAAGTACACTACTGTGAACTTCAAGCCTGGGGACATTCCCGATGTCGTACGAAGGTCATAGATAACTTGGTGGAGGAGATGTCCACGAGTAGTACAATAGATACATCAACAACGACATCGGGTCCGGTTGCGCGCCGCGGTCGTGCATACAGCACACGCATCACCGGCCTGCGCATGGCCACCACATACTCATTCGAAGTGCGTCCTGTGAGGCGAGACGCACGCGACCTCGCCGACCCGCAGTCGATTGGATCGAAAATCATCATTGTGCCCACAAGAGGATTTTCAGCCCGAGCTATCCAGTGCTTACCCCACGCGAGCGAAGTGGAAGTGTCGACGGGACCTTATTTTGGCGGTCGCATAGCCGTCGAGGCAGCGGACGGCGGCCCAGAGCGGTGCTCCATACGAGGCAATCCCAACAGCGCACAAGACGCATACATTTTACGCATCCATCACGACGAGTGCGGGTCCGACGTGAACGAGACAACCGTTGCTACATACGTTATCGTTCAAGAGAACCTGCCTATTCTAACCCATAGCACACGACGTTTCCTTGTAATATGCACGTATAAGCCGGAGACGTTGACAGTGCGAGCGGGCATTAATTTACCTAAGTCTAGCCCCGGAGATGTCCTGAATAGTTTCAATTCTCATCACACAGGCGATGTGGAGCCTTTTGAGAATCAAGATATGGACTATAATGAACTCCGACCAGCGAGACTTGAAGCCATAAAGGAAGAAACTAAATCAGGTGGTTATAGTGAGATCACTTTGGTAATGTTTTTGGTTGTAGCTGCTTTCGGGGGAATAGCTTTATTAATATGGAAAGTTGTCCCACAAAGCGCCAAAGACAACGCTTCTGCATCGACAATATCCTCTTTATCTCCTACCAGTATATTTAACAGGCGAAACAGAGACAGATTTTCAGACCACGGTTCTATTTACTCAATCACGTTATCAGATAAAGATGCGGTGGTGCAGAAGCCGACTGAAGCTGACAATACTTCAGAAGCGTGA

Protein

MSNYLNIIIIGFFYLITSGSSIPEIEDNEDVLHLIGEPDFRDVRLRWEYGKVDEKDRPKLLAFQVHYCELQAWGHSRCRTKVIDNLVEEMSTSSTIDTSTTTSGPVARRGRAYSTRITGLRMATTYSFEVRPVRRDARDLADPQSIGSKIIIVPTRGFSARAIQCLPHASEVEVSTGPYFGGRIAVEAADGGPERCSIRGNPNSAQDAYILRIHHDECGSDVNETTVATYVIVQENLPILTHSTRRFLVICTYKPETLTVRAGINLPKSSPGDVLNSFNSHHTGDVEPFENQDMDYNELRPARLEAIKEETKSGGYSEITLVMFLVVAAFGGIALLIWKVVPQSAKDNASASTISSLSPTSIFNRRNRDRFSDHGSIYSITLSDKDAVVQKPTEADNTSEA

Uniprot

H9J0Y0   A0A2W1BVN2   A0A2A4JJR8   A0A2H1V210   A0A194QLM1   A0A194PPR5   + More
A0A212ESS2   A0A2P8Z5U2   A0A2J7RJB8   A0A0T6BFJ4   U4U1X1   A0A1Y1L9R1   N6UC58   A0A1B6DKX1   A0A1B6DHR1   W5J4C7   A0A182W9U7   A0A182TL67   A0A182UG04   A0A182NE88   A0A182WTD5   A0A182L290   A0A182HVC8   Q7Q3H5   A0A182UMU2   A0A1S4GWI0   A0A1A9Y5K4   B4IFB6   B4QAJ2   A0A0Q5VLD0   Q9VIM8   B3NM20   B4PBK1   B4GSU7   Q29KT2   A0A3B0KDS0   A0A1B0A498   A0A1B0FQF5   B3MK55   W8AT52   A0A034VEJ0   A0A0A1XN46   A0A147BGP9  

Pubmed

19121390    28756777    26354079    22118469    29403074    23537049    + More
28004739    20920257    23761445    20966253    12364791    17994087    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    15632085    24495485    25348373    25830018    29652888   

EMBL

BABH01010452    KZ149933    PZC77257.1    NWSH01001291    PCG71834.1    ODYU01000329    + More
SOQ34877.1    KQ461196    KPJ06432.1    KQ459598    KPI94724.1    AGBW02012723    OWR44542.1    PYGN01000183    PSN51857.1    NEVH01002993    PNF40928.1    LJIG01000832    KRT86108.1    KB631904    ERL87067.1    GEZM01062630    JAV69571.1    APGK01040712    APGK01040713    KB740984    ENN76237.1    GEDC01010962    JAS26336.1    GEDC01012116    JAS25182.1    ADMH02002093    ETN59307.1    APCN01002505    AAAB01008964    EAA12803.4    CH480833    EDW46338.1    CM000361    CM002910    EDX05609.1    KMY91156.1    CH954179    KQS61836.1    AE014134    AY122225    AAF53889.2    AAM52737.1    EDV54556.1    CM000158    EDW90515.1    CH479189    EDW25456.1    CH379061    EAL33092.2    OUUW01000006    SPP81808.1    CCAG010007261    CH902620    EDV31473.1    GAMC01018707    JAB87848.1    GAKP01017266    JAC41686.1    GBXI01011219    GBXI01009852    GBXI01001538    JAD03073.1    JAD04440.1    JAD12754.1    GEGO01005772    JAR89632.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000245037    + More
UP000235965    UP000030742    UP000019118    UP000000673    UP000075920    UP000075902    UP000075884    UP000076407    UP000075882    UP000075840    UP000007062    UP000075903    UP000092443    UP000001292    UP000000304    UP000008711    UP000000803    UP000002282    UP000008744    UP000001819    UP000268350    UP000092445    UP000092444    UP000007801   

PRIDE

H9J0Y0    Q9VIM8   

Interpro

IPR003961   FN3_dom        + More
IPR013783   Ig-like_fold       
IPR001507   ZP_dom       

Gene 3D

2.60.40.10    

CDD

cd00063  FN3

ProteinModelPortal

H9J0Y0   A0A2W1BVN2   A0A2A4JJR8   A0A2H1V210   A0A194QLM1   A0A194PPR5   + More
A0A212ESS2   A0A2P8Z5U2   A0A2J7RJB8   A0A0T6BFJ4   U4U1X1   A0A1Y1L9R1   N6UC58   A0A1B6DKX1   A0A1B6DHR1   W5J4C7   A0A182W9U7   A0A182TL67   A0A182UG04   A0A182NE88   A0A182WTD5   A0A182L290   A0A182HVC8   Q7Q3H5   A0A182UMU2   A0A1S4GWI0   A0A1A9Y5K4   B4IFB6   B4QAJ2   A0A0Q5VLD0   Q9VIM8   B3NM20   B4PBK1   B4GSU7   Q29KT2   A0A3B0KDS0   A0A1B0A498   A0A1B0FQF5   B3MK55   W8AT52   A0A034VEJ0   A0A0A1XN46   A0A147BGP9  

KEGG

101738011    no KO assigned | (RefSeq) uncharacterized LOC101738011

GO

GO:0016021  

SignalP

Position:   1 - 21,         Likelihood:  0.739969

 

 

Length:

401

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

27.21586

Exp number, first 60 AAs:

5.5937

Total prob of N-in:

0.29748

outside

1  -  318

TMhelix

319  -  341

inside

342  -  401

 

 

Pi

194.314487

Theta

176.409492

Tajima's D

0.114359

CLR

0.115966

CSRT

0.40197990100495

Interpretation

Uncertain