Gene

KWMTBOMO02096  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003178

Annotation

PREDICTED:_large_neutral_amino_acids_transporter_small_subunit_1_[Amyelois_transitella]

Location

Bomo_Chr4(-):11958983-11976297      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.989

CDS

ATGGCTAAAGTTGCCGACGTAGATGGATTAGCTCCCAAGGCTATCGAAAATGAAGTTGAAAGCAGTGATGGTGTCGAAAAAGGATCTGGTGGAGGTGTGCGATTGAAAAAAGAGTTGAGTCTAATGAACGGTGTGGCAATAATTGTGGGTGTAATAGTCGGATCAGGAATATTCGTTTCTCCAAGTTTGGCGCTAAAACATGCAGGTTCTAAAGGAATGGCTCTCATCGTGTGGGTTTTATCAGGATTCTTGTCCATGATAGGAGCGCTCTGTTATGCAGAGCTAGGTACGATGATCCCGAAATCTGGTGGGGATTACGCGTATATCGGTGAAGCGTTTGGTTCTCTACCGGCTTTTCTCTATCTGTGGGTTGCGCTCTTCATCCTTGTACCGACGGGAAACGCAATCACAGCCCTGACCTTCGCTGAAAACATCCTGAAGCCGTTATGGCCAGTTTGCAATCCTCCGGTCGTAGCAGTCAACCTTATTGCAGCCAGCATTACCTGTTTCCTGACAATAATTAACTGTTATAACGTGAAATGGGTGACGCGAGTTCAAGACTCGTTTACCGCTGCGAAAGTACTGGCGCTACTCGTGACATTCTTCGCGAGCTTGGTCTACTTATTCTCCGGACACACGGAAAACCTGCAGTACATGATGGAGAAAACAACAACGGATCCAGGGGAGATCGCTATAGCATTTTATACCGGCCTATTTTCGTATTCTGGCTGGAATTACCTGAACTTTGTTACTGAAGAACTGAAGGATCCCTACAAGAATCTTCCACGAGCTATCTGCATATCTATGCCGGTCGTGACCTTGGTCTACACGCTAACCAACGTCGCCTATTTCGCTGTATTGTCCAGTGACGAAATCCTTTCGTCCTCCGCCGTCGCTGTTACGTTCAGCGAGAAAATTCTCAAAATGATGTCTTGGATAATGCCGCTCTTCGTGGCTCTGTGTACATTTGGATCCCTCAACGGCGCCATATACACTTCCTCGCGACTTTTCTTCGTCGGTGCCAGGAACGGACATTTACCTTTGGCGATTTCACTCATAGACATCAAGAGGTTGACCCCGGTGCCTTCACTCATATTTATGTGCCTGGTCACCCTGCTGCTACTGCTGTCGAACGACATCGAAGCTCTGATGGTGTACGTGACTGCTGTCGAAGCGTTGTTCACCCTCTGCTCGGTGACCGGCTTGCTGTGGATGCGCTACACGCGACCACGCCTCCAGCGACCGATCCGCGTCAGTCTCGTCCTGCCCGCTATCTTCCTGATAACCTGCACATTTATTGTCATATGCTCGTGCTTTAAATACCCGAAGCACGTCGGCATCGGGGTCGCCTTCATAGCGCTGGGCGTCCCCATATACATGATATTCATCAAATGGCAGAATAAACCCAATTGGATATTAACAGCGTGCAATAGCTTCAATTTGGCGTGTTCCAAGCTGTTTTTGTGTTTACCCGAGGACTGCAAAGAATTATGA

Protein

MAKVADVDGLAPKAIENEVESSDGVEKGSGGGVRLKKELSLMNGVAIIVGVIVGSGIFVSPSLALKHAGSKGMALIVWVLSGFLSMIGALCYAELGTMIPKSGGDYAYIGEAFGSLPAFLYLWVALFILVPTGNAITALTFAENILKPLWPVCNPPVVAVNLIAASITCFLTIINCYNVKWVTRVQDSFTAAKVLALLVTFFASLVYLFSGHTENLQYMMEKTTTDPGEIAIAFYTGLFSYSGWNYLNFVTEELKDPYKNLPRAICISMPVVTLVYTLTNVAYFAVLSSDEILSSSAVAVTFSEKILKMMSWIMPLFVALCTFGSLNGAIYTSSRLFFVGARNGHLPLAISLIDIKRLTPVPSLIFMCLVTLLLLLSNDIEALMVYVTAVEALFTLCSVTGLLWMRYTRPRLQRPIRVSLVLPAIFLITCTFIVICSCFKYPKHVGIGVAFIALGVPIYMIFIKWQNKPNWILTACNSFNLACSKLFLCLPEDCKEL

Uniprot

H9J0Z1   A0A2A4J4H0   A0A2W1BQJ7   A0A194Q070   A0A194QSD7   A0A2H1X2C0   + More
A0A212FJV9   A0A1Y1KA98   N6U9P6   A0A232ERK8   E2BKM3   K7IXD9   A0A0L7QM92   A0A1I8NCV7   A0A1I8QED9   A0A0L0C122   A0A0K8U881   B4J2W6   A0A2A3E9V0   A0A088A296   A0A1B0GAQ3   A0A1A9YTC4   A0A1B0A6E0   A0A026WC57   W8AKL5   A0A1W4XEE1   A0A1Y0AWM1   U5EHX8   A0A1A9WTC3   D6WN13   E2A792   E0VEN0   A0A151I831   A0A336MVI9   A0A1B6D737   A0A158NJZ0   B3M5Q7   A0A154PMR5   A0A084WUS2   B4LFL6   A0A1A9VU07   A0A336M249   B4KXM6   A0A2J7QMB7   A0A182N371   B4PII9   B3NHK4   A0A1W4U8W7   A0A1J1J6S5   B4HHV5   Q9Y1A7   A0A3B0JTL0   B4GUH1   A0A195BHJ3   B5DQR8   B4QKH9   A0A3L8DNF1   A0A195DZ38   B4NM02   A0A0J9RWK9   F4WIK2   A0A151XEG5   A0A182QT17   A0A182IM50   A0A182W2C6   A0A182URT0   A0A2C9H3X7   A0A182LQ77   A0A182PAX5   A0A182HY00   A0A182LWL5   W5JDW3   A0A182UL39   A0A023F2Z4   Q16H52   A0A182R571   A0A182H8R0   A0A1L8DE69   A0A182KC11   A0A182GAG3   A0A1Q3G0T4   A0A1Q3G108   A0A1Q3G0H3   A0A1Q3G0L4   A0A1Q3G0Z7   A0A1Q3G0W5   A0A2M4A2S5   A0A1Q3G0J0   A0A1Q3G0K3   Q7Q2X6   A0A2M3Z3G9   A0A2M3ZGQ6   A0A182YMG2   T1DLD8   A0A023ETB0   A0A182FBS2   E9JCD9   A0A146L8N6   A0A0A9YVI6   A0A310SJC6  

Pubmed

19121390    28756777    26354079    22118469    28004739    23537049    + More
28648823    20798317    20075255    25315136    26108605    17994087    24508170    24495485    28341416    18362917    19820115    20566863    21347285    24438588    17550304    10727855    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    15632085    23185243    30249741    22936249    21719571    12364791    20966253    20920257    23761445    25474469    17510324    26483478    25244985    24945155    21282665    26823975    25401762   

EMBL

BABH01010482    BABH01010483    NWSH01003137    PCG66891.1    KZ149933    PZC77278.1    + More
KQ459583    KPI98693.1    KQ461196    KPJ06456.1    ODYU01012917    SOQ59459.1    AGBW02008222    OWR53990.1    GEZM01092432    GEZM01092431    JAV56555.1    APGK01037602    APGK01037603    KB740948    KB632288    ENN77371.1    ERL91483.1    NNAY01002581    OXU20999.1    GL448819    EFN83721.1    AAZX01000012    KQ414902    KOC59646.1    JRES01001055    KNC25957.1    GDHF01031203    GDHF01029447    GDHF01022579    GDHF01001097    JAI21111.1    JAI22867.1    JAI29735.1    JAI51217.1    CH916366    EDV97136.1    KZ288311    PBC28498.1    CCAG010015501    KK107282    EZA53558.1    GAMC01020188    GAMC01020184    JAB86367.1    KY921794    ART29383.1    GANO01002844    JAB57027.1    KQ971343    EFA03252.1    GL437314    EFN70702.1    DS235093    EEB11836.1    KQ978390    KYM94322.1    UFQT01002849    SSX34140.1    GEDC01015923    JAS21375.1    ADTU01018478    ADTU01018479    ADTU01018480    CH902618    EDV40691.1    KQ434991    KZC13175.1    ATLV01027105    KE525423    KFB53966.1    CH940647    EDW70334.1    UFQT01000416    SSX24120.1    CH933809    EDW19733.1    NEVH01013211    PNF29741.1    CM000159    EDW94546.1    CH954178    EDV51799.1    CVRI01000070    CRL07182.1    CH480815    EDW41520.1    AF139834    AE014296    AY069533    AAD39459.1    AAF49688.1    AAL39678.1    AAN11781.3    AAN11782.1    OUUW01000002    SPP76031.1    CH479191    EDW26254.1    KQ976465    KYM84275.1    CH379069    EDY73384.1    KRT07543.1    CM000363    EDX10490.1    QOIP01000006    RLU21964.1    KQ980031    KYN18155.1    CH964278    EDW85370.1    CM002912    KMY99643.1    KMY99644.1    GL888176    EGI65938.1    KQ982254    KYQ58648.1    AXCN02001123    AAAB01008966    APCN01004447    APCN01004448    AXCM01009262    ADMH02001789    ETN61085.1    GBBI01003124    JAC15588.1    CH478204    EAT33566.1    JXUM01029435    KQ560853    KXJ80622.1    GFDF01009409    JAV04675.1    JXUM01050863    KQ561665    KXJ77871.1    GFDL01001634    JAV33411.1    GFDL01001561    JAV33484.1    GFDL01001741    JAV33304.1    GFDL01001718    JAV33327.1    GFDL01001577    JAV33468.1    GFDL01001600    JAV33445.1    GGFK01001720    MBW35041.1    GFDL01001724    JAV33321.1    GFDL01001749    JAV33296.1    EAA13031.4    GGFM01002294    MBW23045.1    GGFM01006930    MBW27681.1    GAMD01000501    JAB01090.1    GAPW01001033    JAC12565.1    GL771786    EFZ09530.1    GDHC01013845    JAQ04784.1    GBHO01006557    JAG37047.1    KQ761976    OAD56413.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000019118    + More
UP000030742    UP000215335    UP000008237    UP000002358    UP000053825    UP000095301    UP000095300    UP000037069    UP000001070    UP000242457    UP000005203    UP000092444    UP000092443    UP000092445    UP000053097    UP000192223    UP000091820    UP000007266    UP000000311    UP000009046    UP000078542    UP000005205    UP000007801    UP000076502    UP000030765    UP000008792    UP000078200    UP000009192    UP000235965    UP000075884    UP000002282    UP000008711    UP000192221    UP000183832    UP000001292    UP000000803    UP000268350    UP000008744    UP000078540    UP000001819    UP000000304    UP000279307    UP000078492    UP000007798    UP000007755    UP000075809    UP000075886    UP000075880    UP000075920    UP000075903    UP000075882    UP000075885    UP000075840    UP000075883    UP000000673    UP000075902    UP000008820    UP000075900    UP000069940    UP000249989    UP000075881    UP000007062    UP000076408    UP000069272   

PRIDE

H9J0Z1    Q9Y1A7   

Pfam

PF13520   AA_permease_2        + More
PF07778   CENP-I

Interpro

IPR002293   AA/rel_permease1        + More
IPR012485   CENP-I       

ProteinModelPortal

H9J0Z1   A0A2A4J4H0   A0A2W1BQJ7   A0A194Q070   A0A194QSD7   A0A2H1X2C0   + More
A0A212FJV9   A0A1Y1KA98   N6U9P6   A0A232ERK8   E2BKM3   K7IXD9   A0A0L7QM92   A0A1I8NCV7   A0A1I8QED9   A0A0L0C122   A0A0K8U881   B4J2W6   A0A2A3E9V0   A0A088A296   A0A1B0GAQ3   A0A1A9YTC4   A0A1B0A6E0   A0A026WC57   W8AKL5   A0A1W4XEE1   A0A1Y0AWM1   U5EHX8   A0A1A9WTC3   D6WN13   E2A792   E0VEN0   A0A151I831   A0A336MVI9   A0A1B6D737   A0A158NJZ0   B3M5Q7   A0A154PMR5   A0A084WUS2   B4LFL6   A0A1A9VU07   A0A336M249   B4KXM6   A0A2J7QMB7   A0A182N371   B4PII9   B3NHK4   A0A1W4U8W7   A0A1J1J6S5   B4HHV5   Q9Y1A7   A0A3B0JTL0   B4GUH1   A0A195BHJ3   B5DQR8   B4QKH9   A0A3L8DNF1   A0A195DZ38   B4NM02   A0A0J9RWK9   F4WIK2   A0A151XEG5   A0A182QT17   A0A182IM50   A0A182W2C6   A0A182URT0   A0A2C9H3X7   A0A182LQ77   A0A182PAX5   A0A182HY00   A0A182LWL5   W5JDW3   A0A182UL39   A0A023F2Z4   Q16H52   A0A182R571   A0A182H8R0   A0A1L8DE69   A0A182KC11   A0A182GAG3   A0A1Q3G0T4   A0A1Q3G108   A0A1Q3G0H3   A0A1Q3G0L4   A0A1Q3G0Z7   A0A1Q3G0W5   A0A2M4A2S5   A0A1Q3G0J0   A0A1Q3G0K3   Q7Q2X6   A0A2M3Z3G9   A0A2M3ZGQ6   A0A182YMG2   T1DLD8   A0A023ETB0   A0A182FBS2   E9JCD9   A0A146L8N6   A0A0A9YVI6   A0A310SJC6  

PDB

6IRT     E-value=8.01291e-119,     Score=1094

KEGG

101739980    no KO assigned | (RefSeq) large neutral amino acids transporter small subunit 1

GO

GO:0022857   GO:0016021   GO:1903801   GO:0015179   GO:0007623   GO:0015171   GO:0005829   GO:0005654   GO:0008063   GO:0006865   GO:0016020   GO:0034508   GO:0000776   GO:0046873   GO:0009072   GO:0003824   GO:0006520   GO:0008483   GO:0006418   GO:0016507   GO:0048384   GO:0055085  

Length:

497

Number of predicted TMHs:

12

Exp number of AAs in TMHs:

259.06081

Exp number, first 60 AAs:

19.44696

Total prob of N-in:

0.98456

POSSIBLE N-term signal

sequence

inside

1  -  41

TMhelix

42  -  64

outside

65  -  73

TMhelix

74  -  96

inside

97  -  119

TMhelix

120  -  142

outside

143  -  156

TMhelix

157  -  179

inside

180  -  190

TMhelix

191  -  210

outside

211  -  229

TMhelix

230  -  252

inside

253  -  264

TMhelix

265  -  287

outside

288  -  308

TMhelix

309  -  331

inside

332  -  357

TMhelix

358  -  377

outside

378  -  381

TMhelix

382  -  404

inside

405  -  415

TMhelix

416  -  435

outside

436  -  444

TMhelix

445  -  463

inside

464  -  497

 

 

Pi

240.623768

Theta

189.54012

Tajima's D

0.218143

CLR

0.38982

CSRT

0.437078146092695

Interpretation

Uncertain