Gene

KWMTBOMO02070

Pre Gene Modal

BGIBMGA003192

Annotation

PREDICTED:_E3_ubiquitin-protein_ligase_MIB1_[Bombyx_mori]

Location

Bomo_Chr4(-):11385153-11423397      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.011

CDS

ATGGAGAGTAATATCTCTGTTTCATCAACATCATCTAGACCAACCCGTTTTATGATGGAAGGAGTAGGAGCTCGTGTGATTCGAGGTCCAGATTGGAAGTGGGGAAAACAGGATGGAGGAGAGGGCCATCTTGGCACTGTAAGGAATTTTGAGTCTCCAGAAGAAGTAGTAGTCGTTTGGGATAATGGAACAGCTGCAAATTATAGATGTTCAGGTGCCTATGATCTGCGGATTCTGGATAGTGCCCCTACTGGTGTGAAACATGAAGGAACTATGTGTGATACTTGCAGGCAACAACCCATATTTGGTATACGTTGGAAATGTGCTGAATGCAGCAATTATGATCTATGCTCTGTCTGCTATCATGGAGATAAACATAATTTACGTCATAGATTTTATAGAATTAGTGCACCAGGGGCACAACGATGTTTGGTTGAACCACGAAGAAAAAGTAAAAAACAGGCTGTCAGGGGTATCTTTCCAGGAGCCAGAGTCGTAAGAGGGGTGGATTGGCAGTGGGAAGATCAAGATGGTGGAAATTGTAGGCGTGGAAAAGTCAATGAAATCCAAGATTGGTCAGCAGCTAGTCCACGATCTGCTGCATATGTTGTGTGGGATAATGGTGCCAAAAATCTCTACAGGGTAGGCTTTGAGGGAATGGCTGACCTGAAGGCCGTTAATGATGTGAAAGGTCAGAATGTGTACAAGGAACACTTGCCATTGCTAGGCGAACTTGGCCCTGGAAGAACAGGCCCACATGGACTACAAGTTGGTGATCAGGTGAATGTAGACCTTGATCTTGAAATAGTACAGTCACTACAACATGGTCATGGTGGTTGGACAGATGGTATGTTCGAGTGTCTCGGCACCACCGGTACTGTGGTTGGCATAGATGAGGACCACGACATTGTTGTAACTTATCCAAGCGGAAATAGGTGGACATTTAACCCTGCTGTTTTAACTAAGATATTCAGCGGCGCGTACACGACGACGAGCCCGACGGGCGGCGCGGGCGCGGCGGGTGCGGGCGGAGGGTTCGCGGTGGGAGACCTCGTGCAGGTCTGCGCCGACCAGGAGCGGGTCAAGGCGCTGCAGCGAGGACACGGGGAGTGGGCCGAGGCCATGGCACCTACTCTTGGCAAGATAGGACGAGTGCAGCAGATTTATCACGACAACGATCTAAAGGTGGAAGTGTGTAATACGTCATGGACGTACAATCCGAACGCGGTGACAAAAGTTGCGTCGTCCGATGGCAGCATTCCGGGAAACTCTTCAGGTGAACGGTTATCGGCGCTTTTAAAAAAGTTATTTGAATCCCACGTGACCGGAGACGCAAACGAGGAGCTGGTGAAGGCGGCCGCCAATGGCGACGCGACGCGCTGCGCCGAGATACTGGCGCGCACCGACGGCGCACAGGCTGACGTCAACGGCTTCTACGGCGGACACACCGCGCTGCAGGCGGCCGCGCAGAACGGCCACGTGGAGGTGATCCGCGCGCTGGTGGAGGCGGGCGCGGAGGTGGACGCGGAGGACCGCGACGGGGACCGCGCCGCGCACCACGCCGCCTTCGGGGACGAGCCGGCCGCCCTGCGCGCGCTGGGCGCCGCCGCCGCCGACCTCAACGCGCGCAACCGCCGCCGCCAGACGCCGCTGCACATCGCCGTCAACAAGGGACACCTCGGCGTCGTGCGCACGCTGCTGCAGCTCGCCGTGCACCCCGCCCTGCAGGACTCTGAAGGCGATACACCCCTGCATGATGCCATTTCAAAAAAGCGTGACGACATGCTAACGCTGCTACTAGAACATGGAGCCGATATGACCCTAACAAACAATAATGGTTTCAACGCTCTGCATCACGCGGCGCTCCGCGGCAATCCAAGGTAA

Protein

MESNISVSSTSSRPTRFMMEGVGARVIRGPDWKWGKQDGGEGHLGTVRNFESPEEVVVVWDNGTAANYRCSGAYDLRILDSAPTGVKHEGTMCDTCRQQPIFGIRWKCAECSNYDLCSVCYHGDKHNLRHRFYRISAPGAQRCLVEPRRKSKKQAVRGIFPGARVVRGVDWQWEDQDGGNCRRGKVNEIQDWSAASPRSAAYVVWDNGAKNLYRVGFEGMADLKAVNDVKGQNVYKEHLPLLGELGPGRTGPHGLQVGDQVNVDLDLEIVQSLQHGHGGWTDGMFECLGTTGTVVGIDEDHDIVVTYPSGNRWTFNPAVLTKIFSGAYTTTSPTGGAGAAGAGGGFAVGDLVQVCADQERVKALQRGHGEWAEAMAPTLGKIGRVQQIYHDNDLKVEVCNTSWTYNPNAVTKVASSDGSIPGNSSGERLSALLKKLFESHVTGDANEELVKAAANGDATRCAEILARTDGAQADVNGFYGGHTALQAAAQNGHVEVIRALVEAGAEVDAEDRDGDRAAHHAAFGDEPAALRALGAAAADLNARNRRRQTPLHIAVNKGHLGVVRTLLQLAVHPALQDSEGDTPLHDAISKKRDDMLTLLLEHGADMTLTNNNGFNALHHAALRGNPR

Uniprot

A0A2A4K825   A0A2H1WYW2   A0A067QXM4   A0A1B6L2V7   A0A158NK40   A0A3L8DMJ2   + More
A0A195BIS2   A0A088A2Y4   T1IMQ6   A0A1S3K889   A0A0C9RRG6   A0A1S3IWZ1   A0A195F4F6   A0A1S3K8D5   A0A0P4W1M4   A0A2R5LM51   A0A087T2H4   A0A210QJB6   A0A0N8EAU7   A0A0P4XZ39   A0A0P5LK51   A0A0P5L012   A0A0P5H436   A0A0P6H0L9   A0A165A7T5   A0A0N8C9Q3   A0A0P5JK59   A0A0P5QQ02   A0A0P4XVE7   A0A0P5YD86   A0A0P4ZHZ0   A0A0P5N877   A0A0P6EFF0   A0A0P5IE16   A0A0P5K2I7   A0A2T7NNH6   A0A0P5I4X8   A0A0N8B2C8   K1QEY5   A0A0P5TUW7   A0A0P5I8G9   A0A0P5DUB9   A0A0N8DKE9   A0A0P5R4A7   A0A0P5R7A7   A0A0P5Q991   A0A0P5YTS7   A0A131YG45   A0A0P5D2Z2   A0A0N8CDC2   A0A0P5DGS8   A0A224YXG4   A0A0P5VYU5   A0A0P5UKB3   A0A147BPD1   A0A0P5NJF4   A0A0P5G0C5   A0A0P5XCK9   A0A1Y1KUT7   A0A131XRY8   A0A139WH71   A0A0P5LCI5   A0A1W4X289   A0A0P6DP87   A0A0P5QEQ0   A0A1S4FUL6   Q16NN6   A0A182H367   A0A182PCA1   A0A182JPY1   A0A084WII2   A0A182J119   A0A182FB79   W5JW25   A0A0P5RS99   A0A182QLH9   A0A182Y9I2   A0A2M4A7V1   A0A182N2S7   A0A0U2UAP2   A0A336KUF3   A0A1L8DSE2   A0A182RVG4   A0A182LWW5   A0A182WE12   A0A1Q3FAY6   A0A146LRU8   A0A182HHM1   Q7PZI6   A0A182UTQ6   A0A023F2T6   A0A182L569   A0A0P6HXA4   A0A0P4VNN6   A0A182U438   A0A0A9WIY7   A0A0A1WVB5   A0A0V0G4N4   A0A069DZQ0   A0A1I8MXZ1  

Pubmed

24845553    21347285    30249741    28812685    22992520    26830274    + More
28797301    29652888    28004739    18362917    19820115    17510324    26483478    24438588    20920257    23761445    25244985    26580012    26823975    12364791    25474469    20966253    27129103    25401762    25830018    26334808    25315136   

EMBL

NWSH01000081    PCG79810.1    ODYU01012057    SOQ58156.1    KK852840    KDR15200.1    + More
GEBQ01021905    JAT18072.1    ADTU01018529    ADTU01018530    ADTU01018531    ADTU01018532    ADTU01018533    ADTU01018534    QOIP01000006    RLU21640.1    KQ976465    KYM84257.1    JH431092    GBYB01009931    JAG79698.1    KQ981820    KYN35266.1    GDRN01079950    JAI62310.1    GGLE01006382    MBY10508.1    KK113087    KFM59313.1    NEDP02003363    OWF48875.1    GDIQ01044892    JAN49845.1    GDIP01238623    JAI84778.1    GDIQ01177145    JAK74580.1    GDIQ01177146    JAK74579.1    GDIQ01231689    GDIQ01072636    JAK20036.1    GDIQ01036547    JAN58190.1    LRGB01000642    KZS17276.1    GDIQ01101035    JAL50691.1    GDIQ01201904    JAK49821.1    GDIQ01121032    GDIQ01080234    GDIQ01030329    JAL30694.1    GDIP01237263    JAI86138.1    GDIP01059388    JAM44327.1    GDIP01216412    JAJ06990.1    GDIQ01157055    JAK94670.1    GDIQ01063440    JAN31297.1    GDIQ01214682    JAK37043.1    GDIQ01216236    JAK35489.1    PZQS01000010    PVD22714.1    GDIQ01218490    JAK33235.1    GDIQ01219635    JAK32090.1    JH817657    EKC29654.1    GDIP01121320    JAL82394.1    GDIQ01217338    JAK34387.1    GDIP01157523    JAJ65879.1    GDIP01025055    JAM78660.1    GDIQ01115226    JAL36500.1    GDIQ01114020    JAL37706.1    GDIQ01138969    JAL12757.1    GDIP01053491    GDIP01053490    JAM50224.1    GEDV01010273    JAP78284.1    GDIP01163669    JAJ59733.1    GDIP01142871    JAL60843.1    GDIP01156479    JAJ66923.1    GFPF01007498    MAA18644.1    GDIP01093278    JAM10437.1    GDIP01111675    JAL92039.1    GEGO01002788    JAR92616.1    GDIQ01151706    JAL00020.1    GDIQ01253080    JAJ98644.1    GDIP01074090    JAM29625.1    GEZM01075200    JAV64211.1    GEFM01006946    JAP68850.1    KQ971343    KYB27259.1    GDIQ01171703    JAK80022.1    GDIQ01089274    JAN05463.1    GDIQ01136519    JAL15207.1    CH477816    EAT35949.1    JXUM01106761    JXUM01106762    JXUM01106763    KQ565082    KXJ71361.1    ATLV01023934    KE525347    KFB50026.1    ADMH02000120    ETN67713.1    GDIQ01115225    JAL36501.1    AXCN02001087    GGFK01003397    MBW36718.1    KT984258    ALR88655.1    UFQS01000833    UFQT01000833    SSX07125.1    SSX27468.1    GFDF01004688    JAV09396.1    AXCM01001233    GFDL01010356    JAV24689.1    GDHC01008081    JAQ10548.1    APCN01002428    AAAB01008986    EAA00278.4    GBBI01003368    JAC15344.1    GDIQ01020721    JAN74016.1    GDKW01000313    JAI56282.1    GBHO01038787    GBHO01038784    JAG04817.1    JAG04820.1    GBXI01011822    JAD02470.1    GECL01003773    JAP02351.1    GBGD01000255    JAC88634.1   

Proteomes

UP000218220    UP000027135    UP000005205    UP000279307    UP000078540    UP000005203    + More
UP000085678    UP000078541    UP000054359    UP000242188    UP000076858    UP000245119    UP000005408    UP000007266    UP000192223    UP000008820    UP000069940    UP000249989    UP000075885    UP000075881    UP000030765    UP000075880    UP000069272    UP000000673    UP000075886    UP000076408    UP000075884    UP000075900    UP000075883    UP000075920    UP000075840    UP000007062    UP000075903    UP000075882    UP000075902    UP000095301   

Pfam

PF00569   ZZ        + More
PF18346   SH3_15
PF12796   Ank_2
PF06701   MIB_HERC2
PF00023   Ank

Interpro

IPR037252   Mib_Herc2_sf        + More
IPR010606   Mib_Herc2       
IPR001841   Znf_RING       
IPR000433   Znf_ZZ       
IPR002110   Ankyrin_rpt       
IPR020683   Ankyrin_rpt-contain_dom       
IPR013083   Znf_RING/FYVE/PHD       
IPR042056   MIB1/2_ZZ       
IPR036770   Ankyrin_rpt-contain_sf       
IPR040847   SH3_15       
IPR009030   Growth_fac_rcpt_cys_sf       

SUPFAM

SSF48403   SSF48403        + More
SSF159034   SSF159034       
SSF57184   SSF57184       

Gene 3D

1.25.40.20     2.30.30.920     3.30.40.10    

CDD

cd02339  ZZ_Mind_bomb
cd00204  ANK

ProteinModelPortal

A0A2A4K825   A0A2H1WYW2   A0A067QXM4   A0A1B6L2V7   A0A158NK40   A0A3L8DMJ2   + More
A0A195BIS2   A0A088A2Y4   T1IMQ6   A0A1S3K889   A0A0C9RRG6   A0A1S3IWZ1   A0A195F4F6   A0A1S3K8D5   A0A0P4W1M4   A0A2R5LM51   A0A087T2H4   A0A210QJB6   A0A0N8EAU7   A0A0P4XZ39   A0A0P5LK51   A0A0P5L012   A0A0P5H436   A0A0P6H0L9   A0A165A7T5   A0A0N8C9Q3   A0A0P5JK59   A0A0P5QQ02   A0A0P4XVE7   A0A0P5YD86   A0A0P4ZHZ0   A0A0P5N877   A0A0P6EFF0   A0A0P5IE16   A0A0P5K2I7   A0A2T7NNH6   A0A0P5I4X8   A0A0N8B2C8   K1QEY5   A0A0P5TUW7   A0A0P5I8G9   A0A0P5DUB9   A0A0N8DKE9   A0A0P5R4A7   A0A0P5R7A7   A0A0P5Q991   A0A0P5YTS7   A0A131YG45   A0A0P5D2Z2   A0A0N8CDC2   A0A0P5DGS8   A0A224YXG4   A0A0P5VYU5   A0A0P5UKB3   A0A147BPD1   A0A0P5NJF4   A0A0P5G0C5   A0A0P5XCK9   A0A1Y1KUT7   A0A131XRY8   A0A139WH71   A0A0P5LCI5   A0A1W4X289   A0A0P6DP87   A0A0P5QEQ0   A0A1S4FUL6   Q16NN6   A0A182H367   A0A182PCA1   A0A182JPY1   A0A084WII2   A0A182J119   A0A182FB79   W5JW25   A0A0P5RS99   A0A182QLH9   A0A182Y9I2   A0A2M4A7V1   A0A182N2S7   A0A0U2UAP2   A0A336KUF3   A0A1L8DSE2   A0A182RVG4   A0A182LWW5   A0A182WE12   A0A1Q3FAY6   A0A146LRU8   A0A182HHM1   Q7PZI6   A0A182UTQ6   A0A023F2T6   A0A182L569   A0A0P6HXA4   A0A0P4VNN6   A0A182U438   A0A0A9WIY7   A0A0A1WVB5   A0A0V0G4N4   A0A069DZQ0   A0A1I8MXZ1  

PDB

4XIB     E-value=0,     Score=1630

KEGG

101743326    K10645 E3 ubiquitin-protein ligase mind-bomb [EC:2.3.2.27] | (RefSeq) E3 ubiquitin-protein ligase MI

GO

GO:0008270   GO:0004842   GO:0016874   GO:0046872   GO:0006897   GO:0016567   GO:0005737   GO:0007219   GO:0005515   GO:0003676   GO:0005739   GO:0006635   GO:0016507   GO:0048384  

Length:

627

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00837999999999998

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00065

outside

1  -  627

 

 

Pi

266.172149

Theta

188.234526

Tajima's D

1.23188

CLR

0.006845

CSRT

0.722013899305035

Interpretation

Uncertain