Gene

KWMTBOMO02097  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003177

Annotation

Angio-associated_migratory_cell_protein_[Papilio_machaon]

Location

Bomo_Chr4(-):11980912-11985267      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.343

CDS

ATGCACGGGAATGAGCAAAACACACCGCCGTCGTCATTAAACGGAGACGAAATTACAAGTATGGAGGATGAGGGCGTAATTTACCTGGACGAAATGGATGAACTGGGTGATGAAGAAATGGAAGAGTTTCTTAGTCAAGAAGAAGAAGACATAGATATAGAACCCCCTGAAGATCATTCTGCACTAGTGTTCAGCAAACACGTGGGTTCTGTATTTTGTTGTGATCTCCACCCCAATGGTAAATTAGCAGTTACGGGTGGTGAAGACGATAAGGCTTATGTATGGTCAGTGGAATCTGGTCAAGTTGTACATGAATGTGTGAATCACAAGGACTCTGTTATATTTGTTGGATTCAGTTTTGATGGGTCTTACTTAGCTACAGTGGATATGTCTGGTGTAATTAAAGTATGGAAATACAGTGATGGAACAGATCCATGGCCACTTGCATTTGAATATATTGCAGATGACTTATCATTTGGCATGTGGCACTTTGGTGCTAAAGTTTTGATATGTGGGGCTGTTTCGGGAGATATCTACATTTTTAAAATACCTTCCGGCGAAACTAAAGTGCTTCAGGGGCATAATGTCAAAGTTGAATGTGCAAAGCTATTCACCGATGGTGTCCGAATGGCTGCTGGCTATGAAGATGGTACAGTCAAAATATGGGATATTAAAACATCAGCTGTGACACACCAATTACCAGCTAATGTCCATCAAATTAGAGTGACGGCAATTGACATTCACCCAGACAATAGTCTTATGGCTTCAATCTCTACAGATGGAAAAGTCATATTGACTACAACAAACAATGGGAAAATAGTTGGTGAGCTGCAAACCGAAAATGATCTAGAAACTGTTGCTTTTGCACAGGATCAACTATTAGGATTTTTAGCTTTAGGTACACTGACTGGCTCTGTGACAATATGGGACGTAGCAAGGCAGCTGTTAAGGCATCAATGTACAAAACCAGAAAATGAAGTCAACGGAGTTACTAAAATGTTTTGGGTGAAAAACAATCTGATGACAGGATGCCTGGATGGTTCCATACGAGCATACGAAGGCAGATCTGGTGAACAGTGTGTGATTTTGACGGGACACAGATCAGAAATTCTGGACCTCTGCTATAATGCTAAAGAGAATTTGATTCTCAGTACGTCTGATGATGGTTCTGCCAGAATATTCAAATATGATGTTTCTAGTGGAAATTAG

Protein

MHGNEQNTPPSSLNGDEITSMEDEGVIYLDEMDELGDEEMEEFLSQEEEDIDIEPPEDHSALVFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVESGQVVHECVNHKDSVIFVGFSFDGSYLATVDMSGVIKVWKYSDGTDPWPLAFEYIADDLSFGMWHFGAKVLICGAVSGDIYIFKIPSGETKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDIHPDNSLMASISTDGKVILTTTNNGKIVGELQTENDLETVAFAQDQLLGFLALGTLTGSVTIWDVARQLLRHQCTKPENEVNGVTKMFWVKNNLMTGCLDGSIRAYEGRSGEQCVILTGHRSEILDLCYNAKENLILSTSDDGSARIFKYDVSSGN

Uniprot

H9J0Z0   A0A2A4J622   A0A2W1BVQ2   A0A212ESY5   A0A194QNA3   A0A194PZD0   + More
S4PK93   A0A2H1WXL3   A0A0L7LVF0   A0A0N0U7B2   A0A310SBU1   K7J6H1   A0A088A1B2   A0A2A3ELX8   A0A2J7QME5   A0A0C9QES6   A0A0L7R5G6   A0A182QSA8   A0A1L8DNG4   A0A2M4AMF3   A0A2M4ANV8   A0A2M4AN70   A0A2M4ANF5   T1DK54   A0A2M4CU58   A0A2M4BT20   A0A2M4BS57   W4ZFD9   A0A182FBS1   A0A2M4CUE0   A0A2M3ZIK7   A0A182PAX4   A0A2M3Z9M8   A0A182N373   U5EVG7   A0A182VD92   A0A182HY01   A0A182LQ74   A0A182WXC6   A0A182R570   A0A182U7G2   Q7Q2X5   A0A084WBK9   A0A182YMG1   A0A336MI64   A0A2J7QMD7   A0A1B0GNR7   A0A1B6IUN7   Q16H53   A0A1B6FEG0   A0A1Q3F2F8   A0A1Q3F1Q5   A0A182ISP5   A0A182SG36   B0X780   A0A182W2C7   A0A182K4C1   A0A1B6KAD8   A0A182M044   A0A2G8L6Y6   C3Z098   A0A1B6E5H3   A0A2M4BV26   A0A1J1J8E6   A0A1I8N968   A0A182GAG2   T1P8Z5   U3F9A7   A0A0L0C0V8   A7SKP0   T2MDL7   A0A3M6UJY4   B7PFT8   A0A098M1R5   A0A1S3MWX0   A0A0P6FWJ1   A0A2D4LH99   A0A131XUP4   A0A026WTZ6   C0HBK3   A0A1S3H6L1   A0A1W7RJF0   A0A0B8RRR0   V5HSN8   A0A164XGJ6   A0A0L8IF34   A0A0P6F661   A0A1B0CML1   A0A0P4ZS96   A0A0K8RY39   C0HBS9   A0A3B3Q306   A0A3B3Q1N2   A0A0P5H1I2   A0A0N8C2Q3   J3SBT4   A0A0K8S3Y9   A0A2R5LNT1   T1DDQ2   B4LFL7  

Pubmed

19121390    28756777    22118469    26354079    23622113    26227816    + More
20075255    20966253    12364791    24438588    25244985    17510324    29023486    18563158    25315136    26483478    23915248    26108605    17615350    24065732    30382153    24508170    30249741    20433749    26358130    25476704    25765539    25727380    29240929    23025625    23758969    17994087   

EMBL

BABH01010482    NWSH01003137    PCG66890.1    KZ149933    PZC77277.1    AGBW02012723    + More
OWR44561.1    KQ461196    KPJ06455.1    KQ459583    KPI98692.1    GAIX01004630    JAA87930.1    ODYU01011834    SOQ57805.1    JTDY01000025    KOB79354.1    KQ435710    KOX79874.1    KQ764881    OAD54328.1    KZ288215    PBC32755.1    NEVH01013211    PNF29746.1    GBYB01001779    JAG71546.1    KQ414652    KOC66125.1    AXCN02001123    GFDF01006167    JAV07917.1    GGFK01008638    MBW41959.1    GGFK01008977    MBW42298.1    GGFK01008914    MBW42235.1    GGFK01008817    MBW42138.1    GAMD01001116    JAB00475.1    GGFL01004696    MBW68874.1    GGFJ01006777    MBW55918.1    GGFJ01006776    MBW55917.1    AAGJ04167456    GGFL01004697    MBW68875.1    GGFM01007529    MBW28280.1    GGFM01004470    MBW25221.1    GANO01001886    JAB57985.1    APCN01004449    AAAB01008966    EAA13033.4    ATLV01022365    KE525331    KFB47603.1    UFQT01001248    SSX29640.1    PNF29742.1    AJVK01013557    GECU01017094    JAS90612.1    CH478204    EAT33565.1    GECZ01021188    JAS48581.1    GFDL01013314    JAV21731.1    GFDL01013617    JAV21428.1    DS232441    EDS41774.1    GEBQ01031592    GEBQ01026323    JAT08385.1    JAT13654.1    AXCM01017185    MRZV01000192    PIK56008.1    GG666568    EEN53946.1    GEDC01004151    JAS33147.1    GGFJ01007477    MBW56618.1    CVRI01000070    CRL07185.1    JXUM01050861    KQ561665    KXJ77870.1    KA645167    AFP59796.1    GAEP01000119    GBEW01000072    JAB54702.1    JAI10293.1    JRES01001055    KNC25958.1    DS469689    EDO35758.1    HAAD01003914    CDG70146.1    RCHS01001388    RMX53879.1    ABJB010502123    DS704057    EEC05460.1    GBSI01000229    JAC96266.1    GDIQ01044622    JAN50115.1    IACM01016451    LAB20320.1    GEFM01004772    JAP71024.1    KK107105    QOIP01000011    EZA59540.1    RLU16960.1    BT059709    ACN11422.1    GDAY02000145    JAV51268.1    GBSH01000290    JAG68734.1    GANP01005451    JAB79017.1    LRGB01000996    KZS14208.1    KQ415849    KOG00112.1    GDIQ01060762    JAN33975.1    AJWK01018855    AJWK01018856    AJWK01018857    GDIP01210328    JAJ13074.1    GBKC01000222    JAG45848.1    BT059785    ACN11498.1    GDIQ01239293    JAK12432.1    GDIQ01231341    GDIQ01120635    JAL31091.1    JU173879    GBEX01000204    AFJ49405.1    JAI14356.1    GBKD01000133    JAG47485.1    GGLE01007028    MBY11154.1    GAAZ01000159    JAA97784.1    CH940647    EDW70335.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053240    UP000053268    UP000037510    + More
UP000053105    UP000002358    UP000005203    UP000242457    UP000235965    UP000053825    UP000075886    UP000007110    UP000069272    UP000075885    UP000075884    UP000075903    UP000075840    UP000075882    UP000076407    UP000075900    UP000075902    UP000007062    UP000030765    UP000076408    UP000092462    UP000008820    UP000075880    UP000075901    UP000002320    UP000075920    UP000075881    UP000075883    UP000230750    UP000001554    UP000183832    UP000095301    UP000069940    UP000249989    UP000037069    UP000001593    UP000275408    UP000001555    UP000087266    UP000053097    UP000279307    UP000085678    UP000076858    UP000053454    UP000092461    UP000261540    UP000008792   

PRIDE

H9J0Z0   

Pfam

PF00400   WD40        + More
PF17005   WD40_like
PF12894   ANAPC4_WD40

Interpro

IPR015943   WD40/YVTN_repeat-like_dom_sf        + More
IPR017986   WD40_repeat_dom       
IPR001680   WD40_repeat       
IPR019775   WD40_repeat_CS       
IPR036322   WD40_repeat_dom_sf       
IPR031544   WD40-like       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR024977   Apc4_WD40_dom       
IPR018391   PQQ_beta_propeller_repeat       
IPR020472   G-protein_beta_WD-40_rep       

SUPFAM

SSF50978   SSF50978        + More
SSF50998   SSF50998       

Gene 3D

2.130.10.10    

ProteinModelPortal

H9J0Z0   A0A2A4J622   A0A2W1BVQ2   A0A212ESY5   A0A194QNA3   A0A194PZD0   + More
S4PK93   A0A2H1WXL3   A0A0L7LVF0   A0A0N0U7B2   A0A310SBU1   K7J6H1   A0A088A1B2   A0A2A3ELX8   A0A2J7QME5   A0A0C9QES6   A0A0L7R5G6   A0A182QSA8   A0A1L8DNG4   A0A2M4AMF3   A0A2M4ANV8   A0A2M4AN70   A0A2M4ANF5   T1DK54   A0A2M4CU58   A0A2M4BT20   A0A2M4BS57   W4ZFD9   A0A182FBS1   A0A2M4CUE0   A0A2M3ZIK7   A0A182PAX4   A0A2M3Z9M8   A0A182N373   U5EVG7   A0A182VD92   A0A182HY01   A0A182LQ74   A0A182WXC6   A0A182R570   A0A182U7G2   Q7Q2X5   A0A084WBK9   A0A182YMG1   A0A336MI64   A0A2J7QMD7   A0A1B0GNR7   A0A1B6IUN7   Q16H53   A0A1B6FEG0   A0A1Q3F2F8   A0A1Q3F1Q5   A0A182ISP5   A0A182SG36   B0X780   A0A182W2C7   A0A182K4C1   A0A1B6KAD8   A0A182M044   A0A2G8L6Y6   C3Z098   A0A1B6E5H3   A0A2M4BV26   A0A1J1J8E6   A0A1I8N968   A0A182GAG2   T1P8Z5   U3F9A7   A0A0L0C0V8   A7SKP0   T2MDL7   A0A3M6UJY4   B7PFT8   A0A098M1R5   A0A1S3MWX0   A0A0P6FWJ1   A0A2D4LH99   A0A131XUP4   A0A026WTZ6   C0HBK3   A0A1S3H6L1   A0A1W7RJF0   A0A0B8RRR0   V5HSN8   A0A164XGJ6   A0A0L8IF34   A0A0P6F661   A0A1B0CML1   A0A0P4ZS96   A0A0K8RY39   C0HBS9   A0A3B3Q306   A0A3B3Q1N2   A0A0P5H1I2   A0A0N8C2Q3   J3SBT4   A0A0K8S3Y9   A0A2R5LNT1   T1DDQ2   B4LFL7  

KEGG

101739841    K14818 ribosome assembly protein SQT1 | (RefSeq) angio-associated migratory cell protein

GO

GO:0016787   GO:0042273   GO:0051082   GO:0016905   GO:0005515   GO:0016020   GO:0046873   GO:0009072   GO:0003824   GO:0006520   GO:0008483   GO:0006418   GO:0016507   GO:0048384  

Length:

402

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.08179

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02204

outside

1  -  402

 

 

Pi

272.777126

Theta

187.218742

Tajima's D

1.536089

CLR

0

CSRT

0.798510074496275

Interpretation

Uncertain