Gene

KWMTBOMO02065

Pre Gene Modal

BGIBMGA002974

Annotation

PREDICTED:_conserved_oligomeric_Golgi_complex_subunit_6_[Amyelois_transitella]

Location

Bomo_Chr4(+):11255037-11257091      View in EpiBrowser

Full name

Conserved oligomeric Golgi complex subunit 6      

Alternative Name

Component of oligomeric Golgi complex 6

Location in the cell

Nuclear   Reliability : 2.812

CDS

ATGGAGACATATACGGCAAATCCCATCAGACAAAGAATCAATAAAATATTTGACAACCACATAGCTTCAGATAGTACAGATGCTTTGCATTCTGTATCAGGATTATGCTCCTCTAACTCTGCATACACGCGAAGAGTACTTGTGAACGAAATAGAGAAAAGAGACACACTTGTGAATAAAGCCGTATTAGCAGAGTATAGAAAAGTCAAAGATAAATTTCAGTCCTTACTTGATTCTCTGGACTCACTCAATTCAGCAGTCAATGACATGTCGAAAAGATTAAATGATTCTAAAACAAAAACACACCACTTGATTACCCAGACCACTAATTTAAAGGATGAAAGAAAAAAAACAGAAAAGAAACTAGTTTGGGTGAATGCGTATGTGAACAGTTTTCAACTTAGTCCAGATAAAATTGATTACCTTTGTAATGTGTCGATAAAAACACCACTTACCTTGGATTTCTTTAAAACTCTATCACTAATTGAAAAATTGTATGAAAATTGTAAAGTACTAGTCAGATGTTGGTATGAAACTTCAGCATTTGATATAATGGAAATAGTGGGCTTGCAACAAGAGGTTGCAATAGAAAAGCTTTATCATTGGACAATTGGAGCTTGCCTCAGCACAGATTCCCCTAATAATGCTCTTATCCCCTTGGCTTTAGCTAAATTTCAAAATAGGCAAGTTCTTTTTAGTAATATAATTGATGAATATTGTTCAGCTAGAAAAGCTACAATAGTTCAATTATTTATTGATGCCCTAACTAAAGAAACGGAAACTGTTCCAAAACCAATTGAATTTTACGCTAATGATCCTAAGAGATATATTGGTGATATTTTAGCTTGGGTGTATCAAATTATTCCAATAGAAAAAGAAAATTTGCAAATTTTATATAAACACTGTAATATGTCTGATAAAAAACAATACATTATTGAAGCTTTGATTAGCATAATGGAAGCTATATGCCCCTTATTAAAAATTAGGGCTGAACTTATATTAAAACCTGATAAAGATCCATTAGTGTTATGGTCAATTACACATCAAATAATTTATTACAAAGAAGTAATTCAAGCTATCATACCTAAAGGACATTTAATAAACACTCTGGATGAGCTACTAAAAAAGAGTGAAGATGTATTTCTTATGACATTAGACAGCAAAATACAAAAAGAATTGAGCCATGGAGTGAAAGCACCACCAGTGGATTTAAATCCATCGATAGTAGTAACTGACTTGGTCAGTTTCCTGAGAGATCTTTTGACTATTATGAACAGCTCTAACAACTTCAATATATCTGAGAGGAAAATGATTGTTACTCACATTTTAGATCCATTACTACAATCAGTCAATGAAACTGCTTGTCATCTGAGTCCTACGGATATGTCTGTTTATATGTTGAATTGTATTTATCACATACAGTGCACTTTATCCTTATATACATTAATGGATGAATATAATGAGAGACTACAGGCACAATCAGAAGCCCAGATTGATACATTGACATCAGAGCAAGCTAGTTATTTAGTTGCAAATTTAAATCTGGGCCCGATTTACACAATATTACAAGAAAAGATTAGTGGGCCACTCTCAGCCATTCCAGGGATGGATACGTCAACTCTAAAAACATTCTTAAACAAATTTGATACATTTTTATTAGGACCAGATTCTTATATTTTACCGCAGCTCAATTTGCTTTTAAGTCACTCTCATAAATTGGGTGTGAAGAAGAGAGCTTTTGAAGTAATACTAGCTATTTATGAACAATTGTATAAAGCTATTCATGACCCTAATAATGGTTACACAGATCATTTGTCTATTGTAAAGAGAACTCCAGATGAAGTCAACAAATTGTTGAAATAA

Protein

METYTANPIRQRINKIFDNHIASDSTDALHSVSGLCSSNSAYTRRVLVNEIEKRDTLVNKAVLAEYRKVKDKFQSLLDSLDSLNSAVNDMSKRLNDSKTKTHHLITQTTNLKDERKKTEKKLVWVNAYVNSFQLSPDKIDYLCNVSIKTPLTLDFFKTLSLIEKLYENCKVLVRCWYETSAFDIMEIVGLQQEVAIEKLYHWTIGACLSTDSPNNALIPLALAKFQNRQVLFSNIIDEYCSARKATIVQLFIDALTKETETVPKPIEFYANDPKRYIGDILAWVYQIIPIEKENLQILYKHCNMSDKKQYIIEALISIMEAICPLLKIRAELILKPDKDPLVLWSITHQIIYYKEVIQAIIPKGHLINTLDELLKKSEDVFLMTLDSKIQKELSHGVKAPPVDLNPSIVVTDLVSFLRDLLTIMNSSNNFNISERKMIVTHILDPLLQSVNETACHLSPTDMSVYMLNCIYHIQCTLSLYTLMDEYNERLQAQSEAQIDTLTSEQASYLVANLNLGPIYTILQEKISGPLSAIPGMDTSTLKTFLNKFDTFLLGPDSYILPQLNLLLSHSHKLGVKKRAFEVILAIYEQLYKAIHDPNNGYTDHLSIVKRTPDEVNKLLK

Description

Required for normal Golgi function.

Subunit

Component of the conserved oligomeric Golgi complex.
Component of the conserved oligomeric Golgi complex which is composed of eight different subunits and is required for normal Golgi morphology and localization.

Similarity

Belongs to the COG6 family.

Keywords

Alternative splicing   Complete proteome   Golgi apparatus   Membrane   Protein transport   Reference proteome   Transport  

Feature

chain  Conserved oligomeric Golgi complex subunit 6
splice variant  In isoform Short.

Uniprot

A0A2A4K721   A0A2H1VCY8   A0A1E1VZ28   A0A194QMB5   H9J0D8   A0A194PRI0   + More
A0A212EK59   D6WE56   A0A067RCD7   A0A1W4XTB0   A0A158N8W7   A0A195B4M4   A0A2J7RK71   A0A195FP13   A0A151J0D6   A0A1W4XU77   F4WMN4   A0A026W603   A0A3L8DB65   E2AIA7   A0A1Y1KXQ7   A0A1I8NBV2   A0A1I8NN97   T1PIK2   A0A088AU02   A0A0N0U6E8   A0A2A3E4A3   A0A0L0C1L7   A0A0L7QZV6   E2C0I0   A0A195CU49   A0A310SN24   W8AYX1   A0A0A1WYV4   A0A0J9R8U4   A0A0K8VGX9   Q9V564   B4HSQ6   A0A1W4UY24   B4J7Y0   B3N2A1   A0A0M3QV97   B4P403   B4LJ86   B4KPP7   A0A034VI89   B3N7I4   B4NNA7   E9J7W7   B4GHR6   Q28ZH5   W5JX60   A0A182K7T9   K7J084   A0A232FJP8   Q7QJN1   A0A2M4ANH0   A0A182I3K4   A0A2M4BHF4   A0A182XZ54   A0A1W4XJ68   A0A182X3G3   A0A182URD1   A0A182TW01   A0A1B0ABU7   D3TMS7   A0A182QEM4   A0A182JAU9   A0A182WIL9   A0A182LWZ2   A0A1A9UZ39   A0A1A9X3N5   A0A182FI63   A0A154P8Q6   A0A084VWX6   A0A1Q3F6J5   A0A2M4BIA3   A0A0J7N695   A0A2M4BIA5   A0A182P3P1   A0A1B0DFS2   A0A1A9YML4   A0A1B0BYX5   A0A1L8DW82   A0A1B0CU27   A0A0P4VXK5   A0A023F0A6   A0A069DVG5   A0A182GMB1   A0A182NHH5   B0VZV1   A0A182GST4   A0A0P5ZFL6   A0A0V0G4J8   A0A0P5NAP9   A0A1S4EZ30   Q17KR7   E9GI72  

Pubmed

26354079    19121390    22118469    18362917    19820115    24845553    + More
21347285    21719571    24508170    30249741    20798317    28004739    25315136    26108605    24495485    25830018    22936249    10731132    12537572    12537569    17994087    17550304    18057021    25348373    21282665    15632085    20920257    23761445    20075255    28648823    12364791    14747013    17210077    25244985    20353571    24438588    27129103    25474469    26334808    26483478    17510324    21292972   

EMBL

NWSH01000081    PCG79816.1    ODYU01001874    SOQ38685.1    GDQN01011067    JAT79987.1    + More
KQ461196    KPJ06499.1    BABH01010532    KQ459601    KPI93740.1    AGBW02014319    OWR41877.1    KQ971318    EFA00369.1    KK852598    KDR20532.1    ADTU01008865    KQ976618    KYM79225.1    NEVH01002981    PNF41221.1    KQ981382    KYN42193.1    KQ980658    KYN14730.1    GL888218    EGI64511.1    KK107455    EZA50469.1    QOIP01000010    RLU17576.1    GL439754    EFN66818.1    GEZM01070948    JAV66162.1    KA648596    AFP63225.1    KQ435729    KOX77702.1    KZ288721    PBC26086.1    JRES01001012    KNC26146.1    KQ414676    KOC64086.1    GL451797    EFN78539.1    KQ977279    KYN04213.1    KQ762864    OAD55396.1    GAMC01016498    GAMC01016497    JAB90058.1    GBXI01010491    JAD03801.1    CM002911    KMY92492.1    GDHF01027311    GDHF01014145    JAI25003.1    JAI38169.1    AE013599    AY061082    CH480816    EDW47083.1    CH916367    EDW02210.1    CH902874    EDV29964.1    CP012524    ALC42039.1    CM000157    EDW89486.2    CH940648    EDW61522.1    KRF80034.1    CH933808    EDW09157.1    GAKP01017704    GAKP01017703    GAKP01017702    GAKP01017700    JAC41248.1    CH954177    EDV59389.2    CH964282    EDW85846.1    GL768663    EFZ11086.1    CH479183    EDW36036.1    CM000071    EAL25638.1    ADMH02000091    ETN67849.1    NNAY01000123    OXU30760.1    AAAB01008807    EAA04773.3    GGFK01009013    MBW42334.1    APCN01000214    GGFJ01003282    MBW52423.1    CCAG010011926    EZ422729    ADD19005.1    AXCN02000595    AXCM01001229    KQ434846    KZC08306.1    ATLV01017806    KE525192    KFB42470.1    GFDL01011854    JAV23191.1    GGFJ01003648    MBW52789.1    LBMM01009317    KMQ88215.1    GGFJ01003649    MBW52790.1    AJVK01033488    JXJN01022880    GFDF01003405    JAV10679.1    AJWK01028342    AJWK01028343    AJWK01028344    GDKW01001202    JAI55393.1    GBBI01003784    JAC14928.1    GBGD01000801    JAC88088.1    JXUM01074221    KQ562818    KXJ75063.1    DS231815    EDS35193.1    JXUM01085224    KQ563489    KXJ73754.1    GDIP01044805    JAM58910.1    GECL01003166    JAP02958.1    GDIQ01167358    JAK84367.1    CH477221    EAT47341.1    GL732546    EFX80822.1   

Proteomes

UP000218220    UP000053240    UP000005204    UP000053268    UP000007151    UP000007266    + More
UP000027135    UP000192223    UP000005205    UP000078540    UP000235965    UP000078541    UP000078492    UP000007755    UP000053097    UP000279307    UP000000311    UP000095301    UP000095300    UP000005203    UP000053105    UP000242457    UP000037069    UP000053825    UP000008237    UP000078542    UP000000803    UP000001292    UP000192221    UP000001070    UP000007801    UP000092553    UP000002282    UP000008792    UP000009192    UP000008711    UP000007798    UP000008744    UP000001819    UP000000673    UP000075881    UP000002358    UP000215335    UP000007062    UP000075840    UP000076408    UP000076407    UP000075903    UP000075902    UP000092445    UP000092444    UP000075886    UP000075880    UP000075920    UP000075883    UP000078200    UP000091820    UP000069272    UP000076502    UP000030765    UP000036403    UP000075885    UP000092462    UP000092443    UP000092460    UP000092461    UP000069940    UP000249989    UP000075884    UP000002320    UP000008820    UP000000305   

PRIDE

H9J0D8    Q9V564   

Pfam

PF06419   COG6        + More
PF02185   HR1
PF00313   CSD

Interpro

IPR010490   COG6        + More
IPR016159   Cullin_repeat-like_dom_sf       
IPR011072   HR1_rho-bd       
IPR036274   HR1_rpt_sf       
IPR037313   PKN_HR1_1       
IPR011129   CSD       
IPR002059   CSP_DNA-bd       
IPR012340   NA-bd_OB-fold       

SUPFAM

SSF74788   SSF74788        + More
SSF46585   SSF46585       
SSF50249   SSF50249       

CDD

cd11622  HR1_PKN_1
cd04458  CSP_CDS

ProteinModelPortal

A0A2A4K721   A0A2H1VCY8   A0A1E1VZ28   A0A194QMB5   H9J0D8   A0A194PRI0   + More
A0A212EK59   D6WE56   A0A067RCD7   A0A1W4XTB0   A0A158N8W7   A0A195B4M4   A0A2J7RK71   A0A195FP13   A0A151J0D6   A0A1W4XU77   F4WMN4   A0A026W603   A0A3L8DB65   E2AIA7   A0A1Y1KXQ7   A0A1I8NBV2   A0A1I8NN97   T1PIK2   A0A088AU02   A0A0N0U6E8   A0A2A3E4A3   A0A0L0C1L7   A0A0L7QZV6   E2C0I0   A0A195CU49   A0A310SN24   W8AYX1   A0A0A1WYV4   A0A0J9R8U4   A0A0K8VGX9   Q9V564   B4HSQ6   A0A1W4UY24   B4J7Y0   B3N2A1   A0A0M3QV97   B4P403   B4LJ86   B4KPP7   A0A034VI89   B3N7I4   B4NNA7   E9J7W7   B4GHR6   Q28ZH5   W5JX60   A0A182K7T9   K7J084   A0A232FJP8   Q7QJN1   A0A2M4ANH0   A0A182I3K4   A0A2M4BHF4   A0A182XZ54   A0A1W4XJ68   A0A182X3G3   A0A182URD1   A0A182TW01   A0A1B0ABU7   D3TMS7   A0A182QEM4   A0A182JAU9   A0A182WIL9   A0A182LWZ2   A0A1A9UZ39   A0A1A9X3N5   A0A182FI63   A0A154P8Q6   A0A084VWX6   A0A1Q3F6J5   A0A2M4BIA3   A0A0J7N695   A0A2M4BIA5   A0A182P3P1   A0A1B0DFS2   A0A1A9YML4   A0A1B0BYX5   A0A1L8DW82   A0A1B0CU27   A0A0P4VXK5   A0A023F0A6   A0A069DVG5   A0A182GMB1   A0A182NHH5   B0VZV1   A0A182GST4   A0A0P5ZFL6   A0A0V0G4J8   A0A0P5NAP9   A0A1S4EZ30   Q17KR7   E9GI72  

KEGG

101743607    K20293 conserved oligomeric Golgi complex subunit 6 | (RefSeq) conserved oligomeric Golgi complex su

GO

GO:0000139   GO:0017119   GO:0015031   GO:0006891   GO:0004674   GO:0017049   GO:0007165   GO:0003676   GO:0033179   GO:0006730   GO:0006412   GO:0005739   GO:0006635   GO:0016507   GO:0048384  

PANTHER

PTHR21506  

Subcellular location

Golgi apparatus membrane  

Length:

620

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04864

Exp number, first 60 AAs:

0.00038

Total prob of N-in:

0.00264

outside

1  -  620

 

 

Pi

244.159162

Theta

182.884739

Tajima's D

0.652439

CLR

0.208409

CSRT

0.55957202139893

Interpretation

Uncertain