Gene

KWMTBOMO02091  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003182

Annotation

PREDICTED:_NADH_dehydrogenase_(ubiquinone)_complex_I?_assembly_factor_6_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr4(-):11883942-11890547      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.362 Mitochondrial   Reliability : 1.473

CDS

ATGGGTTTGGGTAGTAATATAATTAATTTTAAGACATACAAAATACTTAAAATGCCAGCATTTACTACTAGATTTCTCTCAAAAATAGCAGAGTCTAACCAGGACTCACTAAATTACTGTGCAAATTTAGTAAGGCAGCACGATTATGAAAATTTTTTGGCCACACTGCTCCTGACAAAGGCTGTAAGATCTCCGACGCTTGTAGTCAGAGCCTTCAATGTAGAAGTAGCTCGTATACAAGATCAAACCACCGATTCTCAGACAGCAGCTTTCAGATTGCAGTTCTGGAATGATACACTTAAACTACTCTATAAAAATGATCAAACTTTAAAAAATATTCCAGCAAACCCCATAGCACAAGAGCTGTTTAAGGTGTGTAACTCTTGCAAACTCCCAAAAAGATATTTAGAAAGATTAATTACAGCGAGAGGAAACATATTGAAATCAAAACACTTTCAAAGCTTGGAAGATTTAGAGAAATATGCCGAAGATTCAGTTAGTTCCATCTACTACCTCATTCTTAGTATTTCTGACGTTACCAATGTACATGCTGACCATGCCGCTTCACATTTGGGAAAGGCACAAGGAATTGTAAACATACTAAGATCAGTACATGTTGCTAGTTATCATAAAACGGTAACCTTACCGATGAATACGTTAATGAAATATGGGATCAGCCAAGAAAACGTTTTGAGAGGTATCGACAATGAGAATATGAGAAATGTTGCATTTGAAATAGCCACCAGAGCTAACAGTCATTTAGAAAAGGCTCAGGCAATTGATGTACCAAAAAAAACAAAGCAAATATTTTTACCTGCAGTAGCAGTAAACGCGTACTTGAAAAAACTACAAAAATGTAATTTTAACTTATATGACAAATCTTTACAATTGGGTAACTCTACTCTGCCACTAAATCTATATTACAATAGATTAATGAATAAATATTAA

Protein

MGLGSNIINFKTYKILKMPAFTTRFLSKIAESNQDSLNYCANLVRQHDYENFLATLLLTKAVRSPTLVVRAFNVEVARIQDQTTDSQTAAFRLQFWNDTLKLLYKNDQTLKNIPANPIAQELFKVCNSCKLPKRYLERLITARGNILKSKHFQSLEDLEKYAEDSVSSIYYLILSISDVTNVHADHAASHLGKAQGIVNILRSVHVASYHKTVTLPMNTLMKYGISQENVLRGIDNENMRNVAFEIATRANSHLEKAQAIDVPKKTKQIFLPAVAVNAYLKKLQKCNFNLYDKSLQLGNSTLPLNLYYNRLMNKY

Uniprot

A0A2A4JKP6   A0A2H1W0T0   A0A2W1BZM8   A0A212EN33   A0A2A4JKS0   A0A1E1WGT4   + More
A0A194QNA8   A0A194Q074   A0A1B6E3J9   A0A1B6GRK5   A0A0P4VY62   R4FK79   A0A067QYX8   A0A182GV66   A0A182GQ33   E9FYX2   A0A0N7Z8V5   Q16X99   A0A0P5QLZ1   A0A0P5L111   A0A0P6IB09   A0A2J7R2E3   A0A1Y1K5Y6   K7IQ97   A0A232EX85   A0A2S2PLH9   A0A182KC83   A0A1J1I9A6   A0A0P5M030   A0A2H8TPH4   J9JYI3   A0A182VKN7   A0A0S7MI35   A0A3B3XEF7   A0A3P9PZJ0   A0A195E783   A0A2S2PY58   A0A182XBT5   A0A182MWH7   A0A3B3V7I6   Q7PS32   A0A2R2MP92   A0A182UDE4   A0A151I133   A0A182HMW9   B0W9G6   A0A182P8J4   U5ESL9   A0A182Q1J6   A0A336LQ12   T1IUF8   M4AGK9   A0A182SY24   E2A9L2   A0A158NG19   A0A087XB06   E2BN04   A0A146ZRC3   A0A0L0G8M4   A0A182N0H7   A0A2D0S159   F4X6K2   A0A131YTV9   A0A2D0S146   A0A1A8R664   A0A1A8MUG2   A0A182YK31   A0A224Z2V6   A0A1A8G210   A0A195F152   F1QP26   A0A0C9R1R5   A0A1A8AE03   A0A1A8KSF2   U4TZC1   A0A1A8BUC5   Q4V8Q6   A0A3B3CQ33   A0A0D2WP63   A0A3P9BPK9   A0A131YBA3   A0A1A7X550   A0A3P8NHA1   J3JUC7   A0A182J4S7   D6WN19   H2MKN3   A0A3P9IS88   A0A0L7R795   A0A146R0I6   A0A146LCH1   N6T7V9   I3IZ45   A0A3P9MGI4   A0A315VMZ9   A0A2K6GST9   B3N1D7  

Pubmed

28756777    22118469    26354079    24845553    26483478    21292972    + More
27129103    17510324    28004739    20075255    28648823    12364791    14747013    17210077    23542700    20798317    21347285    21719571    26830274    25244985    28797301    23594743    23537049    29451363    25186727    22516182    18362917    19820115    17554307    26823975    29703783    17994087   

EMBL

NWSH01001239    PCG72003.1    ODYU01005642    SOQ46700.1    KZ149933    PZC77283.1    + More
AGBW02013744    OWR42888.1    PCG72002.1    GDQN01004862    JAT86192.1    KQ461196    KPJ06460.1    KQ459583    KPI98698.1    GEDC01004829    JAS32469.1    GECZ01004705    JAS65064.1    GDRN01088085    JAI60921.1    ACPB03007690    GAHY01001983    JAA75527.1    KK852820    KDR15582.1    JXUM01090419    KQ563838    KXJ73195.1    JXUM01079645    KQ563138    KXJ74414.1    GL732527    EFX87698.1    GDKW01002291    JAI54304.1    CH477545    EAT39219.1    GDIP01223743    GDIQ01133045    JAI99658.1    JAL18681.1    GDIQ01185279    JAK66446.1    GDIQ01008791    JAN85946.1    NEVH01007831    PNF35010.1    GEZM01094181    JAV55838.1    NNAY01001780    OXU22939.1    GGMR01017656    MBY30275.1    CVRI01000044    CRK96863.1    GDIQ01171687    JAK80038.1    GFXV01004240    MBW16045.1    ABLF02019952    GBYX01021311    JAP01403.1    KQ979568    KYN20956.1    GGMS01001156    MBY70359.1    AXCM01002316    AAAB01008846    EAA06250.6    KQ976580    KYM79898.1    APCN01004922    DS231864    EDS40191.1    GANO01003187    JAB56684.1    AXCN02001411    UFQT01000107    SSX20092.1    JH431533    GL437917    EFN69902.1    ADTU01014889    AYCK01014953    GL449382    EFN82908.1    GCES01017440    JAR68883.1    KQ241706    KNC85360.1    GL888818    EGI57962.1    GEDV01007216    JAP81341.1    HAEH01014854    SBS01187.1    HAEF01019133    SBR60292.1    GFPF01010125    MAA21271.1    HAEB01017877    SBQ64404.1    KQ981864    KYN34193.1    BX294187    GBYB01000786    JAG70553.1    HADY01013970    HAEJ01017996    SBP52455.1    HAED01021241    HAEE01015098    SBR35148.1    KB631899    ERL86959.1    HADZ01006472    HAEA01013022    SBP70413.1    BC097249    AAH97249.1    KE346363    KJE92383.1    GEFM01000034    JAP75762.1    HADW01011640    SBP13040.1    BT126840    AEE61802.1    KQ971343    EFA03248.1    KQ414642    KOC66745.1    GCES01124443    JAQ61879.1    GDHC01013280    JAQ05349.1    APGK01040871    KB740984    ENN76314.1    AERX01041099    NHOQ01001373    PWA24923.1    CH902654    EDV33576.1   

Proteomes

UP000218220    UP000007151    UP000053240    UP000053268    UP000015103    UP000027135    + More
UP000069940    UP000249989    UP000000305    UP000008820    UP000235965    UP000002358    UP000215335    UP000075881    UP000183832    UP000007819    UP000075903    UP000261480    UP000242638    UP000078492    UP000076407    UP000075883    UP000261500    UP000007062    UP000085678    UP000075902    UP000078540    UP000075840    UP000002320    UP000075885    UP000075886    UP000002852    UP000075901    UP000000311    UP000005205    UP000028760    UP000008237    UP000054560    UP000075884    UP000221080    UP000007755    UP000076408    UP000078541    UP000000437    UP000030742    UP000261560    UP000008743    UP000265160    UP000265100    UP000075880    UP000007266    UP000001038    UP000265200    UP000053825    UP000019118    UP000005207    UP000265180    UP000233160    UP000007801   

Interpro

IPR008949   Isoprenoid_synthase_dom_sf       

SUPFAM

SSF48576   SSF48576       

Gene 3D

1.10.600.10    

ProteinModelPortal

A0A2A4JKP6   A0A2H1W0T0   A0A2W1BZM8   A0A212EN33   A0A2A4JKS0   A0A1E1WGT4   + More
A0A194QNA8   A0A194Q074   A0A1B6E3J9   A0A1B6GRK5   A0A0P4VY62   R4FK79   A0A067QYX8   A0A182GV66   A0A182GQ33   E9FYX2   A0A0N7Z8V5   Q16X99   A0A0P5QLZ1   A0A0P5L111   A0A0P6IB09   A0A2J7R2E3   A0A1Y1K5Y6   K7IQ97   A0A232EX85   A0A2S2PLH9   A0A182KC83   A0A1J1I9A6   A0A0P5M030   A0A2H8TPH4   J9JYI3   A0A182VKN7   A0A0S7MI35   A0A3B3XEF7   A0A3P9PZJ0   A0A195E783   A0A2S2PY58   A0A182XBT5   A0A182MWH7   A0A3B3V7I6   Q7PS32   A0A2R2MP92   A0A182UDE4   A0A151I133   A0A182HMW9   B0W9G6   A0A182P8J4   U5ESL9   A0A182Q1J6   A0A336LQ12   T1IUF8   M4AGK9   A0A182SY24   E2A9L2   A0A158NG19   A0A087XB06   E2BN04   A0A146ZRC3   A0A0L0G8M4   A0A182N0H7   A0A2D0S159   F4X6K2   A0A131YTV9   A0A2D0S146   A0A1A8R664   A0A1A8MUG2   A0A182YK31   A0A224Z2V6   A0A1A8G210   A0A195F152   F1QP26   A0A0C9R1R5   A0A1A8AE03   A0A1A8KSF2   U4TZC1   A0A1A8BUC5   Q4V8Q6   A0A3B3CQ33   A0A0D2WP63   A0A3P9BPK9   A0A131YBA3   A0A1A7X550   A0A3P8NHA1   J3JUC7   A0A182J4S7   D6WN19   H2MKN3   A0A3P9IS88   A0A0L7R795   A0A146R0I6   A0A146LCH1   N6T7V9   I3IZ45   A0A3P9MGI4   A0A315VMZ9   A0A2K6GST9   B3N1D7  

KEGG

101740605    K18163 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 6 | (RefSeq) NADH dehydrog

GO

GO:0005739   GO:0032981   GO:0016021   GO:0005743   GO:0050821   GO:0016740   GO:0009058   GO:0005524   GO:0005737   GO:0006430   GO:0003676   GO:0004812   GO:0006418   GO:0016507   GO:0048384  

Length:

315

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01071

Exp number, first 60 AAs:

0.00261

Total prob of N-in:

0.01195

outside

1  -  315

 

 

Pi

274.345457

Theta

211.005662

Tajima's D

0.110203

CLR

127.694687

CSRT

0.398230088495575

Interpretation

Possibly Positive selection