Gene

KWMTBOMO02102

Pre Gene Modal

BGIBMGA002989

Annotation

PREDICTED:_NADH-ubiquinone_oxidoreductase_49_kDa_subunit-like_[Amyelois_transitella]

Location

Bomo_Chr4(+):12041208-12042709      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.954

CDS

ATGCTTAATCTTCGTTTCTTGACAACGTGTAACAGTATCTTTAATTTTTCTAGAAGAAACATAACGTTTTACGCACCGCTGTCTGCGCACAGGTGGTATCCGGATCCTGAGTTTGTTAAGCAATTCAACGGTCCCGTCATGTATCCCACACCAGAGACCAACAAATTTTATAAAATGATCTACAATTCTAAACTAAGGCCTCTGGAACGGAAACTACAGAATATGTGGATAAATTTCGGTCCCCAACACCCCGCGGCGCACGGCGTACTCCGTCTCATACTGGAGCTCGACGGGGAAATGGTTGTACGGGCCGATCCCCATATCGGTTTTCTTCATAGAGCCACAGAAAAATTAATGGAATCCAAACATTACAACCAAAACCTGCCCTACATGGATCGATTGGATTACGTATCCACGATCTCCAACGAAACATGCTTCGCTCTAGCTGTCGAAACGCTCCTGAACATTGAAGCCCCCCCACGTGCCAAAGCTATTCGTGTTCTTTGCGGTGAATTATGCCGCATAGCTAATCACATGCTTAACGTATCAGGCACGGTATTGGATGCTGGAGGTATAACTCCTTTTTTTTGGATGTGCGAAGAAAGAGAAAAGATTTACGAATTGTTTGAAAGGCTTTGTGGCGCGCGTGTTCATTGCGCGTATGTTCGACCTGGGGGTGTGTCCCAAGATTTACCTATTGGGTTTCTGGATGATGTCTATGAACTATGTATGAAATTGGGTGAAAGATTTGACGAAACTGAAGACGTGGCAACGGGGAATCGATTATACTATGCTAGAACAGCTGGGATTGGTGTACTTACCGCCCACGAAGCCATGAGTCTCGGATGCACAGGTCCGATGTTGCGATGTACTGGAGTTAAATGGGACTTGAGGGTAGCGCATCCTTATGATGATTACGACATGTACGACTTCGATGTACCCGTGGGAACATTTGGAGACAGTTATGATCGTCACCTTTTAAGATTGGAAGAAATGCGACAATCGCTACGCATCATCAACCAAGTATTAGATACAATACCGCCAGGGGAAATTAAAACCGACGATTCGAAAATATGTCTTCCTTCAAGAGTCGAGATGAAAACATCCATGGAATCATTAATCCACCACTTTAAGCTATGCACTGAAGGATACCCGGTTCCGCCAGGAGCCACATATACTGCTATAGAATGTCCAAAAGGCGAGCTAGGACTGTACATGGTGGCCGATGGTACATCCAAACCCTATCGGATTTTTATTCGCCCTAGTTCTTATACCCATTTGATGAGCCTCTCTTTATTAGGTAAAGGTTTAATGCTTGCCGATATTGCTGTTCTCATTGCTACCGTCGATGTTGTGTTCGGTGACATAGATCGCTAG

Protein

MLNLRFLTTCNSIFNFSRRNITFYAPLSAHRWYPDPEFVKQFNGPVMYPTPETNKFYKMIYNSKLRPLERKLQNMWINFGPQHPAAHGVLRLILELDGEMVVRADPHIGFLHRATEKLMESKHYNQNLPYMDRLDYVSTISNETCFALAVETLLNIEAPPRAKAIRVLCGELCRIANHMLNVSGTVLDAGGITPFFWMCEEREKIYELFERLCGARVHCAYVRPGGVSQDLPIGFLDDVYELCMKLGERFDETEDVATGNRLYYARTAGIGVLTAHEAMSLGCTGPMLRCTGVKWDLRVAHPYDDYDMYDFDVPVGTFGDSYDRHLLRLEEMRQSLRIINQVLDTIPPGEIKTDDSKICLPSRVEMKTSMESLIHHFKLCTEGYPVPPGATYTAIECPKGELGLYMVADGTSKPYRIFIRPSSYTHLMSLSLLGKGLMLADIAVLIATVDVVFGDIDR

Similarity

Belongs to the complex I 49 kDa subunit family.

Uniprot

H9J0F2   A0A0L7LV19   A0A194QSD2   A0A2A4IW69   A0A2W1BZL8   A0A212F9S9   + More
A0A194PZD8   A0A2H1WHW1   B4JZW3   A0A182JHJ2   A0A034WIL4   A0A182LZ26   B0WWS9   A0A0K8U9R6   D2A579   W8BPS0   A0A1Q3FM55   A0A1Z5KVS6   A0A182MPT1   A0A2R5LKW5   B4PW13   A0A182QSH7   Q16Q68   A0A182TTJ2   A0A182I9M2   A0A182N0Z0   A0A182KFB3   A0A182X5B3   T1E9X3   A0A182PIN9   B4MF01   B4L7B6   A0A182L3U2   A0A182I6L0   A0A1B0CDK6   A0A084WPL7   Q7PTG6   A0A0K8RK74   A0A182IKS4   A0A2M4A5Q1   Q9V4E0   A0A182HFH3   A0A182V7Y6   A0A182UZE7   A0A2M4A5R4   W5JI89   B5DTD6   B4NHW8   B3P9S8   B4H874   A0A182XY39   Q1HQ80   A0A182PM65   A0A1J1HIR6   B3N044   A0A1W4V5B6   A0A0J9S0T2   A0A2M3Z2Q1   A0A2M3Z2M7   A0A182FIL8   D3TR12   A0A0M4ETC2   A0A1L8EJC6   A0A182UDY9   A0A1A9ZL17   A0A3B0KUM6   A0A2M4BM20   A0A182WWD1   A0A182WBD4   B4IIX1   A0A0K8TTI9   A0A1L8E0G2   A0A1A9XFD2   A0A1B0BFM9   S4NXW7   A0A1L8E0L2   B7PI71   U5EVJ5   A0A194PSU9   A0A212FJU2   T1PH29   A0A1A9V8L5   A0A1A9WEW4   A0A2W1BJF4   A0A182K1D4   A0A182RJ19   A0A087TAA0   A0A1I8P7E3   A0A182VVB4   W8S0Q1   F5HJY7   J3JUS9   A0A2P6KKX2   A0A1B0GJD4   A0A1D2NDE4   A0A182Y825   A0A2A4IYD3   J9JN92   A0A0L8HYA8   A0A1W4X418  

Pubmed

19121390    26227816    26354079    28756777    22118469    17994087    + More
25348373    18362917    19820115    24495485    28528879    17550304    17510324    18057021    20479145    20966253    24438588    12364791    14747013    17210077    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    26483478    20920257    23761445    15632085    25244985    22936249    20353571    26369729    23622113    25315136    22516182    27289101   

EMBL

BABH01010479    JTDY01000025    KOB79348.1    KQ461196    KPJ06451.1    NWSH01006437    + More
PCG63432.1    KZ149933    PZC77273.1    AGBW02009564    OWR50496.1    KQ459583    KPI98686.1    ODYU01008767    SOQ52648.1    CH916380    EDV90979.1    GAKP01004790    JAC54162.1    AXCM01009391    DS232152    EDS36190.1    GDHF01029219    JAI23095.1    KQ971345    EFA05697.1    GAMC01005613    JAC00943.1    GFDL01006441    JAV28604.1    GFJQ02007800    JAV99169.1    AXCM01009889    GGLE01006048    MBY10174.1    CM000161    EDW99318.1    AXCN02001373    CH477759    EAT36538.1    APCN01001005    GAMD01001523    JAB00068.1    CM000831    CH940665    ACY70475.1    EDW71102.1    CH933813    EDW10910.2    APCN01003658    AJWK01007963    ATLV01025101    KE525369    KFB52161.1    AAAB01008807    EAA03959.4    GADI01002864    JAA70944.1    GGFK01002806    MBW36127.1    AE014135    BT032847    AAF59336.2    ACD81861.1    AGB96554.1    JXUM01036889    KQ561109    KXJ79679.1    GGFK01002798    MBW36119.1    ADMH02001172    ETN63841.1    CH475843    EDY71141.2    CH964272    EDW83618.1    CH954184    EDV45241.1    CH479221    EDW34874.1    DQ443172    ABF51261.1    CVRI01000004    CRK87450.1    CH902639    EDV33552.1    CM002916    KMZ07247.1    GGFM01002048    MBW22799.1    GGFM01002004    MBW22755.1    CCAG010006472    EZ423864    ADD20140.1    CP012527    ALC48135.1    GFDG01000045    JAV18754.1    OUUW01000017    SPP89021.1    GGFJ01004850    MBW53991.1    CH480845    EDW50912.1    GDAI01000132    JAI17471.1    GFDF01001866    JAV12218.1    JXJN01013592    GAIX01011992    JAA80568.1    GFDF01001865    JAV12219.1    ABJB010177100    ABJB010488804    DS717196    EEC06293.1    GANO01001832    JAB58039.1    KQ459593    KPI96387.1    AGBW02008219    OWR53996.1    KA647440    AFP62069.1    KZ150147    PZC72870.1    KK114264    KFM62039.1    KF994920    AHL83459.1    AAAB01008847    EAA06952.3    EGK96602.1    EGK96603.1    BT126994    AEE61956.1    MWRG01009653    PRD26967.1    AJWK01020177    LJIJ01000079    ODN03287.1    NWSH01004637    PCG64835.1    ABLF02023377    KQ417023    KOF94166.1   

Proteomes

UP000005204    UP000037510    UP000053240    UP000218220    UP000007151    UP000053268    + More
UP000001070    UP000075880    UP000075883    UP000002320    UP000007266    UP000002282    UP000075886    UP000008820    UP000075902    UP000075840    UP000075884    UP000075881    UP000076407    UP000075885    UP000008792    UP000009192    UP000075882    UP000092461    UP000030765    UP000007062    UP000000803    UP000069940    UP000249989    UP000075903    UP000000673    UP000001819    UP000007798    UP000008711    UP000008744    UP000076408    UP000183832    UP000007801    UP000192221    UP000069272    UP000092444    UP000092553    UP000092445    UP000268350    UP000075920    UP000001292    UP000092443    UP000092460    UP000001555    UP000095301    UP000078200    UP000091820    UP000075900    UP000054359    UP000095300    UP000094527    UP000007819    UP000053454    UP000192223   

PRIDE

H9J0F2    Q9V4E0    Q1HQ80   

Pfam

PF00346   Complex1_49kDa        + More
PF15031   DUF4528

Interpro

IPR038290   NADH_Q_OxRdtase_suD_sf        + More
IPR029014   NiFe-Hase_large       
IPR014029   NADH_UbQ_OxRdtase_49kDa_CS       
IPR022885   NDH1_su_D/H       
IPR001135   NADH_Q_OxRdtase_suD       
IPR029245   DUF4528       

SUPFAM

SSF56762   SSF56762       

Gene 3D

1.10.645.20    

ProteinModelPortal

H9J0F2   A0A0L7LV19   A0A194QSD2   A0A2A4IW69   A0A2W1BZL8   A0A212F9S9   + More
A0A194PZD8   A0A2H1WHW1   B4JZW3   A0A182JHJ2   A0A034WIL4   A0A182LZ26   B0WWS9   A0A0K8U9R6   D2A579   W8BPS0   A0A1Q3FM55   A0A1Z5KVS6   A0A182MPT1   A0A2R5LKW5   B4PW13   A0A182QSH7   Q16Q68   A0A182TTJ2   A0A182I9M2   A0A182N0Z0   A0A182KFB3   A0A182X5B3   T1E9X3   A0A182PIN9   B4MF01   B4L7B6   A0A182L3U2   A0A182I6L0   A0A1B0CDK6   A0A084WPL7   Q7PTG6   A0A0K8RK74   A0A182IKS4   A0A2M4A5Q1   Q9V4E0   A0A182HFH3   A0A182V7Y6   A0A182UZE7   A0A2M4A5R4   W5JI89   B5DTD6   B4NHW8   B3P9S8   B4H874   A0A182XY39   Q1HQ80   A0A182PM65   A0A1J1HIR6   B3N044   A0A1W4V5B6   A0A0J9S0T2   A0A2M3Z2Q1   A0A2M3Z2M7   A0A182FIL8   D3TR12   A0A0M4ETC2   A0A1L8EJC6   A0A182UDY9   A0A1A9ZL17   A0A3B0KUM6   A0A2M4BM20   A0A182WWD1   A0A182WBD4   B4IIX1   A0A0K8TTI9   A0A1L8E0G2   A0A1A9XFD2   A0A1B0BFM9   S4NXW7   A0A1L8E0L2   B7PI71   U5EVJ5   A0A194PSU9   A0A212FJU2   T1PH29   A0A1A9V8L5   A0A1A9WEW4   A0A2W1BJF4   A0A182K1D4   A0A182RJ19   A0A087TAA0   A0A1I8P7E3   A0A182VVB4   W8S0Q1   F5HJY7   J3JUS9   A0A2P6KKX2   A0A1B0GJD4   A0A1D2NDE4   A0A182Y825   A0A2A4IYD3   J9JN92   A0A0L8HYA8   A0A1W4X418  

PDB

6G72     E-value=2.10959e-152,     Score=1383

KEGG

101739282    K03935 NADH dehydrogenase (ubiquinone) Fe-S protein 2 [EC:7.1.1.2 1.6.99.3] | (RefSeq) NADH-ubiquino

PATHWAY

00190    Oxidative phosphorylation - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0016651   GO:0048038   GO:0051287   GO:0006120   GO:0003954   GO:0005739   GO:0005747   GO:0009072   GO:0003824   GO:0006520   GO:0008483   GO:0006418   GO:0016507   GO:0048384   GO:0055114  

Length:

458

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

6.57167

Exp number, first 60 AAs:

0.00171

Total prob of N-in:

0.01615

outside

1  -  458

 

 

Pi

21.645592

Theta

6.23369

Tajima's D

1.660476

CLR

0.373097

CSRT

0.84120793960302

Interpretation

Uncertain