Silkworm Genome Informatics Database

Gene

KWMTBOMO02110

Pre Gene Modal

BGIBMGA003170

Annotation

PREDICTED:_hemocyte_protein-glutamine_gamma-glutamyltransferase-like_[Amyelois_transitella]

Location

Bomo_Chr4(-):12372159-12376252 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.724

CDS

ATGTCTATGGTCCGAAGATCTAGCATGGACCGAATGTCCTCAAGCATGACCTCCAGCATGACCGGAATGGGTCTTGGTGGAATCACCGGCATAACAACAGGAATGAGTACGATGAGCTGCACCAGGGAACAACCGATGACAATTGGTGGAATGCCATCTAATTACGTTCCTGGCTTGTCGGCATACTACAACATTTCGAGCTTTTGCCAGCGTCCGGGCCAAACACGTCGCTGGCCGATGCAACGAGCCGGCCCTACAGCCCAACATCGTCCCGGTCGCTCACACAGCACTGGCGCGCTGCATCGCATGAAACATTCCATGAGAAACAGCCCTAACACTCAATACACTCATAATTTGATCTGCAAGATGGCTGATCAGAATGAACGTCGTCGTCGACAGGATACGTTAGAAATGATACCACAGAGCTACTACTCACAGCAACCTCTTAAAGTGGAGTTAACTGAGTTCTACTCTCGGGATAACTCCAAAGATCACCACACAGAACAATATGATCTGGTCAACGACAACATTCTTCCAAATCCTGTTCTTCGCCGAGGCCAAAACTTCTTCTTTGCTGTTCGCTTTGATAGGACATATGATAAACAACAGGATATGATTCGCCTCGTGTTCTGTTTTGGTCCAAAGCCCAGTGTCACAAAAGGTACTCGAGTTGTTTTGCCCGTAAACTGGAGCACACAACAGGGCGTTTTCCAACATTCACGGGAGATGATGGGTATGGGCATGGGTTTGGGTATGTCTCGTATGCAAGATACAAGCACTGGAATGGCAACAATGGGCACGATTGGTACCATGGGTACAATGAGTTCCATGGGACCTATGAGTGGCATGAGAGAAACGACCACTTACGGAGTACGTCGCAGCTCATTTAGCAACGAGCCCCTACCACTCCAACATAGTCCACTTAGTCCTCATGGACCCATGGATAGACCAATGATAGAGCGCTATGGAGGAACTACTCAGCACTCTTCATTTGGACGTGGATACGGATCACGTCACGGATCACGTCACGGGTCAATGCAAAACTTAGCTGCACTCGCTCACGACATGGACCGATGGGACATTAGTATCCAGCGTCAAGATGGTAATACGATTACCTTCCAAGTTCACGTTCCCGCTACTGCTCCCGTCGGTGTGTGGAACTGCTGGGTGCAGACCAATCGTTTTGGTCAGCGTGACAACCGACACGATTACAAATGTGACGAAGATGTTTATATTTTGTTCAACCCGTGGTGCCGCGAAGATCCCGTTTACATGGATAATGAATCATCACGAAAGGAGTACGTACTTAATGAGCAAGGCAAAATTTGGTGTGGTACCTGGCGTCAACCCAAGGGTCGCAAATGGATATATGGACAGTTTGATGATGTGGTATTGCCTGCCTGTATGTACTTATTGGAGCGCAGCGGCTTGGAACATTCTGAACGTGGTAACCCTGTCCGTGTTTGCAGAGCTATTTCGTCAATGATCAATGCCAACCATGATGACGATGGTCTAATGGTGGGTCGCTACGATAGTGAATATAAGGATGGTGTTGCACCTCACGCTTGGACAGGTTCAGTGGCGATTTTGGAACGCTACCTGTCCGACGGCGGCCGGCCTGTTGAGTACGGCCAATGCTGGGTGTTCTCCGGTTTGGTTGTGACTATTTGCAGGGCTCTTGGTATTCCTTGCCGTTCAGTAACGAATTATGTATCAGCTCATGATACCAACAGGACCTTCACGGTGGACAAATACTTTGACCGCGACGGAAATGAGGTACCGAATGGTCCGGACGAAGATTGTTATGATTCTTGCTGGAATTTCCATGTTTGGAATGATGTTTGGATGCAAAGACCGGACTTACCACAAGGGTACAGTGGCTGGCAGATCATTGATTCGACACCTCAGGAGGAGTCTGAATCTGTTTATCACTGTGGGCCGGCTAGTGTGGAAGCTGTTCGCCGAGGTGAAGTTGGCTTCCAATATGACACGCCATTTATGTACTGCCAAATAAATGCTGAGCTTTGCCACTTCCAAGAGGAAGAGAACTCGGAATGGGGATTCATTAGAATGGCCTCTAATCAATACCAAGTCGGACGCAAGATTCTTACGAAAAATCCAAGCCGCGATGATGACGAGGGAGAGAGTGACATGCTGGAGATTACTCACGAATATAAGACTGTAGACAGCTCGTCACCCGAGCGTTTCGCTATCATTGCCTCTTGCCGCGGATACCAACGCTTGCAACAGTACTATGAGTACCCAGACCGCAACTTTGAGGATGTGTATTTCGACCTCATGGATATTGACATAGTGCCTTACGGACAACCATTTGATTGCACCATGAACATTCAGAACAAATCTCACGAAGACCGTACCATCTGGTGTGTTCTAACAGCATCTTCATGCTACTACACTGGCGCGATCGCTTCGCGTCTGCGAAGGGCGCAGGGTGAGTTCATCGTCCGAGCTGGACAGCGAGAGGTATTGAAGCTTCATGTGACTCCTCAAGAATACATGGATAAACTAGTAGATCACTCCATGGTGAAGGTGCATGCCATGGCTTATGTAAAACAAACTCGCCAGGCTTGGTCTGATGAAGATGACTTCCCGCTGCACAAGCCACGCATGCAAGTGCAGGTGAGAAGCCAGCCTTGCGTAGGTCAAGAATGCGCCATCACCTTCAGTTTCCAGAACCCATTGAATGTCCAACTGACGGACTGTTACTTCACATTCGAAGGACCTGGTGTTCAAAGGCCAAGACAGATACGATTCCGTGACGTGAAGCCTGGTGAGTTCGTGAATTACCAAGACAAGTTTGTGCCGCGGCGCCAGGGAGAGCGTCGCATCGTGGTGACGTTCTCGTCGCGGCAGATGGACGAGATCTTCGGATGCACGTCGGTGACCGTGCGCGGCTAG

Protein

MSMVRRSSMDRMSSSMTSSMTGMGLGGITGITTGMSTMSCTREQPMTIGGMPSNYVPGLSAYYNISSFCQRPGQTRRWPMQRAGPTAQHRPGRSHSTGALHRMKHSMRNSPNTQYTHNLICKMADQNERRRRQDTLEMIPQSYYSQQPLKVELTEFYSRDNSKDHHTEQYDLVNDNILPNPVLRRGQNFFFAVRFDRTYDKQQDMIRLVFCFGPKPSVTKGTRVVLPVNWSTQQGVFQHSREMMGMGMGLGMSRMQDTSTGMATMGTIGTMGTMSSMGPMSGMRETTTYGVRRSSFSNEPLPLQHSPLSPHGPMDRPMIERYGGTTQHSSFGRGYGSRHGSRHGSMQNLAALAHDMDRWDISIQRQDGNTITFQVHVPATAPVGVWNCWVQTNRFGQRDNRHDYKCDEDVYILFNPWCREDPVYMDNESSRKEYVLNEQGKIWCGTWRQPKGRKWIYGQFDDVVLPACMYLLERSGLEHSERGNPVRVCRAISSMINANHDDDGLMVGRYDSEYKDGVAPHAWTGSVAILERYLSDGGRPVEYGQCWVFSGLVVTICRALGIPCRSVTNYVSAHDTNRTFTVDKYFDRDGNEVPNGPDEDCYDSCWNFHVWNDVWMQRPDLPQGYSGWQIIDSTPQEESESVYHCGPASVEAVRRGEVGFQYDTPFMYCQINAELCHFQEEENSEWGFIRMASNQYQVGRKILTKNPSRDDDEGESDMLEITHEYKTVDSSSPERFAIIASCRGYQRLQQYYEYPDRNFEDVYFDLMDIDIVPYGQPFDCTMNIQNKSHEDRTIWCVLTASSCYYTGAIASRLRRAQGEFIVRAGQREVLKLHVTPQEYMDKLVDHSMVKVHAMAYVKQTRQAWSDEDDFPLHKPRMQVQVRSQPCVGQECAITFSFQNPLNVQLTDCYFTFEGPGVQRPRQIRFRDVKPGEFVNYQDKFVPRRQGERRIVVTFSSRQMDEIFGCTSVTVRG

Uniprot

H9J0Y3 A0A2H1V212 A0A2A4JLB1 A0A2W1BUE8 A0A194PMS4 A0A194QLK1 + More
A0A0L7KJC7 A0A212ESV0

Pubmed

19121390 28756777 26354079 26227816 22118469

EMBL

BABH01010459 ODYU01000329 SOQ34883.1 NWSH01001190 PCG72202.1 KZ149933 + More
PZC77264.1 KQ459598 KPI94731.1 KQ461196 KPJ06438.1 JTDY01009466 KOB63458.1 AGBW02012723 OWR44549.1

Proteomes

UP000005204 UP000218220 UP000053268 UP000053240 UP000037510 UP000007151 + More

PRIDE

H9J0Y3

Pfam

PF00927   Transglut_C        + More
PF01841   Transglut_core
PF00868   Transglut_N

Interpro

IPR001102   Transglutaminase_N        + More
IPR036985   Transglutaminase-like_sf
IPR002931   Transglutaminase-like
IPR036238   Transglutaminase_C_sf
IPR008958   Transglutaminase_C
IPR038765   Papain-like_cys_pep_sf
IPR013783   Ig-like_fold
IPR014756   Ig_E-set

SUPFAM

SSF54001   SSF54001        + More
SSF49309   SSF49309
SSF81296   SSF81296

Gene 3D

2.60.40.10 3.90.260.10

ProteinModelPortal

H9J0Y3 A0A2H1V212 A0A2A4JLB1 A0A2W1BUE8 A0A194PMS4 A0A194QLK1 + More
A0A0L7KJC7 A0A212ESV0

PDB

1EX0 E-value=2.11898e-108, Score=1007

KEGG

101738139 K05619 transglutaminase 1 [EC:2.3.2.13] | (RefSeq) hemocyte protein-glutamine gamma-glutamyltransfer

GO

GO:0018149 GO:0003810 GO:0006355 GO:0009072 GO:0003824 GO:0006520 GO:0008483 GO:0006418 GO:0016507 GO:0048384

Length:

972

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

14.16775

Exp number, first 60 AAs:

13.8821

Total prob of N-in:

0.65700

POSSIBLE N-term signal

sequence

outside

1 - 972

Pi

243.847412

Theta

203.639174

Tajima's D

0.622776

CLR

0.593295

CSRT

0.545022748862557

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics