Gene

KWMTBOMO02099  Validated by peptides from experiments

Annotation

putative_mitochondrial_ribosomal_protein?_L10?_partial_[Operophtera_brumata]

Location

Bomo_Chr4(+):12003858-12005075      View in EpiBrowser

Full name

39S ribosomal protein L10, mitochondrial      

Location in the cell

Mitochondrial   Reliability : 2.53

CDS

ATGTCATCATTAAAAAAAATTCTTTTAGAGCCTCGAGCATGTTTAGTCACAGCAAAGAGGTTTCGAGGGAAAATAAATATTCAAAGGCCAAGGCTGCCTCATTTCGAACGGCAGCTACTACTTGATCTATCAAAACCTAAATATGGTCCGCCCAAGTACACATTACCCGACTTTTTACTTTGCGACAGAGGAGAGAAAAAGAATAAAACAGAAATTGACAATCCCTTCGAAAGGATTTTGGCCAGAGAATGTTTGGAATGGTTTAATACATCCAAAATGATTGTGTTCTTACATGTAAACCCAATAACAATGGAGGACAAGACGCCAGTTTACGCTGCCTTAAATAAGAATAAAATGTATTTAAGAACCTATGGAAAAAAAATTGTAAGCCTTGCGACAAAAGGAACACGCTACGAAGTTGTCAATGAACTGTTTACCTCACATCAAAATATTATATTCGGTCAACCTGAAAATGCTGCAAAAATGTTTAAAATTTTGAAAAAAGCTCCACAGTTGGTTGTCATGGCTGGTGTAGTACAAGATCGTCTACTTTCAAAGAATGAACTTTTAGAGTTCAGCCAACTTCCAACCTTAGATTTGGCCAGAAGTAAGCTGTGTCAGGTTTTAGACAGTGCAGGCTCAGGTCTGGTCAGTCAATTGAATCGGAGTCAGCAAATTTTGGTATCCCATTTAGACAAACATGTTGAACAACAAAATTCAAGTATAGAAAAAAATGAAAACCAAGAAAGTTAA

Protein

MSSLKKILLEPRACLVTAKRFRGKINIQRPRLPHFERQLLLDLSKPKYGPPKYTLPDFLLCDRGEKKNKTEIDNPFERILARECLEWFNTSKMIVFLHVNPITMEDKTPVYAALNKNKMYLRTYGKKIVSLATKGTRYEVVNELFTSHQNIIFGQPENAAKMFKILKKAPQLVVMAGVVQDRLLSKNELLEFSQLPTLDLARSKLCQVLDSAGSGLVSQLNRSQQILVSHLDKHVEQQNSSIEKNENQES

Subunit

Component of the mitochondrial ribosome large subunit (39S) which comprises a 16S rRNA and about 50 distinct proteins.

Similarity

Belongs to the universal ribosomal protein uL10 family.

Keywords

Complete proteome   Mitochondrion   Reference proteome   Ribonucleoprotein   Ribosomal protein   Transit peptide  

Feature

chain  39S ribosomal protein L10, mitochondrial

Uniprot

A0A2A4J4T2   A0A2H1WZJ4   A0A0L7LVE7   A0A2W1BX68   A0A194QM66   A0A212ESU5   + More
A0A023ELF8   A0A182G6I7   A0A182G8W4   A0A084VSS0   Q16VU4   A0A1S4FMB3   A0A2M4AQ13   A0A1Q3F9N3   A0A182IR64   A0A2M4AQ03   U5EWM1   A0A2M4CPL8   A0A182F174   B0W712   A0A067QYU6   N6UJA4   A0A2M4BXL8   A0A0K8TRT9   A0A2M4BX47   A0A2M4BX24   A0A182Y6A5   A0A182NP25   W5JH64   A0A2J7QME7   A0A182SR20   A0A182MWV4   A0A1S4H3E8   B4LU66   A0A182KZ39   Q7PMH1   A0A182HR96   A0A182P7Z9   A0A182XGY0   A0A182W8R6   A0A182QYW5   A0A182TND7   A0A182RWR2   A0A182K6B7   A0A1L8DRI8   A0A182UTX2   A0A0L0BST8   W8AXM1   T1DPR2   D6WKZ4   B4Q5N7   B4P2A6   A0A1B0CHK1   B4ICT3   A0A0M5IW37   A0A1W4V3N0   A0A0A9WJL0   A0A1L8DRD2   B4MTV3   Q9VPL3   T1PD39   B4JBE9   A0A1I8MZH6   A0A0A1XLA7   A0A1I8QA68   A0A1W4WL21   A0A336ML41   A0A1J1I1B4   B3MUC5   A0A336MU45   A0A0K8U5H3   B4KHF3   A0A3B0K8L0   B3N787   A0A0R3NRE5   Q29NV5   A0A1Y1LHH9   A0A1A9W0K4   A0A023F7D4   A0A1B0FQ71   A0A1B0B4N7   A0A1A9VXN2   A0A1A9XDQ8   A0A1A9ZIW9   A0A0C9QN26   A0A0V0G9A1   A0A1B0GLX0   A0A0J7NP89   A0A1B6KNB0   A0A2R7X3B3   A0A0N7Z8U0   R4FLD8   A0A1B6KHQ5   A0A158NCY0   A0A3L8DKI3   A0A1B6H463   K7IUW8   A0A151J3F8  

Pubmed

26227816    28756777    26354079    22118469    24945155    26483478    + More
24438588    17510324    24845553    23537049    26369729    25244985    20920257    23761445    12364791    17994087    20966253    26108605    24495485    18362917    19820115    22936249    17550304    25401762    26823975    10731132    12537572    12537569    25315136    25830018    15632085    28004739    25474469    27129103    21347285    30249741    20075255   

EMBL

NWSH01003137    PCG66889.1    ODYU01011834    SOQ57804.1    JTDY01000025    KOB79349.1    + More
KZ149933    PZC77276.1    KQ461196    KPJ06454.1    AGBW02012723    OWR44560.1    GAPW01003520    JAC10078.1    JXUM01007570    KQ560243    KXJ83623.1    JXUM01048577    KQ561568    KXJ78132.1    ATLV01016140    KE525057    KFB41014.1    CH477580    EAT38715.1    GGFK01009539    MBW42860.1    GFDL01010765    JAV24280.1    GGFK01009540    MBW42861.1    GANO01002897    JAB56974.1    GGFL01002660    MBW66838.1    DS231851    EDS37286.1    KK853096    KDR11463.1    APGK01032734    KB740848    KB631797    ENN78717.1    ERL86216.1    GGFJ01008622    MBW57763.1    GDAI01000526    JAI17077.1    GGFJ01008488    MBW57629.1    GGFJ01008489    MBW57630.1    ADMH02001507    ETN62260.1    NEVH01013211    PNF29747.1    AXCM01001843    AAAB01008980    CH940649    EDW64053.1    EAA13853.5    APCN01001660    AXCN02001964    GFDF01005035    JAV09049.1    JRES01001418    KNC23107.1    GAMC01020996    GAMC01020994    GAMC01020992    JAB85561.1    GAMD01003119    JAA98471.1    KQ971343    EFA04041.1    CM000361    CM002910    EDX03187.1    KMY87261.1    CM000157    EDW87102.1    AJWK01012442    CH480829    EDW45359.1    CP012523    ALC38548.1    GBHO01035007    GBRD01011241    GDHC01000858    JAG08597.1    JAG54583.1    JAQ17771.1    GFDF01005058    JAV09026.1    CH963852    EDW75542.1    AE014134    AY060877    AY113438    KA645863    AFP60492.1    CH916368    EDW03972.1    GBXI01016281    GBXI01002555    JAC98010.1    JAD11737.1    UFQS01001257    UFQT01001257    SSX09997.1    SSX29719.1    CVRI01000038    CRK93995.1    CH902624    EDV33454.1    UFQT01001778    SSX31767.1    GDHF01030420    GDHF01020547    GDHF01016461    GDHF01007577    GDHF01004036    GDHF01003700    JAI21894.1    JAI31767.1    JAI35853.1    JAI44737.1    JAI48278.1    JAI48614.1    CH933807    EDW11217.1    OUUW01000006    SPP81966.1    CH954177    EDV57194.1    CH379058    KRT03627.1    GEZM01058215    GEZM01058214    JAV71790.1    GBBI01001557    JAC17155.1    CCAG010001738    JXJN01008377    GBYB01002062    JAG71829.1    GECL01001780    JAP04344.1    AJVK01009166    LBMM01002827    KMQ94315.1    GEBQ01027029    JAT12948.1    KK856490    PTY25890.1    GDKW01002411    JAI54184.1    ACPB03012597    GAHY01002144    JAA75366.1    GEBQ01028985    JAT10992.1    ADTU01012059    QOIP01000007    RLU20682.1    GECZ01012580    GECZ01000316    JAS57189.1    JAS69453.1    AAZX01001173    KQ980278    KYN16969.1   

Proteomes

UP000218220    UP000037510    UP000053240    UP000007151    UP000069940    UP000249989    + More
UP000030765    UP000008820    UP000075880    UP000069272    UP000002320    UP000027135    UP000019118    UP000030742    UP000076408    UP000075884    UP000000673    UP000235965    UP000075901    UP000075883    UP000008792    UP000075882    UP000007062    UP000075840    UP000075885    UP000076407    UP000075920    UP000075886    UP000075902    UP000075900    UP000075881    UP000075903    UP000037069    UP000007266    UP000000304    UP000002282    UP000092461    UP000001292    UP000092553    UP000192221    UP000007798    UP000000803    UP000001070    UP000095301    UP000095300    UP000192223    UP000183832    UP000007801    UP000009192    UP000268350    UP000008711    UP000001819    UP000091820    UP000092444    UP000092460    UP000078200    UP000092443    UP000092445    UP000092462    UP000036403    UP000015103    UP000005205    UP000279307    UP000002358    UP000078492   

PRIDE

Q9VPL3   

Pfam

PF00466   Ribosomal_L10        + More
PF00160   Pro_isomerase
PF00595   PDZ
PF12053   Par3_HAL_N_term

Interpro

IPR001790   Ribosomal_L10P        + More
IPR002130   Cyclophilin-type_PPIase_dom       
IPR020892   Cyclophilin-type_PPIase_CS       
IPR029000   Cyclophilin-like_dom_sf       
IPR021922   Par3/HAL_N       
IPR001478   PDZ       
IPR036034   PDZ_sf       

SUPFAM

SSF50891   SSF50891        + More
SSF50156   SSF50156       

Gene 3D

2.40.100.10    

CDD

cd05797  Ribosomal_L10

ProteinModelPortal

A0A2A4J4T2   A0A2H1WZJ4   A0A0L7LVE7   A0A2W1BX68   A0A194QM66   A0A212ESU5   + More
A0A023ELF8   A0A182G6I7   A0A182G8W4   A0A084VSS0   Q16VU4   A0A1S4FMB3   A0A2M4AQ13   A0A1Q3F9N3   A0A182IR64   A0A2M4AQ03   U5EWM1   A0A2M4CPL8   A0A182F174   B0W712   A0A067QYU6   N6UJA4   A0A2M4BXL8   A0A0K8TRT9   A0A2M4BX47   A0A2M4BX24   A0A182Y6A5   A0A182NP25   W5JH64   A0A2J7QME7   A0A182SR20   A0A182MWV4   A0A1S4H3E8   B4LU66   A0A182KZ39   Q7PMH1   A0A182HR96   A0A182P7Z9   A0A182XGY0   A0A182W8R6   A0A182QYW5   A0A182TND7   A0A182RWR2   A0A182K6B7   A0A1L8DRI8   A0A182UTX2   A0A0L0BST8   W8AXM1   T1DPR2   D6WKZ4   B4Q5N7   B4P2A6   A0A1B0CHK1   B4ICT3   A0A0M5IW37   A0A1W4V3N0   A0A0A9WJL0   A0A1L8DRD2   B4MTV3   Q9VPL3   T1PD39   B4JBE9   A0A1I8MZH6   A0A0A1XLA7   A0A1I8QA68   A0A1W4WL21   A0A336ML41   A0A1J1I1B4   B3MUC5   A0A336MU45   A0A0K8U5H3   B4KHF3   A0A3B0K8L0   B3N787   A0A0R3NRE5   Q29NV5   A0A1Y1LHH9   A0A1A9W0K4   A0A023F7D4   A0A1B0FQ71   A0A1B0B4N7   A0A1A9VXN2   A0A1A9XDQ8   A0A1A9ZIW9   A0A0C9QN26   A0A0V0G9A1   A0A1B0GLX0   A0A0J7NP89   A0A1B6KNB0   A0A2R7X3B3   A0A0N7Z8U0   R4FLD8   A0A1B6KHQ5   A0A158NCY0   A0A3L8DKI3   A0A1B6H463   K7IUW8   A0A151J3F8  

PDB

6GB2     E-value=1.53323e-15,     Score=199

KEGG

101739700    K02864 large subunit ribosomal protein L10 | (RefSeq) 39S ribosomal protein L10, mitochondrial

PATHWAY

03010    Ribosome - Bombyx mori (domestic silkworm)

GO

GO:0042254   GO:0005840   GO:0015934   GO:0005762   GO:0006412   GO:0003735   GO:1990904   GO:0032543   GO:0006457   GO:0003755  

PANTHER

PTHR11560  

Subcellular location

Mitochondrion  

Length:

250

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00102

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01674

outside

1  -  250

 

 

Pi

131.303381

Theta

185.744636

Tajima's D

-0.96158

CLR

1.997607

CSRT

0.148342582870856

Interpretation

Uncertain