SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02095
Pre Gene Modal
BGIBMGA003180
Annotation
hypothetical_protein_KGM_09574_[Danaus_plexippus]
Location in the cell
PlasmaMembrane   Reliability : 3.907
 

Sequence

CDS
ATGTTGACAAAGTGCGCCGTCGTAGTCCTCGCGCTGACGCTCGTAGCTGCCGCCGTCTCGGCTAACTCCGAGCTAGACCTCAACAACACTATACCGGCGGAGCGATACTTCATTGACAAGATATTCAACAAGTACGGAGACAAAGGCATCATTACGTTTGAGGGATTCGAACACTTGTTAGCAAGTTTAGGCCTTGGCGGACGCGTGTTCAACTCACCTCATGATCTGGCCCTGCATCGCATCAATGGAACCTTTAGGCCACTTCACGACACCTTGCACAGACACCGACGCTCTCCGCCAGAAATTAGCTCTACAACCATACTACAGAAATCATGCCTTTCACCGAGAGAAATATTGGAAGTGTACGGAATGGAAAACGAGCCCGGGGTGATTACCATAAGACCGAAAACATTCTTGGAGATGTGTCCTGCACTTGTTTATCAATTGGATCAACGTTCGTGTTACAAAACTGAAGTATCTCCACCTAAATTAGATAAAATTTGGACCTGGATTTACGCCACCTTAGCAATTTTAGTGATTAGTGCCACGGGACTCCTGGGTGTAGCAATTGTCCCGCTACTAAAGTCAAAAATATTTAGCCACATATTGCATTTTCTGGTAGCTGTAGCCGTCGGAACACTTTGTGGCGACGCACTGCTACATCTTCTACCACATGCGTTGAAATCTCATGGTCCACCATCAGAACCGCAAGACGAAACAGAAGTGGTGCTTAAATGTAGCGTCACTTTTATCACAATTCTTTTCTTTTACACTGTTGAAGCGATCATGCAAACTGTCAATGGAGGTCATGCTCACTCACACGACCAAAATAAAGGTATTGAAGAAATCAAAACAGACTCGACCAAACAAATTGAGCCTATAGAATTAGGTGCTATGATGCCTGGGTCGCCTCCGCCGCCAATTGAACGACCAATGTCGTCCACTGCTTTAATGGTAATCGTTGGTGATGGATTACATAATCTGACTGATGGTTTGGCAATAGGAGCTGCGTTCAGTGGCGATCCGGTCACAGGATTTGCTACAGCTTTAGCAGTTTTCTGCCACGAGCTGCCACATGAACTGGGAGACTTCGCGGTACTACTCCGATCTGGTATGAGCATCAAGCGTGCTCTGTATTACAACTTACTATCTTCTGTGCTCAGCTTCATGGGAATGGCAGGCGGCATCTGGCTCGCTGAAGACCACGAATCGGCGTCACAGTGGATATACGCGGCGACCGCTGGAACTTTCTTTTACATCGCACTCGCCGATTTAGTTCCAGAAATAAATGAAAATAATAAAGGCAAAAGTGTTAACTTATTACTTGCGGTAATGGGTTTTCTAGCAGGCGGTGTGATCATGTTGCTCATTGCGTTACACGAAGACTCTATACAATATCTGTTTAGAAATGAAGAGAAATAA
Protein
MLTKCAVVVLALTLVAAAVSANSELDLNNTIPAERYFIDKIFNKYGDKGIITFEGFEHLLASLGLGGRVFNSPHDLALHRINGTFRPLHDTLHRHRRSPPEISSTTILQKSCLSPREILEVYGMENEPGVITIRPKTFLEMCPALVYQLDQRSCYKTEVSPPKLDKIWTWIYATLAILVISATGLLGVAIVPLLKSKIFSHILHFLVAVAVGTLCGDALLHLLPHALKSHGPPSEPQDETEVVLKCSVTFITILFFYTVEAIMQTVNGGHAHSHDQNKGIEEIKTDSTKQIEPIELGAMMPGSPPPPIERPMSSTALMVIVGDGLHNLTDGLAIGAAFSGDPVTGFATALAVFCHELPHELGDFAVLLRSGMSIKRALYYNLLSSVLSFMGMAGGIWLAEDHESASQWIYAATAGTFFYIALADLVPEINENNKGKSVNLLLAVMGFLAGGVIMLLIALHEDSIQYLFRNEEK

Summary

EMBL
ODYU01012037    SOQ58124.1    KZ149933    PZC77279.1    AGBW02013744    OWR42884.1    + More
KQ459583    KPI98694.1    KQ461196    KPJ06457.1    BABH01010486    NWSH01006457    PCG63421.1    JTDY01000025    KOB79355.1    KK852820    KDR15587.1    NEVH01001351    PNF42922.1    GFTR01006180    JAW10246.1    UFQT01000416    SSX24119.1    PNF42925.1    GFDF01009200    JAV04884.1    CH933809    EDW19732.1    OUUW01000002    SPP76029.1    CM000159    EDW94547.1    CH940647    EDW70333.1    GFDF01009546    JAV04538.1    CH916366    EDV97137.1    CM000363    CM002912    EDX10491.1    KMY99645.1    CH954178    EDV51800.1    AE014296    BT030430    AAF49687.2    ABO52850.1    ABW08542.1    CH379069    EAL30690.2    CH479191    EDW26253.1    CH480815    EDW41521.1    CH477488    EAT40100.1    AJWK01014885    CH478204    EAT33567.1    GAKP01016896    GAKP01016895    JAC42057.1    GECU01025438    JAS82268.1    GEBQ01027228    JAT12749.1    DS232762    EDS45497.1    DS235771    EEB16764.1    KRF84861.1    GECZ01029884    GECZ01026048    GECZ01025808    GECZ01017396    GECZ01014368    GECZ01012569    GECZ01011268    GECZ01008724    GECZ01007339    JAS39885.1    JAS43721.1    JAS43961.1    JAS52373.1    JAS55401.1    JAS57200.1    JAS58501.1    JAS61045.1    JAS62430.1    GFDL01000105    JAV34940.1    JXUM01021127    KQ560592    KXJ81745.1    GFDL01000145    JAV34900.1    GFDL01000139    JAV34906.1    GFDL01000138    JAV34907.1    CP012525    ALC43818.1    GFDL01000125    JAV34920.1    CH902618    EDV40690.1    KRK01909.1    GFDL01000141    JAV34904.1    GAMC01010074    JAB96481.1    UFQT01002849    SSX34139.1    GBHO01002235    JAG41369.1    GGFJ01002681    MBW51822.1    GGFJ01002663    MBW51804.1    AAAB01007181    EAA02909.4    AJVK01013553    AJVK01013554    AAAB01008966    EAA13010.4    GDHC01016579    JAQ02050.1    KA644885    AFP59514.1    GBHO01002234    JAG41370.1    GGFL01003132    MBW67310.1    GGFL01003107    MBW67285.1    GGFL01003106    MBW67284.1    ADMH02001789    ETN61084.1    AXCM01002708    AXCN02001123    APCN01004446    APCN01004447    CH964278    EDW85369.2    KK854125    PTY11742.1    ATLV01027105    KE525423    KFB53964.1    MRZV01000061    PIK60273.1    BX119991    BX957355    JARO02000522    KPP78276.1    KY652752    ATU31576.1    AB987999    BAP46892.1    GGFM01006282    MBW27033.1    RJVU01036174    ROL47020.1   
Pfam
PF02535   Zip        + More
PF10609   ParA
PF15054   DUF4535
PF18292   ZIP4_domain
Interpro
IPR003689   ZIP        + More
IPR000808   Mrp_CS       
IPR033756   YlxH/NBP35       
IPR019591   Mrp/NBP35_ATP-bd       
IPR027417   P-loop_NTPase       
IPR027854   STMP1       
IPR041137   ZIP4_N       
SUPFAM
SSF52540   SSF52540       
PDB
4X82     E-value=2.18472e-05,     Score=115

Ontologies

Topology

SignalP
Position:   1 - 21,         Likelihood:  0.995485
 
 
Length:
473
Number of predicted TMHs:
6
Exp number of AAs in TMHs:
144.27305
Exp number, first 60 AAs:
12.65291
Total prob of N-in:
0.67742
POSSIBLE N-term signal
sequence
outside
1  -  168
TMhelix
169  -  191
inside
192  -  197
TMhelix
198  -  220
outside
221  -  239
TMhelix
240  -  259
inside
260  -  376
TMhelix
377  -  399
outside
400  -  403
TMhelix
404  -  426
inside
427  -  437
TMhelix
438  -  460
outside
461  -  473
 
 

Population Genetic Test Statistics

Pi
242.148534
Theta
192.560977
Tajima's D
1.145899
CLR
0.262787
CSRT
0.698565071746413
Interpretation
Uncertain
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