SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02078
Pre Gene Modal
BGIBMGA003188
Annotation
PREDICTED:_uncharacterized_protein_LOC101743190_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.952
 

Sequence

CDS
ATGAAGCTCAGACATGCAAATGAGAATGGCAACGTCGATATAATTGAGACTCAAGACATCACCCTGCACAGAAACACCAACGATCGTAACACTAGGGCAATATCAAGGAAAATTTACGAAAACATCGACAATTCAGAATACAATTCAAATTTTAATGTAGTATATGACACAAGAAACCGTACTGAAACTTTCTTAAACTTTAAAACTTCTTCTAGAACAGATAACTATGAAAGTGCAAATGTGAACGTTGGAGCAGTCGTATGTAACAGACAGTATAGAATTAATACTTGTAAAGTTATTGCTTACAAAACAATTAACAGTGAAGCTGTAAATCTGGAGGATACTGGAAAAATTCACACTGCACACCCAAGCTTTTTAGAAAGCCCTAATGCCTTATCTGATGTCACGCCTGTTGATGACGAACGGGCGTTTGAACAGTCAGATTCAGATGAGATGTCTGAAAACGGTATCCATCCTGTACCTAGAGGTATCGTGAATCCAAATTATCCAGGCTTTCAACATTTAGCTCATACTCTACAGGATTATTCGTCTAATATAGAAAACTTTTATCATTCTGATAATGAAATGACTGATGATGATGTTGATTTAGAAATTACTGAAGTAGAATCAGAAAACAATCAAAAAGGAGTAACATGCAAAAATAACAACAACAATAGTCTTAGTACCATTACATTTACAAAATTGACATCTTCACAAAATGATATAACATTCGAAACAAAAACATTAGATAGACAGATCAAAAATGAAATGCCCGACTTACTAAAGACAGTTCCAAAAAATATTAATAACAACAATGAAATCTGTTGTTTTGAATTAAATTGCTCAGATACAGACATAGAAAACAACTTTCATACAAAAGAAATAATTGGTGATTTTAATAAAGAGATTGAAGAAGAAATTCGAGAACTTCTCAACTATAACATTAACATTCAAGATGATTTAGAAGAATTACGAAAAGATATTAACGACACTCTTGTTAAACCTATAGAAAACACGATCAACAATATCAGCGAAGTAGTTAACCACGTCATAAAGAAACTTGTAGAAAATCAAGGAACGTTCATAGATCAACATGAAGATTTGCCGTTAGCAGAAGCTATATGTTACACAGAAGAGCGAGATGTTGTGGATGAGATTAGTAAAATTAATAAAGAAAATGAAAAAAATGCTAGGACCGAAATGAATTTAAATAGGCCTACATTTTTGTACATAGAAAATAGCTTAACCGCGAGCGGTAAAATTTCAGATGCGTTTTTGTCGGATGGAAAAGATGAAATAAATGTCAGTGAATATGATACGGAAAAGCTATCTTTAAATGTGGAAAATACTATCAAACAATTGAGCACCGAACTGAGGAAGATTATTCCTAAATTAGATGAAATGCGAGAACGTGATAAACTTTGGGCTGAAAATAGAAGGTTCACGGACTCCGTTGTTAAAGATGGAAATTCTAATGAAATTCAGAGCTACTCGAAACGTAATATTTTATCTAGTAGTTCAACTGTAAAAGACAAAAGTGATATTAAAAAAGTTGGATTTTCTAATTCTACTATTAGGAACGCTCCAAAAATGTCTCAAAGAGGTCCAAGGGACCGTTTTAGAGAGCCGAAAAATAGTAATAGCAGTGCTCAAAGTAAAATATCCGTCCATGGTGATAAGGTCACCAAAGAGATTGACTTAGAGAGTTTTGATGTATACAATATTGAGACTGCTTTACCTAAATTAGATTTGGATGCTATCGAAAGTCATCTTAAAGCAGCCAAAGAAGCGGAACGTCGGAAACGTAATGATAGAGAGGAAATTAGAAGGCGTTTGGCTATGGGAGCAGATGCAGATGAATACTTCAGTATGGGACACACAGAGCGCCCAGGGAAAAAACCTAGCTTACAGTCTCGACTTCAAAGTGGGATGAATCTGCAAATTTGTTTTATGAATGAAACAGCATCGGAAAATGAATTTCAAGATTTGGACAAGAATGTAAATTATGAAACAAAAAGTCTTTCACAATCCAGTCTTTTCAGTAAATTAAACTATAACCATCCTTATCAGACAAGGCCATTGTCGGTCAATATAACAAAACATGACAAAATTAGCACTCTTCAGAGCGGTGCGAAATTGCGTCCATCAGCTTTACAAAAGAATAATAAGTCCCGTTCTTCACACTCGTTGGGTCATATTGAGCTGAAAGAGTCAGATTTTTATGCACTACAGGCGACACTTCAGACCGAGGCGCGGATTGCGCTGGCCCAAGCAAAAGAAATGGCACGTATTCAAATGGAGCATGAACGTCGCAGCCGTCCGGTGTCGCCCGTGACCGAAATGTTAAGACGTAGCATGGAGAAGGCAAGCGCGCCGTTAGCTGCTGATCGACGTCGGGTATCCCGACAGCTGCTCACCGATATGAATATTGCACAGTTGCAGGTGATCGTGAACGAGTTGCATTCGCAGATTGAATCGCTAAACGACAGTCTGGTGAAACTTTTGATGGCTCGTGACGAGCTGCACATGGGTCAAGATTCCATGCTCGTTGACATCGAGGATCTCACTCGTTATTTGGGTGTAAAAGAGCAAACCAAGAAGACAAAAGGCTCCAAATCTGGTATGAAGAGGCTTACATCGTTAGTGAAGTAA
Protein
MKLRHANENGNVDIIETQDITLHRNTNDRNTRAISRKIYENIDNSEYNSNFNVVYDTRNRTETFLNFKTSSRTDNYESANVNVGAVVCNRQYRINTCKVIAYKTINSEAVNLEDTGKIHTAHPSFLESPNALSDVTPVDDERAFEQSDSDEMSENGIHPVPRGIVNPNYPGFQHLAHTLQDYSSNIENFYHSDNEMTDDDVDLEITEVESENNQKGVTCKNNNNNSLSTITFTKLTSSQNDITFETKTLDRQIKNEMPDLLKTVPKNINNNNEICCFELNCSDTDIENNFHTKEIIGDFNKEIEEEIRELLNYNINIQDDLEELRKDINDTLVKPIENTINNISEVVNHVIKKLVENQGTFIDQHEDLPLAEAICYTEERDVVDEISKINKENEKNARTEMNLNRPTFLYIENSLTASGKISDAFLSDGKDEINVSEYDTEKLSLNVENTIKQLSTELRKIIPKLDEMRERDKLWAENRRFTDSVVKDGNSNEIQSYSKRNILSSSSTVKDKSDIKKVGFSNSTIRNAPKMSQRGPRDRFREPKNSNSSAQSKISVHGDKVTKEIDLESFDVYNIETALPKLDLDAIESHLKAAKEAERRKRNDREEIRRRLAMGADADEYFSMGHTERPGKKPSLQSRLQSGMNLQICFMNETASENEFQDLDKNVNYETKSLSQSSLFSKLNYNHPYQTRPLSVNITKHDKISTLQSGAKLRPSALQKNNKSRSSHSLGHIELKESDFYALQATLQTEARIALAQAKEMARIQMEHERRSRPVSPVTEMLRRSMEKASAPLAADRRRVSRQLLTDMNIAQLQVIVNELHSQIESLNDSLVKLLMARDELHMGQDSMLVDIEDLTRYLGVKEQTKKTKGSKSGMKRLTSLVK

Summary

Pfam
PF10148   SCHIP-1
Interpro
IPR015649   SCHIP_1_C        + More
IPR039045   SCHIP_1       

Ontologies

GO

Topology

Length:
883
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00006
outside
1  -  883
 
 

Population Genetic Test Statistics

Pi
305.807082
Theta
201.382412
Tajima's D
1.929313
CLR
0.279637
CSRT
0.870356482175891
Interpretation
Uncertain
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