Gene

KWMTBOMO02101

Pre Gene Modal

BGIBMGA002988

Annotation

PREDICTED:_large_neutral_amino_acids_transporter_small_subunit_2_[Plutella_xylostella]

Location

Bomo_Chr4(+):12016478-12038371      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.966

CDS

ATGGGAACGATTATTGGATCCGGAATATTCATATCCCCTGCTGGAGTTTACTTGTACACAGGGTCAGTGGCTGCCTCGTTAATAATATGGCTTGCGAGCGGACTTCTGTCCACGCTGGGAGCTTTGTGCTACGCCGAGCTGGGTACATCGATCACAAGATCAGGAGGAGACTATGCGTACATATATACAGCCTTCGGACCGCTGCCGGCGTTTTTGAGGCTCTGGATTGCACTGCTCATTATCAGGCCTACCACCCAGGCGATAGTGGCGCTCACCTTTGGAAATTACGTTGTCAAACCCTTCTTTCCGGAGTGTGATCCACCGGAGAACGCTGTCAGACTCCTTGCTGCAGTATGCTTGTGTGTACTGACTGCGATAAACTGTATCAGCGTGAGATGGACCATGCGCATCCAAGATGTGTTTACAACGTCAAAGCTACTGGCTCTAGTCGTCATCATTATTTCGGGACTCTACTATATTTGCATAGGTAACACACAAAATTTCGAGAACGCATTTGCTGGAGAATATAGTGCTGGTAATATTGCGCTAGCCTTTTATTCGGGCCTCTTCGCTTTTGGAGGTTGGAATTATCTCAACTTTGTAACCGAAGAACTCCAGGATCCTTATAAGAATCTTCCTCGCGCGATATGGATCGCTTTGCCTCTGGTTACGATTATCTACGTCATGGCAAACTTGGCCTACTTTGCGGTCGTCACTAAAATGGAAATGATGGCAAATCCAGCCGTTGCTGCGATATTCGGTGATCGCCTCTTCGGAAACTGGAGCTGGGTGATTCCAGTGTTCGTGGCGTTGTCCACTTTTGGAGGCGTCAACGGTGTCTTATTCACGTCAGCTCGTCTATTCGCCACCGGCGCCCAGGAGGGACACATGCCGGCGTTCTTTTCACTGTTCCACGTCGATAAACAAACTCCTATACCCTCTCTTATATTTACGTGTTTCTTCTCGTTACTCATGTTGACAACTAGCAACGTTTTCGCCCTTATAAACTACTACTCGCAGATACTTTGGCTTTCCGTCGGCGCATCTGTCGTTGGAATGTTGTGGCTTCGACGAACGAAACCTGACCTGCCTCGGCCAATCAAAGTCAACATAGTTATACCGTACATATTTCTCATCGCTATTGCGTGTTTAGTTATAATTCCGGCGATTGTACAGCCCAAGGATACTGCAATAGGTATTGTTATTTTACTCTCTGGCATCCCTGTTTACTATTTGTGTGTAAAATGGCAAAGGAAACCAGAAGCGTATCATTCGTTCTCCGGTGGCATTTTGAGGTTCCTACAAAAAACATGTTCCTGTATTTATCTTGATTCCACAGAGAAATTGTCTGAGAGTTAG

Protein

MGTIIGSGIFISPAGVYLYTGSVAASLIIWLASGLLSTLGALCYAELGTSITRSGGDYAYIYTAFGPLPAFLRLWIALLIIRPTTQAIVALTFGNYVVKPFFPECDPPENAVRLLAAVCLCVLTAINCISVRWTMRIQDVFTTSKLLALVVIIISGLYYICIGNTQNFENAFAGEYSAGNIALAFYSGLFAFGGWNYLNFVTEELQDPYKNLPRAIWIALPLVTIIYVMANLAYFAVVTKMEMMANPAVAAIFGDRLFGNWSWVIPVFVALSTFGGVNGVLFTSARLFATGAQEGHMPAFFSLFHVDKQTPIPSLIFTCFFSLLMLTTSNVFALINYYSQILWLSVGASVVGMLWLRRTKPDLPRPIKVNIVIPYIFLIAIACLVIIPAIVQPKDTAIGIVILLSGIPVYYLCVKWQRKPEAYHSFSGGILRFLQKTCSCIYLDSTEKLSES

Uniprot

A0A2W1BUF8   A0A194QLP9   A0A212ESU3   A0A0M3QTS8   B4N798   A0A0L0C8U3   + More
A0A1B6KXX4   A0A0K8U6B8   A0A034W7R9   B4LUH5   B4KHZ0   D6WNJ1   A0A1B6D0D7   B4P1X7   B4JBK6   B3N3Y1   B4GQJ3   Q29NJ9   A0A3B0K607   A0A1W4UYQ0   Q9VKC2   W8AMB0   A0A0A1X787   B4IE55   A0A1B0BI19   A0A1A9XUE9   A0A1B6ILP1   A0A1B6FVA4   B3MVI6   A0A1A9WZS2   A0A1I8PVX4   A0A182LZK6   A0A1Y9GLJ8   B4Q3P2   A0A1A9UGV2   A0A2M4AAC5   A0A2M4AAP9   A0A1A9ZR29   A0A182QSE9   A0A1I8N6J1   U5ETJ4   A0A1B0G797   A0A2M3YYU9   A0A2M3YYT6   Q17E71   A0A182JIN8   A0A084W7T9   S4P8K7   A0A1Q3FLB6   A0A1J1J311   A0A1Q3FL71   B0W124   U4TZP9   A0A067QPT5   A0A1Y1N544   R4FMC0   A0A224XFU9   A0A146LGY9   A0A0A9Y5T6   N6U6I6   E0VVE6   A0A023ERZ6   R4WDM1   A0A2P8YUZ1   T1J266   A0A131YP25   A0A224Z1S0   R7V9S2   A0A293LYV5   A0A1B0CTD0   A0A087U4Z8   A0A0L8H4R7   A0A2R5LNY6   A0A1Z5L7Y8   A0A2M4AAW9   Q7QKR6   V4A3A4   A0A154PMR5   A0A2M4ABG0   E2BKM3   A0A182VPP9   A0A182T518   A0A0B6ZJE7   A0A182REC1   A0A2M4ABR2   B5DYS6   A0A232ERK8   A0A1L8DEG0   B4GYT3   K7IXD9   A0A210PSU8   A0A182NMK2   A0A182FP70   A0A1W7RA21   T1EFM3   A0A2L2YCD9   A0A0R3NFJ2   A0A182K8S7   A0A182PQA6   K1Q3X1  

Pubmed

28756777    26354079    22118469    17994087    26108605    25348373    + More
18057021    18362917    19820115    17550304    15632085    23185243    10731132    12537568    12537572    12537573    12537574    12530223    16110336    17569856    17569867    26109357    26109356    24495485    25830018    22936249    25315136    17510324    24438588    23622113    23537049    24845553    28004739    26823975    25401762    20566863    24945155    23691247    29403074    26830274    28797301    23254933    28528879    9087549    12364791    14747013    17210077    20798317    28648823    20075255    28812685    26561354    22992520   

EMBL

KZ149933    PZC77274.1    KQ461196    KPJ06452.1    AGBW02012723    OWR44558.1    + More
CP012523    ALC39409.1    CH964182    EDW80239.1    JRES01000841    KNC27814.1    GEBQ01023664    JAT16313.1    GDHF01031919    GDHF01030159    GDHF01030120    GDHF01024280    GDHF01020508    JAI20395.1    JAI22155.1    JAI22194.1    JAI28034.1    JAI31806.1    GAKP01008595    GAKP01008594    GAKP01008593    JAC50357.1    CH940649    EDW64161.1    CH933807    EDW11272.1    KRG02625.1    KQ971343    EFA03221.1    GEDC01018109    JAS19189.1    CM000157    EDW88148.1    KRJ97606.1    CH916368    EDW04029.1    CH954177    EDV58833.1    CH479187    EDW39865.1    CH379059    EAL34220.1    KRT03755.1    OUUW01000006    SPP81439.1    AE014134    AF273478    AY051907    AAF53154.1    AAK58692.1    AAK93331.1    AAN10800.2    AFH03670.1    AHN54377.1    AHN54378.1    GAMC01020979    GAMC01020976    GAMC01020973    GAMC01020970    GAMC01020967    JAB85588.1    GBXI01007754    JAD06538.1    CH480831    EDW45882.1    JXJN01014746    GECU01019872    JAS87834.1    GECZ01015680    JAS54089.1    CH902624    EDV33251.1    KPU74366.1    KPU74367.1    AXCM01000109    APCN01005972    CM000361    CM002910    EDX04767.1    KMY89865.1    GGFK01004371    MBW37692.1    GGFK01004524    MBW37845.1    AXCN02001594    GANO01002754    JAB57117.1    CCAG010022298    GGFM01000699    MBW21450.1    GGFM01000678    MBW21429.1    CH477285    EAT44748.1    ATLV01021297    KE525316    KFB46283.1    GAIX01005886    JAA86674.1    GFDL01006666    JAV28379.1    CVRI01000067    CRL06751.1    GFDL01006685    JAV28360.1    DS231819    EDS42841.1    KB631904    ERL87094.1    KK853096    KDR11465.1    GEZM01013433    JAV92558.1    ACPB03012598    ACPB03012599    GAHY01001769    JAA75741.1    GFTR01006512    JAW09914.1    GDHC01011205    JAQ07424.1    GBHO01040858    GBHO01015177    GBHO01000716    GBHO01000113    GBHO01000108    JAG02746.1    JAG28427.1    JAG42888.1    JAG43491.1    JAG43496.1    APGK01040748    APGK01040749    APGK01040750    KB740984    ENN76266.1    DS235811    EEB17352.1    GAPW01001601    JAC11997.1    AK417813    BAN21028.1    PYGN01000345    PSN48047.1    JH431796    GEDV01008239    JAP80318.1    GFPF01011969    MAA23115.1    AMQN01018059    KB293833    ELU15339.1    GFWV01008410    MAA33139.1    AJWK01027431    KK118198    KFM72437.1    KQ419199    KOF84286.1    GGLE01007127    MBY11253.1    GFJQ02003590    JAW03380.1    GGFK01004612    MBW37933.1    AAAB01008555    EAA03429.3    KB202823    ESO87801.1    KQ434991    KZC13175.1    GGFK01004627    MBW37948.1    GL448819    EFN83721.1    HACG01021783    CEK68648.1    GGFK01004869    MBW38190.1    CM000070    EDY67636.2    NNAY01002581    OXU20999.1    GFDF01009235    JAV04849.1    CH479198    EDW27951.1    AAZX01000012    NEDP02005521    OWF39558.1    GFAH01000390    JAV47999.1    AMQM01005099    KB096785    ESO01412.1    IAAA01013998    IAAA01013999    LAA05030.1    KRS99769.1    KRS99770.1    JH818799    EKC28548.1   

Proteomes

UP000053240    UP000007151    UP000092553    UP000007798    UP000037069    UP000008792    + More
UP000009192    UP000007266    UP000002282    UP000001070    UP000008711    UP000008744    UP000001819    UP000268350    UP000192221    UP000000803    UP000001292    UP000092460    UP000092443    UP000007801    UP000091820    UP000095300    UP000075883    UP000075840    UP000000304    UP000078200    UP000092445    UP000075886    UP000095301    UP000092444    UP000008820    UP000075880    UP000030765    UP000183832    UP000002320    UP000030742    UP000027135    UP000015103    UP000019118    UP000009046    UP000245037    UP000014760    UP000092461    UP000054359    UP000053454    UP000007062    UP000030746    UP000076502    UP000008237    UP000075920    UP000075901    UP000075900    UP000215335    UP000002358    UP000242188    UP000075884    UP000069272    UP000015101    UP000075881    UP000075885    UP000005408   

PRIDE

Q9VKC2   

Pfam

PF13520   AA_permease_2

Interpro

IPR002293   AA/rel_permease1       

ProteinModelPortal

A0A2W1BUF8   A0A194QLP9   A0A212ESU3   A0A0M3QTS8   B4N798   A0A0L0C8U3   + More
A0A1B6KXX4   A0A0K8U6B8   A0A034W7R9   B4LUH5   B4KHZ0   D6WNJ1   A0A1B6D0D7   B4P1X7   B4JBK6   B3N3Y1   B4GQJ3   Q29NJ9   A0A3B0K607   A0A1W4UYQ0   Q9VKC2   W8AMB0   A0A0A1X787   B4IE55   A0A1B0BI19   A0A1A9XUE9   A0A1B6ILP1   A0A1B6FVA4   B3MVI6   A0A1A9WZS2   A0A1I8PVX4   A0A182LZK6   A0A1Y9GLJ8   B4Q3P2   A0A1A9UGV2   A0A2M4AAC5   A0A2M4AAP9   A0A1A9ZR29   A0A182QSE9   A0A1I8N6J1   U5ETJ4   A0A1B0G797   A0A2M3YYU9   A0A2M3YYT6   Q17E71   A0A182JIN8   A0A084W7T9   S4P8K7   A0A1Q3FLB6   A0A1J1J311   A0A1Q3FL71   B0W124   U4TZP9   A0A067QPT5   A0A1Y1N544   R4FMC0   A0A224XFU9   A0A146LGY9   A0A0A9Y5T6   N6U6I6   E0VVE6   A0A023ERZ6   R4WDM1   A0A2P8YUZ1   T1J266   A0A131YP25   A0A224Z1S0   R7V9S2   A0A293LYV5   A0A1B0CTD0   A0A087U4Z8   A0A0L8H4R7   A0A2R5LNY6   A0A1Z5L7Y8   A0A2M4AAW9   Q7QKR6   V4A3A4   A0A154PMR5   A0A2M4ABG0   E2BKM3   A0A182VPP9   A0A182T518   A0A0B6ZJE7   A0A182REC1   A0A2M4ABR2   B5DYS6   A0A232ERK8   A0A1L8DEG0   B4GYT3   K7IXD9   A0A210PSU8   A0A182NMK2   A0A182FP70   A0A1W7RA21   T1EFM3   A0A2L2YCD9   A0A0R3NFJ2   A0A182K8S7   A0A182PQA6   K1Q3X1  

PDB

6IRT     E-value=9.03182e-112,     Score=1032

KEGG

101739424    no KO assigned | (RefSeq) large neutral amino acids transporter small subunit 2

GO

GO:0022857   GO:0016021   GO:0050832   GO:1903801   GO:0015179   GO:0015171   GO:0016020   GO:0046873   GO:0009072   GO:0003824   GO:0006520   GO:0008483   GO:0006418   GO:0016507   GO:0048384   GO:0055085  

Length:

452

Number of predicted TMHs:

11

Exp number of AAs in TMHs:

244.29844

Exp number, first 60 AAs:

30.76898

Total prob of N-in:

0.33568

POSSIBLE N-term signal

sequence

outside

1  -  14

TMhelix

15  -  37

inside

38  -  57

TMhelix

58  -  80

outside

81  -  110

TMhelix

111  -  133

inside

134  -  145

TMhelix

146  -  168

outside

169  -  177

TMhelix

178  -  200

inside

201  -  215

TMhelix

216  -  238

outside

239  -  259

TMhelix

260  -  282

inside

283  -  312

TMhelix

313  -  335

outside

336  -  338

TMhelix

339  -  356

inside

357  -  368

TMhelix

369  -  391

outside

392  -  395

TMhelix

396  -  414

inside

415  -  452

 

 

Pi

237.744961

Theta

20.843617

Tajima's D

0.394305

CLR

0.597447

CSRT

0.485425728713564

Interpretation

Uncertain