Gene

KWMTBOMO02094

Annotation

PREDICTED:_ER_membrane_protein_complex_subunit_4_[Bombyx_mori]

Location

Bomo_Chr4(+):11915598-11916372      View in EpiBrowser

Full name

ER membrane protein complex subunit 4      

Location in the cell

Extracellular   Reliability : 1.152 Mitochondrial   Reliability : 1.394 Nuclear   Reliability : 1.088

CDS

ATGTCTCAGCTCAAATCAAATAAAAAACTTAAATGGGCTTTAGATTTTAATCAAAAGAATAAACAACTTTCAACAGAACTGCCCTCACCCCCAGGTTACAGTCAGTCTTCAAACGCTAATTATGCCGAATCATCAAAAGATTCGGACTCAAATTTACTCCTCATTAAAAAACTATGGGATGTGGCATTGGGCCCTTTGAAACAAGTACCCATGAATCTTTTTATTATGTACATGGCTGCACTCTATAAGTGTCAGAGTATGGGATTGTTACCAACTCACTCAAGTGATTGGTTGGCATTTGAAGAGCCTCAAACAAGACTCGAACATATTGGAGGTGGTTTATCACTTATATGA

Protein

MSQLKSNKKLKWALDFNQKNKQLSTELPSPPGYSQSSNANYAESSKDSDSNLLLIKKLWDVALGPLKQVPMNLFIMYMAALYKCQSMGLLPTHSSDWLAFEEPQTRLEHIGGGLSLI

Similarity

Belongs to the EMC4 family.

Uniprot

H9J0F0   A0A2W1BWU4   A0A2A4IW60   A0A2H1WYT5   A0A1E1WS28   S4PMQ9   + More
A0A194QLM3   A0A194PZF0   A0A212EN29   A0A0L7LV92   E2BIK7   A0A0V0GA20   A0A069DNL6   A0A0P4VXX8   A0A224XR37   A0A023F562   A0A1B6LJJ2   A0A151I7P3   E2A3R0   A0A151WIQ8   A0A1B6D529   A0A195EHZ2   A0A1B6HHH4   A0A026WU29   E9IBV9   A0A232FCK3   K7IPX1   F4W8J9   A0A195FBC4   A0A195BAS6   A0A158NK99   A0A0L0CRX8   A0A088A8C3   A0A2A3E8B6   A0A1Y1JRD9   A0A2H8TFC7   A0A0L7RIV1   A0A310S9U9   B4LDP8   B4KYK7   C4WVP4   B4J3R5   A0A1J1HQP9   A0A1I8P9J1   A0A2S2P9K0   Q2M0P4   B4GRC1   A0A0A9XGL3   A0A1B0GNR4   A0A2R7WIN1   A0A1I8NGA0   A0A3B0KU05   A0A1L8EDP9   A0A1W4UDS4   Q9VNQ3   A0A0J9S010   B4PIR0   B4IB52   E0VFN9   D6WMR9   A0A2P6KAW0   B4N533   A0A131ZYB5   A0A224YW58   A0A131YST2   L7LYL5   A0A131XJ24   B3NEG5   B3MB96   A0A336M1B7   B4QLB4   A0A023FU71   Q4PM88   A0A067R7V0   A0A0M4F0C0   A0A0C9RCA5   A0A034WQ08   A0A1Q3FCC5   A0A0C9S184   A0A0K8W7S6   A0A1E1X1T4   A0A0P6EVH2   A0A023FHH0   A0A1E1XUQ9   A0A1A9XBJ7   A0A1B0BAD0   A0A1A9Z3L5   D3TRM8   A0A1A9WS79   A0A1A9UXV4   A0A023GFI7   A0A0A1XIV5   A0A0P4X7T2   A0A2R5LJT5   E9GKX4   A0A2J7R2D3   A0A0J7NH07   A0A1W4XD66   F0J9E5  

Pubmed

19121390    28756777    23622113    26354079    22118469    26227816    + More
20798317    26334808    27129103    25474469    24508170    30249741    21282665    28648823    20075255    21719571    21347285    26108605    28004739    17994087    15632085    25401762    26823975    25315136    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    17550304    20566863    18362917    19820115    26555130    28797301    26830274    25576852    28049606    16431279    24845553    25348373    26131772    28503490    29209593    20353571    25830018    21292972    21362191   

EMBL

BABH01010486    KZ149933    PZC77280.1    NWSH01006457    PCG63422.1    ODYU01012037    + More
SOQ58126.1    GDQN01009304    GDQN01001337    GDQN01000767    JAT81750.1    JAT89717.1    JAT90287.1    GAIX01003425    JAA89135.1    KQ461196    KPJ06458.1    KQ459583    KPI98696.1    AGBW02013744    OWR42886.1    JTDY01000025    KOB79350.1    GL448516    EFN84454.1    GECL01001336    JAP04788.1    GBGD01003226    JAC85663.1    GDKW01002154    JAI54441.1    GFTR01002862    JAW13564.1    GBBI01002499    JAC16213.1    GEBQ01016159    JAT23818.1    KQ978406    KYM94151.1    GL436457    EFN71952.1    KQ983082    KYQ47732.1    GEDC01016528    JAS20770.1    KQ978881    KYN27776.1    GECU01033556    JAS74150.1    KK107105    QOIP01000011    EZA59532.1    RLU16725.1    GL762137    EFZ21932.1    NNAY01000436    OXU28405.1    GL887908    EGI69490.1    KQ981693    KYN37676.1    KQ976537    KYM81337.1    ADTU01018754    JRES01000005    KNC34947.1    KZ288325    PBC27997.1    GEZM01102880    JAV51752.1    GFXV01000970    MBW12775.1    KQ414584    KOC70671.1    KQ766586    OAD53658.1    CH940647    EDW70009.1    CH933809    EDW18818.1    ABLF02025561    AK341610    BAH71964.1    CH916366    EDV97296.1    CVRI01000018    CRK90392.1    GGMR01013510    MBY26129.1    CH379069    EAL30886.1    CH479188    EDW40306.1    GBHO01024803    GBRD01001327    GDHC01008776    JAG18801.1    JAG64494.1    JAQ09853.1    AJVK01013553    KK854847    PTY19201.1    OUUW01000012    SPP87398.1    GFDG01001997    JAV16802.1    AE014296    AY118945    AAF51870.1    AAM50805.1    ALI30496.1    CM002912    KMZ01242.1    CM000159    EDW95568.1    CH480826    EDW44515.1    DS235123    EEB12195.1    KQ971341    EFA04522.2    MWRG01017636    PRD23457.1    CH964101    EDW79472.1    JXLN01006172    KPM03796.1    GFPF01006884    MAA18030.1    GEDV01007027    JAP81530.1    GACK01008144    JAA56890.1    GEFH01002034    JAP66547.1    CH954178    EDV52800.1    CH902618    EDV41397.1    UFQT01000416    UFQT01002849    SSX24116.1    SSX34136.1    CM000363    EDX11532.1    GBBL01002098    JAC25222.1    DQ066239    AAY66876.1    KK852820    KDR15585.1    CP012525    ALC44537.1    GBYB01010732    JAG80499.1    GAKP01002683    GAKP01002682    JAC56270.1    GFDL01009907    JAV25138.1    GBZX01002226    JAG90514.1    GDHF01005389    JAI46925.1    GFAC01005971    JAT93217.1    GDIQ01070777    LRGB01002190    JAN23960.1    KZS08621.1    GBBK01003987    JAC20495.1    GFAA01000422    JAU03013.1    JXJN01010917    CCAG010018371    EZ424080    ADD20356.1    GBBM01002809    JAC32609.1    GBXI01015901    GBXI01003824    JAC98390.1    JAD10468.1    GDIP01245768    JAI77633.1    GGLE01005635    MBY09761.1    GL732550    EFX79756.1    NEVH01007831    PNF35000.1    LBMM01005108    KMQ91810.1    BK007496    DAA34440.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000037510    + More
UP000008237    UP000078542    UP000000311    UP000075809    UP000078492    UP000053097    UP000279307    UP000215335    UP000002358    UP000007755    UP000078541    UP000078540    UP000005205    UP000037069    UP000005203    UP000242457    UP000053825    UP000008792    UP000009192    UP000007819    UP000001070    UP000183832    UP000095300    UP000001819    UP000008744    UP000092462    UP000095301    UP000268350    UP000192221    UP000000803    UP000002282    UP000001292    UP000009046    UP000007266    UP000007798    UP000008711    UP000007801    UP000000304    UP000027135    UP000092553    UP000076858    UP000092443    UP000092460    UP000092445    UP000092444    UP000091820    UP000078200    UP000000305    UP000235965    UP000036403    UP000192223   

PRIDE

H9J0F0    Q9VNQ3   

Pfam

PF06417   DUF1077        + More
PF00501   AMP-binding
PF13193   AMP-binding_C
PF14668   RICTOR_V
PF14663   RasGEF_N_2
PF14664   RICTOR_N
PF14666   RICTOR_M

Interpro

IPR009445   TMEM85/Emc4        + More
IPR020845   AMP-binding_CS       
IPR042099   AMP-dep_Synthh-like_sf       
IPR000873   AMP-dep_Synth/Lig       
IPR025110   AMP-bd_C       
IPR029453   Rictor_IV       
IPR028267   Pianissimo_N       
IPR029452   RICTOR_V       
IPR028268   Pianissimo_fam       
IPR016024   ARM-type_fold       
IPR029451   RICTOR_M       

SUPFAM

SSF48371   SSF48371       

Gene 3D

3.40.50.12780    

ProteinModelPortal

H9J0F0   A0A2W1BWU4   A0A2A4IW60   A0A2H1WYT5   A0A1E1WS28   S4PMQ9   + More
A0A194QLM3   A0A194PZF0   A0A212EN29   A0A0L7LV92   E2BIK7   A0A0V0GA20   A0A069DNL6   A0A0P4VXX8   A0A224XR37   A0A023F562   A0A1B6LJJ2   A0A151I7P3   E2A3R0   A0A151WIQ8   A0A1B6D529   A0A195EHZ2   A0A1B6HHH4   A0A026WU29   E9IBV9   A0A232FCK3   K7IPX1   F4W8J9   A0A195FBC4   A0A195BAS6   A0A158NK99   A0A0L0CRX8   A0A088A8C3   A0A2A3E8B6   A0A1Y1JRD9   A0A2H8TFC7   A0A0L7RIV1   A0A310S9U9   B4LDP8   B4KYK7   C4WVP4   B4J3R5   A0A1J1HQP9   A0A1I8P9J1   A0A2S2P9K0   Q2M0P4   B4GRC1   A0A0A9XGL3   A0A1B0GNR4   A0A2R7WIN1   A0A1I8NGA0   A0A3B0KU05   A0A1L8EDP9   A0A1W4UDS4   Q9VNQ3   A0A0J9S010   B4PIR0   B4IB52   E0VFN9   D6WMR9   A0A2P6KAW0   B4N533   A0A131ZYB5   A0A224YW58   A0A131YST2   L7LYL5   A0A131XJ24   B3NEG5   B3MB96   A0A336M1B7   B4QLB4   A0A023FU71   Q4PM88   A0A067R7V0   A0A0M4F0C0   A0A0C9RCA5   A0A034WQ08   A0A1Q3FCC5   A0A0C9S184   A0A0K8W7S6   A0A1E1X1T4   A0A0P6EVH2   A0A023FHH0   A0A1E1XUQ9   A0A1A9XBJ7   A0A1B0BAD0   A0A1A9Z3L5   D3TRM8   A0A1A9WS79   A0A1A9UXV4   A0A023GFI7   A0A0A1XIV5   A0A0P4X7T2   A0A2R5LJT5   E9GKX4   A0A2J7R2D3   A0A0J7NH07   A0A1W4XD66   F0J9E5  

KEGG

101740248    no KO assigned | (RefSeq) ER membrane protein complex subunit 4

GO

GO:0016021   GO:0003824   GO:0012505   GO:0072546   GO:0034975   GO:0031932   GO:0031929  

PANTHER

PTHR19315   PTHR13298  

Length:

117

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.10373

Exp number, first 60 AAs:

0.03098

Total prob of N-in:

0.37043

outside

1  -  117

 

 

Pi

209.63748

Theta

190.927937

Tajima's D

0.308391

CLR

0

CSRT

0.453827308634568

Interpretation

Uncertain